Protein–RNA interactions for Protein: A0A0B4J1H5

Trbv20, T cell receptor beta, variable 20 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv20A0A0B4J1H5 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv20A0A0B4J1H5 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv20A0A0B4J1H5 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv20A0A0B4J1H5 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv20A0A0B4J1H5 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Trbv20A0A0B4J1H5 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv20A0A0B4J1H5 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv20A0A0B4J1H5 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv20A0A0B4J1H5 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv20A0A0B4J1H5 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv20A0A0B4J1H5 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv20A0A0B4J1H5 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv20A0A0B4J1H5 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trbv20A0A0B4J1H5 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Trbv20A0A0B4J1H5 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv20A0A0B4J1H5 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv20A0A0B4J1H5 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv20A0A0B4J1H5 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Trbv20A0A0B4J1H5 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv20A0A0B4J1H5 Gm12251-201ENSMUST00000117893 792 ntBASIC16.09■□□□□ 0.17
Trbv20A0A0B4J1H5 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Trbv20A0A0B4J1H5 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv20A0A0B4J1H5 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv20A0A0B4J1H5 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv20A0A0B4J1H5 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Trbv20A0A0B4J1H5 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv20A0A0B4J1H5 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv20A0A0B4J1H5 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv20A0A0B4J1H5 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv20A0A0B4J1H5 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbv20A0A0B4J1H5 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Trbv20A0A0B4J1H5 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trbv20A0A0B4J1H5 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.08■□□□□ 0.17
Trbv20A0A0B4J1H5 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trbv20A0A0B4J1H5 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.08■□□□□ 0.16
Trbv20A0A0B4J1H5 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trbv20A0A0B4J1H5 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trbv20A0A0B4J1H5 Gm12922-201ENSMUST00000120626 809 ntBASIC16.08■□□□□ 0.16
Trbv20A0A0B4J1H5 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC16.08■□□□□ 0.16
Trbv20A0A0B4J1H5 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trbv20A0A0B4J1H5 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trbv20A0A0B4J1H5 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trbv20A0A0B4J1H5 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC16.08■□□□□ 0.16
Trbv20A0A0B4J1H5 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trbv20A0A0B4J1H5 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trbv20A0A0B4J1H5 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trbv20A0A0B4J1H5 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv20A0A0B4J1H5 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv20A0A0B4J1H5 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv20A0A0B4J1H5 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv20A0A0B4J1H5 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv20A0A0B4J1H5 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.07■□□□□ 0.16
Trbv20A0A0B4J1H5 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv20A0A0B4J1H5 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv20A0A0B4J1H5 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Trbv20A0A0B4J1H5 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC16.07■□□□□ 0.16
Trbv20A0A0B4J1H5 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv20A0A0B4J1H5 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC16.07■□□□□ 0.16
Trbv20A0A0B4J1H5 Flvcr1-202ENSMUST00000191946 1216 ntBASIC16.07■□□□□ 0.16
Trbv20A0A0B4J1H5 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC16.07■□□□□ 0.16
Trbv20A0A0B4J1H5 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv20A0A0B4J1H5 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Trbv20A0A0B4J1H5 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv20A0A0B4J1H5 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv20A0A0B4J1H5 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC16.07■□□□□ 0.16
Trbv20A0A0B4J1H5 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv20A0A0B4J1H5 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbv20A0A0B4J1H5 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.07■□□□□ 0.16
Trbv20A0A0B4J1H5 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv20A0A0B4J1H5 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv20A0A0B4J1H5 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv20A0A0B4J1H5 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv20A0A0B4J1H5 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv20A0A0B4J1H5 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv20A0A0B4J1H5 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv20A0A0B4J1H5 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv20A0A0B4J1H5 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.06■□□□□ 0.16
Trbv20A0A0B4J1H5 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv20A0A0B4J1H5 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv20A0A0B4J1H5 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC16.06■□□□□ 0.16
Trbv20A0A0B4J1H5 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv20A0A0B4J1H5 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC16.06■□□□□ 0.16
Trbv20A0A0B4J1H5 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC16.06■□□□□ 0.16
Trbv20A0A0B4J1H5 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbv20A0A0B4J1H5 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv20A0A0B4J1H5 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv20A0A0B4J1H5 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.05■□□□□ 0.16
Trbv20A0A0B4J1H5 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv20A0A0B4J1H5 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv20A0A0B4J1H5 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC16.05■□□□□ 0.16
Trbv20A0A0B4J1H5 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv20A0A0B4J1H5 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv20A0A0B4J1H5 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Trbv20A0A0B4J1H5 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.05■□□□□ 0.16
Trbv20A0A0B4J1H5 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv20A0A0B4J1H5 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.05■□□□□ 0.16
Trbv20A0A0B4J1H5 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv20A0A0B4J1H5 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv20A0A0B4J1H5 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbv20A0A0B4J1H5 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms