Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Clrn2B2RVW2 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Clrn2B2RVW2 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Clrn2B2RVW2 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Clrn2B2RVW2 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Clrn2B2RVW2 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Clrn2B2RVW2 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Clrn2B2RVW2 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Clrn2B2RVW2 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Clrn2B2RVW2 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Clrn2B2RVW2 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Clrn2B2RVW2 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Clrn2B2RVW2 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Clrn2B2RVW2 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Clrn2B2RVW2 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Clrn2B2RVW2 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Clrn2B2RVW2 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC20.81■□□□□ 0.92
Clrn2B2RVW2 Gm6345-202ENSMUST00000180900 204 ntBASIC20.81■□□□□ 0.92
Clrn2B2RVW2 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Clrn2B2RVW2 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC20.81■□□□□ 0.92
Clrn2B2RVW2 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Clrn2B2RVW2 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Clrn2B2RVW2 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Clrn2B2RVW2 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Clrn2B2RVW2 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Clrn2B2RVW2 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Clrn2B2RVW2 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Clrn2B2RVW2 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Clrn2B2RVW2 Gm9194-201ENSMUST00000220749 1447 ntBASIC20.8■□□□□ 0.92
Clrn2B2RVW2 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Clrn2B2RVW2 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Clrn2B2RVW2 AA414768-201ENSMUST00000121924 1257 ntBASIC20.8■□□□□ 0.92
Clrn2B2RVW2 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC20.8■□□□□ 0.92
Clrn2B2RVW2 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Clrn2B2RVW2 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Clrn2B2RVW2 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Clrn2B2RVW2 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Clrn2B2RVW2 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Clrn2B2RVW2 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC20.79■□□□□ 0.92
Clrn2B2RVW2 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Clrn2B2RVW2 Gm2274-201ENSMUST00000184539 609 ntBASIC20.79■□□□□ 0.92
Clrn2B2RVW2 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Clrn2B2RVW2 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Clrn2B2RVW2 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Clrn2B2RVW2 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Clrn2B2RVW2 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC20.79■□□□□ 0.92
Clrn2B2RVW2 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Clrn2B2RVW2 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Clrn2B2RVW2 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Clrn2B2RVW2 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Clrn2B2RVW2 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Clrn2B2RVW2 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Clrn2B2RVW2 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Clrn2B2RVW2 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Clrn2B2RVW2 Gm4217-201ENSMUST00000182243 1002 ntBASIC20.78■□□□□ 0.92
Clrn2B2RVW2 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Clrn2B2RVW2 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Clrn2B2RVW2 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Clrn2B2RVW2 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Clrn2B2RVW2 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Clrn2B2RVW2 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Clrn2B2RVW2 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Clrn2B2RVW2 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Clrn2B2RVW2 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Clrn2B2RVW2 Gm38308-201ENSMUST00000194934 1809 ntBASIC20.77■□□□□ 0.92
Clrn2B2RVW2 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Clrn2B2RVW2 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC20.77■□□□□ 0.92
Clrn2B2RVW2 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Clrn2B2RVW2 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Clrn2B2RVW2 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Clrn2B2RVW2 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Clrn2B2RVW2 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Clrn2B2RVW2 Gm42922-201ENSMUST00000195887 2078 ntBASIC20.76■□□□□ 0.91
Clrn2B2RVW2 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Clrn2B2RVW2 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Clrn2B2RVW2 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Clrn2B2RVW2 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Clrn2B2RVW2 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Clrn2B2RVW2 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Clrn2B2RVW2 Gm37820-201ENSMUST00000194021 2147 ntBASIC20.76■□□□□ 0.91
Clrn2B2RVW2 Gm4974-201ENSMUST00000209974 875 ntBASIC20.76■□□□□ 0.91
Clrn2B2RVW2 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Clrn2B2RVW2 AC121961.1-201ENSMUST00000218594 1779 ntBASIC20.76■□□□□ 0.91
Clrn2B2RVW2 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Clrn2B2RVW2 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Clrn2B2RVW2 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.75■□□□□ 0.91
Clrn2B2RVW2 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Clrn2B2RVW2 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Clrn2B2RVW2 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Clrn2B2RVW2 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC20.75■□□□□ 0.91
Clrn2B2RVW2 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC20.75■□□□□ 0.91
Clrn2B2RVW2 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Clrn2B2RVW2 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC20.75■□□□□ 0.91
Clrn2B2RVW2 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Clrn2B2RVW2 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Clrn2B2RVW2 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
Clrn2B2RVW2 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Clrn2B2RVW2 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Clrn2B2RVW2 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Clrn2B2RVW2 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms