Protein–RNA interactions for Protein: A0A140T8Q0

Igkv3-3, Immunoglobulin kappa variable 3-3 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-3A0A140T8Q0 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC10.86□□□□□ -0.67
Igkv3-3A0A140T8Q0 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC10.86□□□□□ -0.67
Igkv3-3A0A140T8Q0 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Igkv3-3A0A140T8Q0 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Igkv3-3A0A140T8Q0 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Igkv3-3A0A140T8Q0 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Igkv3-3A0A140T8Q0 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Igkv3-3A0A140T8Q0 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Igkv3-3A0A140T8Q0 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
Igkv3-3A0A140T8Q0 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Igkv3-3A0A140T8Q0 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Igkv3-3A0A140T8Q0 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Igkv3-3A0A140T8Q0 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Igkv3-3A0A140T8Q0 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Igkv3-3A0A140T8Q0 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Igkv3-3A0A140T8Q0 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Igkv3-3A0A140T8Q0 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Igkv3-3A0A140T8Q0 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Igkv3-3A0A140T8Q0 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Igkv3-3A0A140T8Q0 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Igkv3-3A0A140T8Q0 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Igkv3-3A0A140T8Q0 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC10.85□□□□□ -0.67
Igkv3-3A0A140T8Q0 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC10.85□□□□□ -0.67
Igkv3-3A0A140T8Q0 Gm8770-201ENSMUST00000121113 1109 ntBASIC10.85□□□□□ -0.67
Igkv3-3A0A140T8Q0 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Igkv3-3A0A140T8Q0 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Igkv3-3A0A140T8Q0 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Igkv3-3A0A140T8Q0 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Igkv3-3A0A140T8Q0 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Igkv3-3A0A140T8Q0 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Igkv3-3A0A140T8Q0 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Igkv3-3A0A140T8Q0 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Igkv3-3A0A140T8Q0 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Igkv3-3A0A140T8Q0 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Igkv3-3A0A140T8Q0 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Igkv3-3A0A140T8Q0 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Igkv3-3A0A140T8Q0 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Igkv3-3A0A140T8Q0 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Igkv3-3A0A140T8Q0 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Igkv3-3A0A140T8Q0 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Igkv3-3A0A140T8Q0 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Igkv3-3A0A140T8Q0 AC123834.2-201ENSMUST00000224038 2340 ntBASIC10.84□□□□□ -0.67
Igkv3-3A0A140T8Q0 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Igkv3-3A0A140T8Q0 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Igkv3-3A0A140T8Q0 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Igkv3-3A0A140T8Q0 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC10.84□□□□□ -0.67
Igkv3-3A0A140T8Q0 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC10.84□□□□□ -0.67
Igkv3-3A0A140T8Q0 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Igkv3-3A0A140T8Q0 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC10.84□□□□□ -0.67
Igkv3-3A0A140T8Q0 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC10.84□□□□□ -0.67
Igkv3-3A0A140T8Q0 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Igkv3-3A0A140T8Q0 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
Igkv3-3A0A140T8Q0 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Igkv3-3A0A140T8Q0 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Igkv3-3A0A140T8Q0 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Igkv3-3A0A140T8Q0 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Igkv3-3A0A140T8Q0 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Igkv3-3A0A140T8Q0 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Igkv3-3A0A140T8Q0 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Igkv3-3A0A140T8Q0 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Igkv3-3A0A140T8Q0 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Igkv3-3A0A140T8Q0 Gm27045-201ENSMUST00000182145 1402 ntBASIC10.84□□□□□ -0.67
Igkv3-3A0A140T8Q0 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.67
Igkv3-3A0A140T8Q0 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Igkv3-3A0A140T8Q0 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Igkv3-3A0A140T8Q0 Dmtn-210ENSMUST00000228824 2377 ntBASIC10.83□□□□□ -0.68
Igkv3-3A0A140T8Q0 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Igkv3-3A0A140T8Q0 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Igkv3-3A0A140T8Q0 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Igkv3-3A0A140T8Q0 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Igkv3-3A0A140T8Q0 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Igkv3-3A0A140T8Q0 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Igkv3-3A0A140T8Q0 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Igkv3-3A0A140T8Q0 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Igkv3-3A0A140T8Q0 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC10.83□□□□□ -0.68
Igkv3-3A0A140T8Q0 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Igkv3-3A0A140T8Q0 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC10.83□□□□□ -0.68
Igkv3-3A0A140T8Q0 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Igkv3-3A0A140T8Q0 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Igkv3-3A0A140T8Q0 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Igkv3-3A0A140T8Q0 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Igkv3-3A0A140T8Q0 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Igkv3-3A0A140T8Q0 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Igkv3-3A0A140T8Q0 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Igkv3-3A0A140T8Q0 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Igkv3-3A0A140T8Q0 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Igkv3-3A0A140T8Q0 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Igkv3-3A0A140T8Q0 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Igkv3-3A0A140T8Q0 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Igkv3-3A0A140T8Q0 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Igkv3-3A0A140T8Q0 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Igkv3-3A0A140T8Q0 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Igkv3-3A0A140T8Q0 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igkv3-3A0A140T8Q0 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igkv3-3A0A140T8Q0 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Igkv3-3A0A140T8Q0 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igkv3-3A0A140T8Q0 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igkv3-3A0A140T8Q0 Gm6085-201ENSMUST00000182774 1470 ntBASIC10.82□□□□□ -0.68
Igkv3-3A0A140T8Q0 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Igkv3-3A0A140T8Q0 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms