Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav18A0A075B656 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav18A0A075B656 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav18A0A075B656 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav18A0A075B656 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav18A0A075B656 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav18A0A075B656 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Trav18A0A075B656 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav18A0A075B656 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav18A0A075B656 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav18A0A075B656 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav18A0A075B656 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav18A0A075B656 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav18A0A075B656 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav18A0A075B656 Gm37374-201ENSMUST00000194954 1829 ntBASIC14.7□□□□□ -0.06
Trav18A0A075B656 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav18A0A075B656 Shroom3-211ENSMUST00000225438 5742 ntBASIC14.7□□□□□ -0.06
Trav18A0A075B656 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Trav18A0A075B656 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav18A0A075B656 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Trav18A0A075B656 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC14.7□□□□□ -0.06
Trav18A0A075B656 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav18A0A075B656 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav18A0A075B656 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav18A0A075B656 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Trav18A0A075B656 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav18A0A075B656 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Trav18A0A075B656 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav18A0A075B656 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav18A0A075B656 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Trav18A0A075B656 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC14.69□□□□□ -0.06
Trav18A0A075B656 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC14.69□□□□□ -0.06
Trav18A0A075B656 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC14.69□□□□□ -0.06
Trav18A0A075B656 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav18A0A075B656 Gm37194-201ENSMUST00000193092 3031 ntBASIC14.69□□□□□ -0.06
Trav18A0A075B656 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav18A0A075B656 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav18A0A075B656 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav18A0A075B656 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav18A0A075B656 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav18A0A075B656 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav18A0A075B656 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav18A0A075B656 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav18A0A075B656 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav18A0A075B656 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav18A0A075B656 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav18A0A075B656 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav18A0A075B656 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
Trav18A0A075B656 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav18A0A075B656 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav18A0A075B656 Gm22325-201ENSMUST00000158904 308 ntBASIC14.68□□□□□ -0.06
Trav18A0A075B656 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC14.68□□□□□ -0.06
Trav18A0A075B656 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav18A0A075B656 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav18A0A075B656 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav18A0A075B656 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav18A0A075B656 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC14.67□□□□□ -0.06
Trav18A0A075B656 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav18A0A075B656 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
Trav18A0A075B656 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav18A0A075B656 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Trav18A0A075B656 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav18A0A075B656 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC14.67□□□□□ -0.06
Trav18A0A075B656 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav18A0A075B656 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav18A0A075B656 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav18A0A075B656 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav18A0A075B656 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav18A0A075B656 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav18A0A075B656 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav18A0A075B656 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav18A0A075B656 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav18A0A075B656 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav18A0A075B656 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav18A0A075B656 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav18A0A075B656 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav18A0A075B656 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav18A0A075B656 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC14.66□□□□□ -0.06
Trav18A0A075B656 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC14.66□□□□□ -0.06
Trav18A0A075B656 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav18A0A075B656 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav18A0A075B656 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC14.66□□□□□ -0.06
Trav18A0A075B656 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC14.66□□□□□ -0.06
Trav18A0A075B656 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav18A0A075B656 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
Trav18A0A075B656 Gm7514-201ENSMUST00000209475 934 ntBASIC14.66□□□□□ -0.06
Trav18A0A075B656 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav18A0A075B656 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC14.66□□□□□ -0.06
Trav18A0A075B656 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC14.66□□□□□ -0.06
Trav18A0A075B656 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav18A0A075B656 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav18A0A075B656 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav18A0A075B656 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav18A0A075B656 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC14.66□□□□□ -0.06
Trav18A0A075B656 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav18A0A075B656 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav18A0A075B656 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav18A0A075B656 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav18A0A075B656 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav18A0A075B656 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms