Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC13.16□□□□□ -0.3
Trav13d-1A0A075B606 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trav13d-1A0A075B606 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13d-1A0A075B606 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13d-1A0A075B606 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13d-1A0A075B606 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav13d-1A0A075B606 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13d-1A0A075B606 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13d-1A0A075B606 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13d-1A0A075B606 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13d-1A0A075B606 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC13.15□□□□□ -0.3
Trav13d-1A0A075B606 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC13.15□□□□□ -0.3
Trav13d-1A0A075B606 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13d-1A0A075B606 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Trav13d-1A0A075B606 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13d-1A0A075B606 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
Trav13d-1A0A075B606 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13d-1A0A075B606 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13d-1A0A075B606 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav13d-1A0A075B606 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC13.15□□□□□ -0.31
Trav13d-1A0A075B606 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13d-1A0A075B606 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13d-1A0A075B606 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13d-1A0A075B606 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13d-1A0A075B606 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13d-1A0A075B606 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13d-1A0A075B606 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13d-1A0A075B606 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Trav13d-1A0A075B606 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13d-1A0A075B606 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC13.14□□□□□ -0.31
Trav13d-1A0A075B606 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13d-1A0A075B606 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC13.14□□□□□ -0.31
Trav13d-1A0A075B606 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13d-1A0A075B606 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13d-1A0A075B606 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Trav13d-1A0A075B606 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13d-1A0A075B606 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13d-1A0A075B606 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13d-1A0A075B606 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13d-1A0A075B606 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13d-1A0A075B606 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13d-1A0A075B606 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trav13d-1A0A075B606 Dmtn-210ENSMUST00000228824 2377 ntBASIC13.14□□□□□ -0.31
Trav13d-1A0A075B606 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13d-1A0A075B606 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13d-1A0A075B606 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav13d-1A0A075B606 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13d-1A0A075B606 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13d-1A0A075B606 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13d-1A0A075B606 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13d-1A0A075B606 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13d-1A0A075B606 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13d-1A0A075B606 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13d-1A0A075B606 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13d-1A0A075B606 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13d-1A0A075B606 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13d-1A0A075B606 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13d-1A0A075B606 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Trav13d-1A0A075B606 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Trav13d-1A0A075B606 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13d-1A0A075B606 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13d-1A0A075B606 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC13.13□□□□□ -0.31
Trav13d-1A0A075B606 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13d-1A0A075B606 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13d-1A0A075B606 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav13d-1A0A075B606 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Trav13d-1A0A075B606 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trav13d-1A0A075B606 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13d-1A0A075B606 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13d-1A0A075B606 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13d-1A0A075B606 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13d-1A0A075B606 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13d-1A0A075B606 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13d-1A0A075B606 Gm45606-201ENSMUST00000209836 2795 ntBASIC13.12□□□□□ -0.31
Trav13d-1A0A075B606 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
Trav13d-1A0A075B606 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13d-1A0A075B606 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC13.12□□□□□ -0.31
Trav13d-1A0A075B606 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13d-1A0A075B606 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC13.12□□□□□ -0.31
Trav13d-1A0A075B606 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC13.12□□□□□ -0.31
Trav13d-1A0A075B606 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
Trav13d-1A0A075B606 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13d-1A0A075B606 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13d-1A0A075B606 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13d-1A0A075B606 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13d-1A0A075B606 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13d-1A0A075B606 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13d-1A0A075B606 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13d-1A0A075B606 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav13d-1A0A075B606 Gm42939-201ENSMUST00000197514 2205 ntBASIC13.12□□□□□ -0.31
Trav13d-1A0A075B606 Gm21596-201ENSMUST00000178049 1316 ntBASIC13.12□□□□□ -0.31
Trav13d-1A0A075B606 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13d-1A0A075B606 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13d-1A0A075B606 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13d-1A0A075B606 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13d-1A0A075B606 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13d-1A0A075B606 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13d-1A0A075B606 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13d-1A0A075B606 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav13d-1A0A075B606 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms