Protein–RNA interactions for Protein: A0A075B639

Trav6-7-dv9, T cell receptor alpha variable 6-7-DV9 (Fragment), mousemouse

Predictions only

Length 125 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-7-dv9A0A075B639 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6-7-dv9A0A075B639 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6-7-dv9A0A075B639 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC15.92■□□□□ 0.14
Trav6-7-dv9A0A075B639 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6-7-dv9A0A075B639 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6-7-dv9A0A075B639 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC15.92■□□□□ 0.14
Trav6-7-dv9A0A075B639 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6-7-dv9A0A075B639 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6-7-dv9A0A075B639 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6-7-dv9A0A075B639 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Trav6-7-dv9A0A075B639 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
Trav6-7-dv9A0A075B639 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6-7-dv9A0A075B639 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC15.92■□□□□ 0.14
Trav6-7-dv9A0A075B639 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Trav6-7-dv9A0A075B639 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Trav6-7-dv9A0A075B639 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6-7-dv9A0A075B639 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6-7-dv9A0A075B639 Gm37563-201ENSMUST00000192580 1513 ntBASIC15.92■□□□□ 0.14
Trav6-7-dv9A0A075B639 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6-7-dv9A0A075B639 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6-7-dv9A0A075B639 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6-7-dv9A0A075B639 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6-7-dv9A0A075B639 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6-7-dv9A0A075B639 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trav6-7-dv9A0A075B639 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6-7-dv9A0A075B639 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6-7-dv9A0A075B639 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6-7-dv9A0A075B639 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC15.91■□□□□ 0.14
Trav6-7-dv9A0A075B639 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC15.91■□□□□ 0.14
Trav6-7-dv9A0A075B639 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6-7-dv9A0A075B639 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6-7-dv9A0A075B639 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6-7-dv9A0A075B639 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6-7-dv9A0A075B639 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC15.91■□□□□ 0.14
Trav6-7-dv9A0A075B639 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC15.91■□□□□ 0.14
Trav6-7-dv9A0A075B639 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6-7-dv9A0A075B639 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6-7-dv9A0A075B639 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6-7-dv9A0A075B639 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Trav6-7-dv9A0A075B639 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6-7-dv9A0A075B639 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6-7-dv9A0A075B639 Gm37374-201ENSMUST00000194954 1829 ntBASIC15.91■□□□□ 0.14
Trav6-7-dv9A0A075B639 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6-7-dv9A0A075B639 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6-7-dv9A0A075B639 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6-7-dv9A0A075B639 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6-7-dv9A0A075B639 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav6-7-dv9A0A075B639 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Trav6-7-dv9A0A075B639 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Trav6-7-dv9A0A075B639 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav6-7-dv9A0A075B639 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav6-7-dv9A0A075B639 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC15.9■□□□□ 0.14
Trav6-7-dv9A0A075B639 AC140264.2-202ENSMUST00000218746 817 ntBASIC15.9■□□□□ 0.14
Trav6-7-dv9A0A075B639 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav6-7-dv9A0A075B639 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav6-7-dv9A0A075B639 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Trav6-7-dv9A0A075B639 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6-7-dv9A0A075B639 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6-7-dv9A0A075B639 Rarb-207ENSMUST00000225921 2756 ntBASIC15.89■□□□□ 0.13
Trav6-7-dv9A0A075B639 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC15.89■□□□□ 0.13
Trav6-7-dv9A0A075B639 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6-7-dv9A0A075B639 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC15.89■□□□□ 0.13
Trav6-7-dv9A0A075B639 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Trav6-7-dv9A0A075B639 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC15.89■□□□□ 0.13
Trav6-7-dv9A0A075B639 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6-7-dv9A0A075B639 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC15.89■□□□□ 0.13
Trav6-7-dv9A0A075B639 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav6-7-dv9A0A075B639 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav6-7-dv9A0A075B639 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav6-7-dv9A0A075B639 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav6-7-dv9A0A075B639 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav6-7-dv9A0A075B639 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav6-7-dv9A0A075B639 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Trav6-7-dv9A0A075B639 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav6-7-dv9A0A075B639 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav6-7-dv9A0A075B639 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav6-7-dv9A0A075B639 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav6-7-dv9A0A075B639 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav6-7-dv9A0A075B639 Gm27405-201ENSMUST00000184201 112 ntBASIC15.88■□□□□ 0.13
Trav6-7-dv9A0A075B639 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC15.88■□□□□ 0.13
Trav6-7-dv9A0A075B639 Gm7291-201ENSMUST00000199147 382 ntBASIC15.88■□□□□ 0.13
Trav6-7-dv9A0A075B639 Gm44544-201ENSMUST00000207052 1844 ntBASIC15.88■□□□□ 0.13
Trav6-7-dv9A0A075B639 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav6-7-dv9A0A075B639 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav6-7-dv9A0A075B639 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav6-7-dv9A0A075B639 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav6-7-dv9A0A075B639 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav6-7-dv9A0A075B639 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav6-7-dv9A0A075B639 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav6-7-dv9A0A075B639 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav6-7-dv9A0A075B639 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav6-7-dv9A0A075B639 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav6-7-dv9A0A075B639 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Trav6-7-dv9A0A075B639 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav6-7-dv9A0A075B639 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Trav6-7-dv9A0A075B639 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav6-7-dv9A0A075B639 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC15.87■□□□□ 0.13
Trav6-7-dv9A0A075B639 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav6-7-dv9A0A075B639 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC15.87■□□□□ 0.13
Trav6-7-dv9A0A075B639 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms