Protein–RNA interactions for Protein: A0A0J9YTW6

Scn2a, Sodium channel protein, mousemouse

Predictions only

Length 2,006 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2aA0A0J9YTW6 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Scn2aA0A0J9YTW6 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC16.48■□□□□ 0.23
Scn2aA0A0J9YTW6 H2-K2-201ENSMUST00000174250 1049 ntBASIC16.48■□□□□ 0.23
Scn2aA0A0J9YTW6 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scn2aA0A0J9YTW6 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scn2aA0A0J9YTW6 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
Scn2aA0A0J9YTW6 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Scn2aA0A0J9YTW6 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scn2aA0A0J9YTW6 CT010444.2-201ENSMUST00000217877 1629 ntBASIC16.48■□□□□ 0.23
Scn2aA0A0J9YTW6 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Scn2aA0A0J9YTW6 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Scn2aA0A0J9YTW6 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scn2aA0A0J9YTW6 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scn2aA0A0J9YTW6 Gm715-201ENSMUST00000117865 831 ntBASIC16.48■□□□□ 0.23
Scn2aA0A0J9YTW6 Gm15378-201ENSMUST00000121894 207 ntBASIC16.48■□□□□ 0.23
Scn2aA0A0J9YTW6 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Scn2aA0A0J9YTW6 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC16.48■□□□□ 0.23
Scn2aA0A0J9YTW6 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scn2aA0A0J9YTW6 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scn2aA0A0J9YTW6 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scn2aA0A0J9YTW6 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scn2aA0A0J9YTW6 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Scn2aA0A0J9YTW6 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Scn2aA0A0J9YTW6 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Scn2aA0A0J9YTW6 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scn2aA0A0J9YTW6 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scn2aA0A0J9YTW6 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scn2aA0A0J9YTW6 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC16.47■□□□□ 0.23
Scn2aA0A0J9YTW6 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scn2aA0A0J9YTW6 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Scn2aA0A0J9YTW6 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Scn2aA0A0J9YTW6 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Scn2aA0A0J9YTW6 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC16.46■□□□□ 0.23
Scn2aA0A0J9YTW6 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Scn2aA0A0J9YTW6 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC16.46■□□□□ 0.23
Scn2aA0A0J9YTW6 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scn2aA0A0J9YTW6 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.46■□□□□ 0.23
Scn2aA0A0J9YTW6 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.46■□□□□ 0.23
Scn2aA0A0J9YTW6 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scn2aA0A0J9YTW6 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scn2aA0A0J9YTW6 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scn2aA0A0J9YTW6 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC16.46■□□□□ 0.23
Scn2aA0A0J9YTW6 Mir1199-201ENSMUST00000117015 119 ntBASIC16.46■□□□□ 0.23
Scn2aA0A0J9YTW6 Gm13181-201ENSMUST00000120117 1069 ntBASIC16.46■□□□□ 0.23
Scn2aA0A0J9YTW6 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Scn2aA0A0J9YTW6 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Scn2aA0A0J9YTW6 Gm45560-201ENSMUST00000211492 1472 ntBASIC16.46■□□□□ 0.23
Scn2aA0A0J9YTW6 Tgds-204ENSMUST00000228543 1594 ntBASIC16.46■□□□□ 0.23
Scn2aA0A0J9YTW6 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
Scn2aA0A0J9YTW6 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Scn2aA0A0J9YTW6 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.46■□□□□ 0.22
Scn2aA0A0J9YTW6 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Scn2aA0A0J9YTW6 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scn2aA0A0J9YTW6 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scn2aA0A0J9YTW6 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scn2aA0A0J9YTW6 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC16.45■□□□□ 0.22
Scn2aA0A0J9YTW6 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scn2aA0A0J9YTW6 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Scn2aA0A0J9YTW6 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scn2aA0A0J9YTW6 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC16.45■□□□□ 0.22
Scn2aA0A0J9YTW6 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Scn2aA0A0J9YTW6 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Scn2aA0A0J9YTW6 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scn2aA0A0J9YTW6 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Scn2aA0A0J9YTW6 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scn2aA0A0J9YTW6 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.45■□□□□ 0.22
Scn2aA0A0J9YTW6 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Scn2aA0A0J9YTW6 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scn2aA0A0J9YTW6 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC16.45■□□□□ 0.22
Scn2aA0A0J9YTW6 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scn2aA0A0J9YTW6 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scn2aA0A0J9YTW6 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Scn2aA0A0J9YTW6 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.44■□□□□ 0.22
Scn2aA0A0J9YTW6 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scn2aA0A0J9YTW6 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scn2aA0A0J9YTW6 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scn2aA0A0J9YTW6 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Scn2aA0A0J9YTW6 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Scn2aA0A0J9YTW6 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Scn2aA0A0J9YTW6 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scn2aA0A0J9YTW6 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scn2aA0A0J9YTW6 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Scn2aA0A0J9YTW6 Mir6349-201ENSMUST00000184059 97 ntBASIC16.44■□□□□ 0.22
Scn2aA0A0J9YTW6 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC16.44■□□□□ 0.22
Scn2aA0A0J9YTW6 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scn2aA0A0J9YTW6 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Scn2aA0A0J9YTW6 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scn2aA0A0J9YTW6 Gm15375-201ENSMUST00000119510 849 ntBASIC16.43■□□□□ 0.22
Scn2aA0A0J9YTW6 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Scn2aA0A0J9YTW6 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scn2aA0A0J9YTW6 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scn2aA0A0J9YTW6 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC16.43■□□□□ 0.22
Scn2aA0A0J9YTW6 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
Scn2aA0A0J9YTW6 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
Scn2aA0A0J9YTW6 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scn2aA0A0J9YTW6 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scn2aA0A0J9YTW6 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC16.43■□□□□ 0.22
Scn2aA0A0J9YTW6 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
Scn2aA0A0J9YTW6 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC16.43■□□□□ 0.22
Scn2aA0A0J9YTW6 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms