Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scn1aA2APX8 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scn1aA2APX8 Mir7071-201ENSMUST00000184847 69 ntBASIC18.86■□□□□ 0.61
Scn1aA2APX8 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scn1aA2APX8 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Scn1aA2APX8 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scn1aA2APX8 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scn1aA2APX8 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scn1aA2APX8 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scn1aA2APX8 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC18.86■□□□□ 0.61
Scn1aA2APX8 Arhgef4-208ENSMUST00000211073 171 ntBASIC18.86■□□□□ 0.61
Scn1aA2APX8 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Scn1aA2APX8 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Scn1aA2APX8 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Scn1aA2APX8 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.86■□□□□ 0.61
Scn1aA2APX8 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Scn1aA2APX8 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scn1aA2APX8 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.85■□□□□ 0.61
Scn1aA2APX8 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Scn1aA2APX8 Gm15565-201ENSMUST00000118890 427 ntBASIC18.85■□□□□ 0.61
Scn1aA2APX8 Gm3375-201ENSMUST00000203929 796 ntBASIC18.85■□□□□ 0.61
Scn1aA2APX8 AC166341.7-201ENSMUST00000221698 126 ntBASIC18.85■□□□□ 0.61
Scn1aA2APX8 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scn1aA2APX8 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scn1aA2APX8 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Scn1aA2APX8 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scn1aA2APX8 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scn1aA2APX8 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scn1aA2APX8 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Scn1aA2APX8 Idnk-204ENSMUST00000226010 1898 ntBASIC18.85■□□□□ 0.61
Scn1aA2APX8 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.85■□□□□ 0.61
Scn1aA2APX8 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
Scn1aA2APX8 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.84■□□□□ 0.61
Scn1aA2APX8 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scn1aA2APX8 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scn1aA2APX8 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scn1aA2APX8 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Scn1aA2APX8 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Scn1aA2APX8 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Scn1aA2APX8 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Scn1aA2APX8 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Scn1aA2APX8 Gm21814-202ENSMUST00000203277 873 ntBASIC18.84■□□□□ 0.61
Scn1aA2APX8 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
Scn1aA2APX8 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.84■□□□□ 0.61
Scn1aA2APX8 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scn1aA2APX8 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scn1aA2APX8 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scn1aA2APX8 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scn1aA2APX8 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scn1aA2APX8 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.84■□□□□ 0.61
Scn1aA2APX8 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Scn1aA2APX8 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scn1aA2APX8 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.84■□□□□ 0.61
Scn1aA2APX8 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Scn1aA2APX8 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Scn1aA2APX8 Gm10418-201ENSMUST00000100943 576 ntBASIC18.83■□□□□ 0.61
Scn1aA2APX8 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Scn1aA2APX8 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.83■□□□□ 0.61
Scn1aA2APX8 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
Scn1aA2APX8 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Scn1aA2APX8 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Scn1aA2APX8 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Scn1aA2APX8 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Scn1aA2APX8 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Scn1aA2APX8 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC18.83■□□□□ 0.6
Scn1aA2APX8 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Scn1aA2APX8 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Scn1aA2APX8 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.83■□□□□ 0.6
Scn1aA2APX8 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.83■□□□□ 0.6
Scn1aA2APX8 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Scn1aA2APX8 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC18.83■□□□□ 0.6
Scn1aA2APX8 Timm23-208ENSMUST00000226683 750 ntBASIC18.83■□□□□ 0.6
Scn1aA2APX8 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Scn1aA2APX8 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Scn1aA2APX8 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Scn1aA2APX8 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Scn1aA2APX8 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Scn1aA2APX8 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.83■□□□□ 0.6
Scn1aA2APX8 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Scn1aA2APX8 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scn1aA2APX8 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Scn1aA2APX8 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scn1aA2APX8 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.82■□□□□ 0.6
Scn1aA2APX8 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scn1aA2APX8 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scn1aA2APX8 Grk6-206ENSMUST00000224995 2971 ntBASIC18.82■□□□□ 0.6
Scn1aA2APX8 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scn1aA2APX8 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Scn1aA2APX8 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scn1aA2APX8 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scn1aA2APX8 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC18.82■□□□□ 0.6
Scn1aA2APX8 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scn1aA2APX8 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Scn1aA2APX8 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scn1aA2APX8 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scn1aA2APX8 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC18.81■□□□□ 0.6
Scn1aA2APX8 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Scn1aA2APX8 Gm20472-201ENSMUST00000174403 1240 ntBASIC18.81■□□□□ 0.6
Scn1aA2APX8 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Scn1aA2APX8 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms