Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Gm5828-201ENSMUST00000071842 1860 ntBASIC12.38□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC12.38□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC12.38□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC12.38□□□□□ -0.43
Trav13d-4A0A0G2JFX3 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC12.38□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC12.38□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC12.38□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13d-4A0A0G2JFX3 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13d-4A0A0G2JFX3 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Gm38308-201ENSMUST00000194934 1809 ntBASIC12.37□□□□□ -0.43
Trav13d-4A0A0G2JFX3 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC12.37□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC12.36□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13d-4A0A0G2JFX3 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trav13d-4A0A0G2JFX3 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC12.36□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC12.36□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Gm9194-201ENSMUST00000220749 1447 ntBASIC12.36□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC12.35□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Gm14281-201ENSMUST00000121700 1294 ntBASIC12.35□□□□□ -0.43
Trav13d-4A0A0G2JFX3 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13d-4A0A0G2JFX3 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC12.35□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav13d-4A0A0G2JFX3 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms