Protein–RNA interactions for Protein: B5KM66

Syce3, Synaptonemal complex central element protein 3, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syce3B5KM66 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Syce3B5KM66 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Syce3B5KM66 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC20.57■□□□□ 0.88
Syce3B5KM66 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Syce3B5KM66 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Syce3B5KM66 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Syce3B5KM66 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Syce3B5KM66 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Syce3B5KM66 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Syce3B5KM66 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Syce3B5KM66 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Syce3B5KM66 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Syce3B5KM66 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Syce3B5KM66 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Syce3B5KM66 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Syce3B5KM66 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Syce3B5KM66 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
Syce3B5KM66 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Syce3B5KM66 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Syce3B5KM66 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Syce3B5KM66 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Syce3B5KM66 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC20.56■□□□□ 0.88
Syce3B5KM66 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Syce3B5KM66 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Syce3B5KM66 Gm43672-201ENSMUST00000199072 1731 ntBASIC20.56■□□□□ 0.88
Syce3B5KM66 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Syce3B5KM66 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Syce3B5KM66 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Syce3B5KM66 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Syce3B5KM66 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Syce3B5KM66 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Syce3B5KM66 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Syce3B5KM66 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC20.55■□□□□ 0.88
Syce3B5KM66 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Syce3B5KM66 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Syce3B5KM66 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Syce3B5KM66 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Syce3B5KM66 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Syce3B5KM66 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Syce3B5KM66 Gm10461-201ENSMUST00000202073 4786 ntBASIC20.54■□□□□ 0.88
Syce3B5KM66 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Syce3B5KM66 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Syce3B5KM66 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Syce3B5KM66 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Syce3B5KM66 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Syce3B5KM66 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Syce3B5KM66 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.54■□□□□ 0.88
Syce3B5KM66 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Syce3B5KM66 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Syce3B5KM66 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Syce3B5KM66 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Syce3B5KM66 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Syce3B5KM66 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Syce3B5KM66 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Syce3B5KM66 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Syce3B5KM66 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Syce3B5KM66 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
Syce3B5KM66 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Syce3B5KM66 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Syce3B5KM66 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Syce3B5KM66 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.53■□□□□ 0.88
Syce3B5KM66 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Syce3B5KM66 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Syce3B5KM66 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Syce3B5KM66 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Syce3B5KM66 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Syce3B5KM66 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Syce3B5KM66 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Syce3B5KM66 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Syce3B5KM66 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Syce3B5KM66 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC20.52■□□□□ 0.88
Syce3B5KM66 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Syce3B5KM66 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.52■□□□□ 0.88
Syce3B5KM66 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Syce3B5KM66 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.52■□□□□ 0.88
Syce3B5KM66 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Syce3B5KM66 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.52■□□□□ 0.88
Syce3B5KM66 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Syce3B5KM66 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Syce3B5KM66 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Syce3B5KM66 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Syce3B5KM66 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
Syce3B5KM66 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Syce3B5KM66 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Syce3B5KM66 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Syce3B5KM66 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Syce3B5KM66 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Syce3B5KM66 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.51■□□□□ 0.87
Syce3B5KM66 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Syce3B5KM66 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Syce3B5KM66 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Syce3B5KM66 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Syce3B5KM66 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Syce3B5KM66 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Syce3B5KM66 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Syce3B5KM66 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC20.51■□□□□ 0.87
Syce3B5KM66 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Syce3B5KM66 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Syce3B5KM66 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Syce3B5KM66 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms