Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav16d-dv11A0A075B617 Gm43294-201ENSMUST00000202850 2490 ntBASIC13.21□□□□□ -0.29
Trav16d-dv11A0A075B617 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav16d-dv11A0A075B617 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav16d-dv11A0A075B617 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav16d-dv11A0A075B617 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav16d-dv11A0A075B617 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav16d-dv11A0A075B617 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav16d-dv11A0A075B617 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav16d-dv11A0A075B617 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC13.21□□□□□ -0.29
Trav16d-dv11A0A075B617 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC13.21□□□□□ -0.29
Trav16d-dv11A0A075B617 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
Trav16d-dv11A0A075B617 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav16d-dv11A0A075B617 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav16d-dv11A0A075B617 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav16d-dv11A0A075B617 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC13.21□□□□□ -0.3
Trav16d-dv11A0A075B617 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trav16d-dv11A0A075B617 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Trav16d-dv11A0A075B617 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trav16d-dv11A0A075B617 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC13.21□□□□□ -0.3
Trav16d-dv11A0A075B617 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Trav16d-dv11A0A075B617 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav16d-dv11A0A075B617 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav16d-dv11A0A075B617 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav16d-dv11A0A075B617 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav16d-dv11A0A075B617 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trav16d-dv11A0A075B617 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav16d-dv11A0A075B617 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav16d-dv11A0A075B617 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav16d-dv11A0A075B617 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav16d-dv11A0A075B617 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav16d-dv11A0A075B617 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav16d-dv11A0A075B617 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav16d-dv11A0A075B617 Cxcl14-202ENSMUST00000224801 1467 ntBASIC13.2□□□□□ -0.3
Trav16d-dv11A0A075B617 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav16d-dv11A0A075B617 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC13.2□□□□□ -0.3
Trav16d-dv11A0A075B617 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav16d-dv11A0A075B617 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav16d-dv11A0A075B617 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav16d-dv11A0A075B617 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC13.2□□□□□ -0.3
Trav16d-dv11A0A075B617 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Trav16d-dv11A0A075B617 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav16d-dv11A0A075B617 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav16d-dv11A0A075B617 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav16d-dv11A0A075B617 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav16d-dv11A0A075B617 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Trav16d-dv11A0A075B617 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav16d-dv11A0A075B617 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav16d-dv11A0A075B617 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav16d-dv11A0A075B617 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav16d-dv11A0A075B617 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav16d-dv11A0A075B617 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC13.19□□□□□ -0.3
Trav16d-dv11A0A075B617 Gm7860-201ENSMUST00000121190 879 ntBASIC13.19□□□□□ -0.3
Trav16d-dv11A0A075B617 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC13.19□□□□□ -0.3
Trav16d-dv11A0A075B617 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav16d-dv11A0A075B617 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC13.19□□□□□ -0.3
Trav16d-dv11A0A075B617 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav16d-dv11A0A075B617 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav16d-dv11A0A075B617 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav16d-dv11A0A075B617 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav16d-dv11A0A075B617 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav16d-dv11A0A075B617 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav16d-dv11A0A075B617 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav16d-dv11A0A075B617 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trav16d-dv11A0A075B617 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trav16d-dv11A0A075B617 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trav16d-dv11A0A075B617 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav16d-dv11A0A075B617 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Trav16d-dv11A0A075B617 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav16d-dv11A0A075B617 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC13.18□□□□□ -0.3
Trav16d-dv11A0A075B617 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav16d-dv11A0A075B617 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav16d-dv11A0A075B617 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav16d-dv11A0A075B617 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Trav16d-dv11A0A075B617 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav16d-dv11A0A075B617 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Trav16d-dv11A0A075B617 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC13.18□□□□□ -0.3
Trav16d-dv11A0A075B617 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC13.18□□□□□ -0.3
Trav16d-dv11A0A075B617 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav16d-dv11A0A075B617 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav16d-dv11A0A075B617 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav16d-dv11A0A075B617 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav16d-dv11A0A075B617 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav16d-dv11A0A075B617 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav16d-dv11A0A075B617 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav16d-dv11A0A075B617 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trav16d-dv11A0A075B617 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav16d-dv11A0A075B617 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav16d-dv11A0A075B617 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav16d-dv11A0A075B617 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav16d-dv11A0A075B617 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav16d-dv11A0A075B617 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav16d-dv11A0A075B617 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav16d-dv11A0A075B617 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav16d-dv11A0A075B617 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Trav16d-dv11A0A075B617 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC13.17□□□□□ -0.3
Trav16d-dv11A0A075B617 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav16d-dv11A0A075B617 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav16d-dv11A0A075B617 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav16d-dv11A0A075B617 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms