Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC14.24□□□□□ -0.13
Trav4-2A0A075B638 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav4-2A0A075B638 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Trav4-2A0A075B638 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav4-2A0A075B638 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav4-2A0A075B638 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav4-2A0A075B638 Gm37519-201ENSMUST00000191687 2210 ntBASIC14.24□□□□□ -0.13
Trav4-2A0A075B638 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav4-2A0A075B638 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav4-2A0A075B638 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC14.24□□□□□ -0.13
Trav4-2A0A075B638 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav4-2A0A075B638 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav4-2A0A075B638 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav4-2A0A075B638 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav4-2A0A075B638 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav4-2A0A075B638 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav4-2A0A075B638 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Trav4-2A0A075B638 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav4-2A0A075B638 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav4-2A0A075B638 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC14.23□□□□□ -0.13
Trav4-2A0A075B638 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav4-2A0A075B638 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Trav4-2A0A075B638 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC14.23□□□□□ -0.13
Trav4-2A0A075B638 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC14.23□□□□□ -0.13
Trav4-2A0A075B638 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav4-2A0A075B638 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav4-2A0A075B638 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav4-2A0A075B638 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav4-2A0A075B638 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav4-2A0A075B638 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
Trav4-2A0A075B638 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav4-2A0A075B638 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav4-2A0A075B638 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav4-2A0A075B638 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC14.22□□□□□ -0.13
Trav4-2A0A075B638 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav4-2A0A075B638 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav4-2A0A075B638 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trav4-2A0A075B638 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav4-2A0A075B638 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav4-2A0A075B638 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav4-2A0A075B638 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC14.22□□□□□ -0.13
Trav4-2A0A075B638 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav4-2A0A075B638 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav4-2A0A075B638 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC14.22□□□□□ -0.13
Trav4-2A0A075B638 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav4-2A0A075B638 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav4-2A0A075B638 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav4-2A0A075B638 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC14.22□□□□□ -0.13
Trav4-2A0A075B638 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav4-2A0A075B638 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav4-2A0A075B638 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav4-2A0A075B638 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Trav4-2A0A075B638 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trav4-2A0A075B638 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav4-2A0A075B638 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav4-2A0A075B638 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav4-2A0A075B638 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav4-2A0A075B638 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav4-2A0A075B638 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav4-2A0A075B638 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav4-2A0A075B638 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav4-2A0A075B638 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav4-2A0A075B638 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC14.21□□□□□ -0.13
Trav4-2A0A075B638 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav4-2A0A075B638 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav4-2A0A075B638 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav4-2A0A075B638 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Trav4-2A0A075B638 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav4-2A0A075B638 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav4-2A0A075B638 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav4-2A0A075B638 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav4-2A0A075B638 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC14.21□□□□□ -0.13
Trav4-2A0A075B638 Gm15546-201ENSMUST00000122095 826 ntBASIC14.21□□□□□ -0.13
Trav4-2A0A075B638 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC14.21□□□□□ -0.13
Trav4-2A0A075B638 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC14.21□□□□□ -0.13
Trav4-2A0A075B638 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trav4-2A0A075B638 Smad6-203ENSMUST00000179458 273 ntBASIC14.21□□□□□ -0.13
Trav4-2A0A075B638 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC14.21□□□□□ -0.13
Trav4-2A0A075B638 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Trav4-2A0A075B638 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Trav4-2A0A075B638 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav4-2A0A075B638 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav4-2A0A075B638 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trav4-2A0A075B638 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav4-2A0A075B638 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trav4-2A0A075B638 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav4-2A0A075B638 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav4-2A0A075B638 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav4-2A0A075B638 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav4-2A0A075B638 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav4-2A0A075B638 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav4-2A0A075B638 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav4-2A0A075B638 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav4-2A0A075B638 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav4-2A0A075B638 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav4-2A0A075B638 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Trav4-2A0A075B638 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trav4-2A0A075B638 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Trav4-2A0A075B638 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trav4-2A0A075B638 Gm38345-201ENSMUST00000192635 1748 ntBASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms