Protein–RNA interactions for Protein: A0A0A6YW37

Ighv1-9, Immunoglobulin heavy variable V1-9 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-9A0A0A6YW37 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC13.53□□□□□ -0.24
Ighv1-9A0A0A6YW37 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC13.53□□□□□ -0.24
Ighv1-9A0A0A6YW37 Gm7514-201ENSMUST00000209475 934 ntBASIC13.53□□□□□ -0.24
Ighv1-9A0A0A6YW37 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Ighv1-9A0A0A6YW37 Gm18671-201ENSMUST00000214826 683 ntBASIC13.53□□□□□ -0.24
Ighv1-9A0A0A6YW37 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv1-9A0A0A6YW37 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv1-9A0A0A6YW37 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv1-9A0A0A6YW37 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv1-9A0A0A6YW37 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv1-9A0A0A6YW37 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC13.53□□□□□ -0.24
Ighv1-9A0A0A6YW37 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv1-9A0A0A6YW37 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Ighv1-9A0A0A6YW37 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv1-9A0A0A6YW37 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv1-9A0A0A6YW37 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv1-9A0A0A6YW37 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv1-9A0A0A6YW37 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv1-9A0A0A6YW37 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Ighv1-9A0A0A6YW37 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv1-9A0A0A6YW37 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Ighv1-9A0A0A6YW37 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Ighv1-9A0A0A6YW37 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ighv1-9A0A0A6YW37 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ighv1-9A0A0A6YW37 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ighv1-9A0A0A6YW37 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ighv1-9A0A0A6YW37 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ighv1-9A0A0A6YW37 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Ighv1-9A0A0A6YW37 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Ighv1-9A0A0A6YW37 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ighv1-9A0A0A6YW37 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ighv1-9A0A0A6YW37 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ighv1-9A0A0A6YW37 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Ighv1-9A0A0A6YW37 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ighv1-9A0A0A6YW37 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ighv1-9A0A0A6YW37 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Ighv1-9A0A0A6YW37 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ighv1-9A0A0A6YW37 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ighv1-9A0A0A6YW37 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ighv1-9A0A0A6YW37 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ighv1-9A0A0A6YW37 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ighv1-9A0A0A6YW37 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ighv1-9A0A0A6YW37 Gm43672-201ENSMUST00000199072 1731 ntBASIC13.51□□□□□ -0.25
Ighv1-9A0A0A6YW37 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ighv1-9A0A0A6YW37 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC13.51□□□□□ -0.25
Ighv1-9A0A0A6YW37 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC13.51□□□□□ -0.25
Ighv1-9A0A0A6YW37 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ighv1-9A0A0A6YW37 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC13.51□□□□□ -0.25
Ighv1-9A0A0A6YW37 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ighv1-9A0A0A6YW37 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ighv1-9A0A0A6YW37 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ighv1-9A0A0A6YW37 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ighv1-9A0A0A6YW37 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ighv1-9A0A0A6YW37 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ighv1-9A0A0A6YW37 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Ighv1-9A0A0A6YW37 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ighv1-9A0A0A6YW37 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ighv1-9A0A0A6YW37 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ighv1-9A0A0A6YW37 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC13.5□□□□□ -0.25
Ighv1-9A0A0A6YW37 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ighv1-9A0A0A6YW37 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC13.5□□□□□ -0.25
Ighv1-9A0A0A6YW37 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC13.5□□□□□ -0.25
Ighv1-9A0A0A6YW37 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ighv1-9A0A0A6YW37 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ighv1-9A0A0A6YW37 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ighv1-9A0A0A6YW37 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ighv1-9A0A0A6YW37 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ighv1-9A0A0A6YW37 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ighv1-9A0A0A6YW37 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ighv1-9A0A0A6YW37 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC13.5□□□□□ -0.25
Ighv1-9A0A0A6YW37 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Ighv1-9A0A0A6YW37 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ighv1-9A0A0A6YW37 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ighv1-9A0A0A6YW37 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ighv1-9A0A0A6YW37 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ighv1-9A0A0A6YW37 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ighv1-9A0A0A6YW37 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Ighv1-9A0A0A6YW37 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC13.49□□□□□ -0.25
Ighv1-9A0A0A6YW37 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ighv1-9A0A0A6YW37 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
Ighv1-9A0A0A6YW37 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ighv1-9A0A0A6YW37 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Ighv1-9A0A0A6YW37 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ighv1-9A0A0A6YW37 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ighv1-9A0A0A6YW37 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ighv1-9A0A0A6YW37 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ighv1-9A0A0A6YW37 Gm37811-201ENSMUST00000192416 2601 ntBASIC13.49□□□□□ -0.25
Ighv1-9A0A0A6YW37 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ighv1-9A0A0A6YW37 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ighv1-9A0A0A6YW37 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Ighv1-9A0A0A6YW37 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Ighv1-9A0A0A6YW37 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
Ighv1-9A0A0A6YW37 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Ighv1-9A0A0A6YW37 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ighv1-9A0A0A6YW37 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ighv1-9A0A0A6YW37 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ighv1-9A0A0A6YW37 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Ighv1-9A0A0A6YW37 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Ighv1-9A0A0A6YW37 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Ighv1-9A0A0A6YW37 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms