Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-6A0A075B603 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-6A0A075B603 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-6A0A075B603 Haglr-201ENSMUST00000100000 2085 ntBASIC13.38□□□□□ -0.27
Trav6-6A0A075B603 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-6A0A075B603 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Trav6-6A0A075B603 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-6A0A075B603 Gm27454-201ENSMUST00000185090 204 ntBASIC13.38□□□□□ -0.27
Trav6-6A0A075B603 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-6A0A075B603 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-6A0A075B603 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Trav6-6A0A075B603 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-6A0A075B603 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-6A0A075B603 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-6A0A075B603 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-6A0A075B603 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Trav6-6A0A075B603 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav6-6A0A075B603 CT010478.1-201ENSMUST00000220747 2787 ntBASIC13.37□□□□□ -0.27
Trav6-6A0A075B603 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-6A0A075B603 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Trav6-6A0A075B603 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-6A0A075B603 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-6A0A075B603 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-6A0A075B603 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-6A0A075B603 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-6A0A075B603 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC13.37□□□□□ -0.27
Trav6-6A0A075B603 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-6A0A075B603 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-6A0A075B603 Gm26833-201ENSMUST00000180899 440 ntBASIC13.37□□□□□ -0.27
Trav6-6A0A075B603 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC13.37□□□□□ -0.27
Trav6-6A0A075B603 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC13.37□□□□□ -0.27
Trav6-6A0A075B603 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-6A0A075B603 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trav6-6A0A075B603 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-6A0A075B603 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-6A0A075B603 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Trav6-6A0A075B603 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-6A0A075B603 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-6A0A075B603 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-6A0A075B603 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trav6-6A0A075B603 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-6A0A075B603 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trav6-6A0A075B603 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6-6A0A075B603 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6-6A0A075B603 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6-6A0A075B603 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6-6A0A075B603 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6-6A0A075B603 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC13.36□□□□□ -0.27
Trav6-6A0A075B603 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6-6A0A075B603 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6-6A0A075B603 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC13.36□□□□□ -0.27
Trav6-6A0A075B603 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6-6A0A075B603 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6-6A0A075B603 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6-6A0A075B603 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6-6A0A075B603 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6-6A0A075B603 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6-6A0A075B603 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6-6A0A075B603 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6-6A0A075B603 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6-6A0A075B603 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6-6A0A075B603 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6-6A0A075B603 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6-6A0A075B603 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6-6A0A075B603 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6-6A0A075B603 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trav6-6A0A075B603 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Trav6-6A0A075B603 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC13.36□□□□□ -0.27
Trav6-6A0A075B603 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-6A0A075B603 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-6A0A075B603 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-6A0A075B603 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-6A0A075B603 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-6A0A075B603 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-6A0A075B603 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC13.35□□□□□ -0.27
Trav6-6A0A075B603 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-6A0A075B603 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-6A0A075B603 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-6A0A075B603 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-6A0A075B603 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-6A0A075B603 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC13.35□□□□□ -0.27
Trav6-6A0A075B603 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-6A0A075B603 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-6A0A075B603 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-6A0A075B603 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-6A0A075B603 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC13.35□□□□□ -0.27
Trav6-6A0A075B603 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-6A0A075B603 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-6A0A075B603 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-6A0A075B603 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-6A0A075B603 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trav6-6A0A075B603 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Trav6-6A0A075B603 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC13.34□□□□□ -0.27
Trav6-6A0A075B603 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6-6A0A075B603 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6-6A0A075B603 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6-6A0A075B603 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6-6A0A075B603 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6-6A0A075B603 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav6-6A0A075B603 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms