Protein–RNA interactions for Protein: A0A0U1RP08

1700028J19Rik, RIKEN cDNA 1700028J19 gene (Fragment), mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
1700028J19RikA0A0U1RP08 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.87■□□□□ 0.29
1700028J19RikA0A0U1RP08 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
1700028J19RikA0A0U1RP08 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC16.87■□□□□ 0.29
1700028J19RikA0A0U1RP08 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
1700028J19RikA0A0U1RP08 AC140264.2-202ENSMUST00000218746 817 ntBASIC16.87■□□□□ 0.29
1700028J19RikA0A0U1RP08 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC16.87■□□□□ 0.29
1700028J19RikA0A0U1RP08 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
1700028J19RikA0A0U1RP08 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
1700028J19RikA0A0U1RP08 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
1700028J19RikA0A0U1RP08 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC16.87■□□□□ 0.29
1700028J19RikA0A0U1RP08 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
1700028J19RikA0A0U1RP08 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
1700028J19RikA0A0U1RP08 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
1700028J19RikA0A0U1RP08 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.86■□□□□ 0.29
1700028J19RikA0A0U1RP08 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC16.86■□□□□ 0.29
1700028J19RikA0A0U1RP08 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
1700028J19RikA0A0U1RP08 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
1700028J19RikA0A0U1RP08 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
1700028J19RikA0A0U1RP08 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
1700028J19RikA0A0U1RP08 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
1700028J19RikA0A0U1RP08 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
1700028J19RikA0A0U1RP08 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.86■□□□□ 0.29
1700028J19RikA0A0U1RP08 Gm8969-201ENSMUST00000199694 526 ntBASIC16.86■□□□□ 0.29
1700028J19RikA0A0U1RP08 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
1700028J19RikA0A0U1RP08 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
1700028J19RikA0A0U1RP08 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
1700028J19RikA0A0U1RP08 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
1700028J19RikA0A0U1RP08 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
1700028J19RikA0A0U1RP08 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.86■□□□□ 0.29
1700028J19RikA0A0U1RP08 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
1700028J19RikA0A0U1RP08 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
1700028J19RikA0A0U1RP08 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
1700028J19RikA0A0U1RP08 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC16.85■□□□□ 0.29
1700028J19RikA0A0U1RP08 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC16.85■□□□□ 0.29
1700028J19RikA0A0U1RP08 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
1700028J19RikA0A0U1RP08 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
1700028J19RikA0A0U1RP08 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
1700028J19RikA0A0U1RP08 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
1700028J19RikA0A0U1RP08 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.85■□□□□ 0.29
1700028J19RikA0A0U1RP08 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
1700028J19RikA0A0U1RP08 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
1700028J19RikA0A0U1RP08 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
1700028J19RikA0A0U1RP08 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
1700028J19RikA0A0U1RP08 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
1700028J19RikA0A0U1RP08 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
1700028J19RikA0A0U1RP08 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
1700028J19RikA0A0U1RP08 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC16.84■□□□□ 0.29
1700028J19RikA0A0U1RP08 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC16.84■□□□□ 0.29
1700028J19RikA0A0U1RP08 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC16.84■□□□□ 0.29
1700028J19RikA0A0U1RP08 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC16.84■□□□□ 0.29
1700028J19RikA0A0U1RP08 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
1700028J19RikA0A0U1RP08 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
1700028J19RikA0A0U1RP08 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
1700028J19RikA0A0U1RP08 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
1700028J19RikA0A0U1RP08 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
1700028J19RikA0A0U1RP08 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
1700028J19RikA0A0U1RP08 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
1700028J19RikA0A0U1RP08 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
1700028J19RikA0A0U1RP08 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
1700028J19RikA0A0U1RP08 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
1700028J19RikA0A0U1RP08 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC16.83■□□□□ 0.29
1700028J19RikA0A0U1RP08 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
1700028J19RikA0A0U1RP08 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.83■□□□□ 0.29
1700028J19RikA0A0U1RP08 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
1700028J19RikA0A0U1RP08 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
1700028J19RikA0A0U1RP08 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
1700028J19RikA0A0U1RP08 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
1700028J19RikA0A0U1RP08 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC16.83■□□□□ 0.28
1700028J19RikA0A0U1RP08 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC16.83■□□□□ 0.28
1700028J19RikA0A0U1RP08 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC16.83■□□□□ 0.28
1700028J19RikA0A0U1RP08 Fcho2-208ENSMUST00000224992 2964 ntBASIC16.83■□□□□ 0.28
1700028J19RikA0A0U1RP08 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
1700028J19RikA0A0U1RP08 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
1700028J19RikA0A0U1RP08 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
1700028J19RikA0A0U1RP08 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
1700028J19RikA0A0U1RP08 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
1700028J19RikA0A0U1RP08 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
1700028J19RikA0A0U1RP08 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
1700028J19RikA0A0U1RP08 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
1700028J19RikA0A0U1RP08 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
1700028J19RikA0A0U1RP08 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
1700028J19RikA0A0U1RP08 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
1700028J19RikA0A0U1RP08 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
1700028J19RikA0A0U1RP08 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
1700028J19RikA0A0U1RP08 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
1700028J19RikA0A0U1RP08 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
1700028J19RikA0A0U1RP08 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
1700028J19RikA0A0U1RP08 Gm15039-201ENSMUST00000118914 875 ntBASIC16.82■□□□□ 0.28
1700028J19RikA0A0U1RP08 Gm27405-201ENSMUST00000184201 112 ntBASIC16.82■□□□□ 0.28
1700028J19RikA0A0U1RP08 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
1700028J19RikA0A0U1RP08 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
1700028J19RikA0A0U1RP08 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
1700028J19RikA0A0U1RP08 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
1700028J19RikA0A0U1RP08 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
1700028J19RikA0A0U1RP08 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.82■□□□□ 0.28
1700028J19RikA0A0U1RP08 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
1700028J19RikA0A0U1RP08 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
1700028J19RikA0A0U1RP08 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.82■□□□□ 0.28
1700028J19RikA0A0U1RP08 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
1700028J19RikA0A0U1RP08 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms