Protein–RNA interactions for Protein: A0A075B651

Trav4-4-dv10, T cell receptor alpha variable 4-4-DV10 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-4-dv10A0A075B651 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Trav4-4-dv10A0A075B651 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav4-4-dv10A0A075B651 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC14.01□□□□□ -0.17
Trav4-4-dv10A0A075B651 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trav4-4-dv10A0A075B651 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC14.01□□□□□ -0.17
Trav4-4-dv10A0A075B651 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Trav4-4-dv10A0A075B651 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Trav4-4-dv10A0A075B651 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Trav4-4-dv10A0A075B651 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC14.01□□□□□ -0.17
Trav4-4-dv10A0A075B651 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav4-4-dv10A0A075B651 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav4-4-dv10A0A075B651 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav4-4-dv10A0A075B651 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav4-4-dv10A0A075B651 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav4-4-dv10A0A075B651 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav4-4-dv10A0A075B651 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav4-4-dv10A0A075B651 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav4-4-dv10A0A075B651 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav4-4-dv10A0A075B651 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav4-4-dv10A0A075B651 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav4-4-dv10A0A075B651 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav4-4-dv10A0A075B651 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav4-4-dv10A0A075B651 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav4-4-dv10A0A075B651 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav4-4-dv10A0A075B651 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC14□□□□□ -0.17
Trav4-4-dv10A0A075B651 Gm43017-201ENSMUST00000198296 752 ntBASIC14□□□□□ -0.17
Trav4-4-dv10A0A075B651 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav4-4-dv10A0A075B651 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav4-4-dv10A0A075B651 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav4-4-dv10A0A075B651 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC14□□□□□ -0.17
Trav4-4-dv10A0A075B651 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trav4-4-dv10A0A075B651 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav4-4-dv10A0A075B651 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav4-4-dv10A0A075B651 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav4-4-dv10A0A075B651 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Trav4-4-dv10A0A075B651 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav4-4-dv10A0A075B651 Gm43808-201ENSMUST00000202534 2065 ntBASIC14□□□□□ -0.17
Trav4-4-dv10A0A075B651 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav4-4-dv10A0A075B651 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav4-4-dv10A0A075B651 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav4-4-dv10A0A075B651 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Trav4-4-dv10A0A075B651 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav4-4-dv10A0A075B651 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav4-4-dv10A0A075B651 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav4-4-dv10A0A075B651 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav4-4-dv10A0A075B651 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav4-4-dv10A0A075B651 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Trav4-4-dv10A0A075B651 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav4-4-dv10A0A075B651 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC13.99□□□□□ -0.17
Trav4-4-dv10A0A075B651 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav4-4-dv10A0A075B651 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Trav4-4-dv10A0A075B651 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC13.99□□□□□ -0.17
Trav4-4-dv10A0A075B651 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav4-4-dv10A0A075B651 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav4-4-dv10A0A075B651 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav4-4-dv10A0A075B651 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav4-4-dv10A0A075B651 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trav4-4-dv10A0A075B651 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC13.99□□□□□ -0.17
Trav4-4-dv10A0A075B651 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Trav4-4-dv10A0A075B651 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav4-4-dv10A0A075B651 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav4-4-dv10A0A075B651 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav4-4-dv10A0A075B651 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav4-4-dv10A0A075B651 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Trav4-4-dv10A0A075B651 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav4-4-dv10A0A075B651 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav4-4-dv10A0A075B651 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav4-4-dv10A0A075B651 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav4-4-dv10A0A075B651 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav4-4-dv10A0A075B651 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav4-4-dv10A0A075B651 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC13.98□□□□□ -0.17
Trav4-4-dv10A0A075B651 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav4-4-dv10A0A075B651 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav4-4-dv10A0A075B651 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav4-4-dv10A0A075B651 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Trav4-4-dv10A0A075B651 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav4-4-dv10A0A075B651 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav4-4-dv10A0A075B651 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav4-4-dv10A0A075B651 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
Trav4-4-dv10A0A075B651 Gm15635-204ENSMUST00000208024 2539 ntBASIC13.98□□□□□ -0.17
Trav4-4-dv10A0A075B651 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav4-4-dv10A0A075B651 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav4-4-dv10A0A075B651 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav4-4-dv10A0A075B651 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav4-4-dv10A0A075B651 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav4-4-dv10A0A075B651 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav4-4-dv10A0A075B651 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav4-4-dv10A0A075B651 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav4-4-dv10A0A075B651 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav4-4-dv10A0A075B651 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav4-4-dv10A0A075B651 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
Trav4-4-dv10A0A075B651 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav4-4-dv10A0A075B651 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Trav4-4-dv10A0A075B651 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav4-4-dv10A0A075B651 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav4-4-dv10A0A075B651 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav4-4-dv10A0A075B651 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav4-4-dv10A0A075B651 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC13.96□□□□□ -0.17
Trav4-4-dv10A0A075B651 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav4-4-dv10A0A075B651 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms