Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Gm12887B1AVM1 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Gm12887B1AVM1 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Gm12887B1AVM1 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Gm12887B1AVM1 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Gm12887B1AVM1 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Gm12887B1AVM1 Gm7160-202ENSMUST00000188519 1027 ntBASIC14.55□□□□□ -0.08
Gm12887B1AVM1 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Gm12887B1AVM1 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
Gm12887B1AVM1 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Gm12887B1AVM1 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Gm12887B1AVM1 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Gm12887B1AVM1 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Gm12887B1AVM1 AC165080.2-201ENSMUST00000217491 1530 ntBASIC14.55□□□□□ -0.08
Gm12887B1AVM1 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Gm12887B1AVM1 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC14.55□□□□□ -0.08
Gm12887B1AVM1 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Gm12887B1AVM1 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Gm12887B1AVM1 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gm12887B1AVM1 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Gm12887B1AVM1 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gm12887B1AVM1 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gm12887B1AVM1 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gm12887B1AVM1 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC14.54□□□□□ -0.08
Gm12887B1AVM1 AC137127.1-201ENSMUST00000213466 1078 ntBASIC14.54□□□□□ -0.08
Gm12887B1AVM1 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gm12887B1AVM1 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gm12887B1AVM1 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Gm12887B1AVM1 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gm12887B1AVM1 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Gm12887B1AVM1 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC14.54□□□□□ -0.08
Gm12887B1AVM1 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Gm12887B1AVM1 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gm12887B1AVM1 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gm12887B1AVM1 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gm12887B1AVM1 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gm12887B1AVM1 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gm12887B1AVM1 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gm12887B1AVM1 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gm12887B1AVM1 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gm12887B1AVM1 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
Gm12887B1AVM1 Gm10167-201ENSMUST00000150411 1479 ntBASIC14.53□□□□□ -0.08
Gm12887B1AVM1 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gm12887B1AVM1 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Gm12887B1AVM1 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC14.53□□□□□ -0.08
Gm12887B1AVM1 Gm27032-201ENSMUST00000183124 1116 ntBASIC14.53□□□□□ -0.08
Gm12887B1AVM1 Gm19094-201ENSMUST00000209791 1246 ntBASIC14.53□□□□□ -0.08
Gm12887B1AVM1 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Gm12887B1AVM1 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Gm12887B1AVM1 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Gm12887B1AVM1 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gm12887B1AVM1 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Gm12887B1AVM1 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gm12887B1AVM1 Gm43808-201ENSMUST00000202534 2065 ntBASIC14.53□□□□□ -0.08
Gm12887B1AVM1 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC14.53□□□□□ -0.08
Gm12887B1AVM1 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Gm12887B1AVM1 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Gm12887B1AVM1 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC14.52□□□□□ -0.08
Gm12887B1AVM1 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Gm12887B1AVM1 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Gm12887B1AVM1 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Gm12887B1AVM1 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
Gm12887B1AVM1 Gm15546-201ENSMUST00000122095 826 ntBASIC14.52□□□□□ -0.09
Gm12887B1AVM1 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC14.52□□□□□ -0.09
Gm12887B1AVM1 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC14.52□□□□□ -0.09
Gm12887B1AVM1 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Gm12887B1AVM1 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Gm12887B1AVM1 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Gm12887B1AVM1 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Gm12887B1AVM1 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Gm12887B1AVM1 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Gm12887B1AVM1 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Gm12887B1AVM1 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Gm12887B1AVM1 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Gm12887B1AVM1 Gm43672-201ENSMUST00000199072 1731 ntBASIC14.52□□□□□ -0.09
Gm12887B1AVM1 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC14.52□□□□□ -0.09
Gm12887B1AVM1 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Gm12887B1AVM1 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Gm12887B1AVM1 Gm15743-202ENSMUST00000182690 1901 ntBASIC14.51□□□□□ -0.09
Gm12887B1AVM1 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Gm12887B1AVM1 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Gm12887B1AVM1 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC14.51□□□□□ -0.09
Gm12887B1AVM1 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Gm12887B1AVM1 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC14.51□□□□□ -0.09
Gm12887B1AVM1 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC14.51□□□□□ -0.09
Gm12887B1AVM1 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Gm12887B1AVM1 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Gm12887B1AVM1 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Gm12887B1AVM1 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Gm12887B1AVM1 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Gm12887B1AVM1 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Gm12887B1AVM1 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Gm12887B1AVM1 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
Gm12887B1AVM1 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Gm12887B1AVM1 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Gm12887B1AVM1 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Gm12887B1AVM1 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Gm12887B1AVM1 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Gm12887B1AVM1 Gm5812-201ENSMUST00000061073 957 ntBASIC14.5□□□□□ -0.09
Gm12887B1AVM1 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms