Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.99■□□□□ 0.47
Trbv4A0A075B5I2 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trbv4A0A075B5I2 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trbv4A0A075B5I2 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trbv4A0A075B5I2 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Trbv4A0A075B5I2 AC122769.4-201ENSMUST00000228166 901 ntBASIC17.99■□□□□ 0.47
Trbv4A0A075B5I2 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trbv4A0A075B5I2 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trbv4A0A075B5I2 Zcchc6-207ENSMUST00000225576 2499 ntBASIC17.99■□□□□ 0.47
Trbv4A0A075B5I2 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trbv4A0A075B5I2 Idnk-204ENSMUST00000226010 1898 ntBASIC17.99■□□□□ 0.47
Trbv4A0A075B5I2 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trbv4A0A075B5I2 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trbv4A0A075B5I2 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.98■□□□□ 0.47
Trbv4A0A075B5I2 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Trbv4A0A075B5I2 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trbv4A0A075B5I2 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.98■□□□□ 0.47
Trbv4A0A075B5I2 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trbv4A0A075B5I2 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trbv4A0A075B5I2 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.98■□□□□ 0.47
Trbv4A0A075B5I2 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC17.98■□□□□ 0.47
Trbv4A0A075B5I2 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trbv4A0A075B5I2 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.98■□□□□ 0.47
Trbv4A0A075B5I2 Flg-201ENSMUST00000050758 1488 ntBASIC17.98■□□□□ 0.47
Trbv4A0A075B5I2 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trbv4A0A075B5I2 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.98■□□□□ 0.47
Trbv4A0A075B5I2 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.98■□□□□ 0.47
Trbv4A0A075B5I2 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trbv4A0A075B5I2 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Trbv4A0A075B5I2 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trbv4A0A075B5I2 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.98■□□□□ 0.47
Trbv4A0A075B5I2 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trbv4A0A075B5I2 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trbv4A0A075B5I2 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Trbv4A0A075B5I2 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Trbv4A0A075B5I2 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trbv4A0A075B5I2 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trbv4A0A075B5I2 Gm5408-201ENSMUST00000197998 747 ntBASIC17.97■□□□□ 0.47
Trbv4A0A075B5I2 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trbv4A0A075B5I2 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trbv4A0A075B5I2 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trbv4A0A075B5I2 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trbv4A0A075B5I2 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC17.97■□□□□ 0.47
Trbv4A0A075B5I2 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trbv4A0A075B5I2 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trbv4A0A075B5I2 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trbv4A0A075B5I2 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trbv4A0A075B5I2 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trbv4A0A075B5I2 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.96■□□□□ 0.47
Trbv4A0A075B5I2 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trbv4A0A075B5I2 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.96■□□□□ 0.47
Trbv4A0A075B5I2 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trbv4A0A075B5I2 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trbv4A0A075B5I2 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trbv4A0A075B5I2 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Trbv4A0A075B5I2 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trbv4A0A075B5I2 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC17.96■□□□□ 0.47
Trbv4A0A075B5I2 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Trbv4A0A075B5I2 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trbv4A0A075B5I2 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trbv4A0A075B5I2 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trbv4A0A075B5I2 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trbv4A0A075B5I2 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trbv4A0A075B5I2 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trbv4A0A075B5I2 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Trbv4A0A075B5I2 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.95■□□□□ 0.46
Trbv4A0A075B5I2 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Trbv4A0A075B5I2 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trbv4A0A075B5I2 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trbv4A0A075B5I2 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trbv4A0A075B5I2 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trbv4A0A075B5I2 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
Trbv4A0A075B5I2 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Trbv4A0A075B5I2 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.95■□□□□ 0.46
Trbv4A0A075B5I2 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC17.95■□□□□ 0.46
Trbv4A0A075B5I2 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.95■□□□□ 0.46
Trbv4A0A075B5I2 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Trbv4A0A075B5I2 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trbv4A0A075B5I2 Gm8969-201ENSMUST00000199694 526 ntBASIC17.95■□□□□ 0.46
Trbv4A0A075B5I2 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.95■□□□□ 0.46
Trbv4A0A075B5I2 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trbv4A0A075B5I2 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Trbv4A0A075B5I2 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trbv4A0A075B5I2 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Trbv4A0A075B5I2 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trbv4A0A075B5I2 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Trbv4A0A075B5I2 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trbv4A0A075B5I2 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trbv4A0A075B5I2 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trbv4A0A075B5I2 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trbv4A0A075B5I2 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trbv4A0A075B5I2 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trbv4A0A075B5I2 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trbv4A0A075B5I2 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.94■□□□□ 0.46
Trbv4A0A075B5I2 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trbv4A0A075B5I2 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trbv4A0A075B5I2 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trbv4A0A075B5I2 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.94■□□□□ 0.46
Trbv4A0A075B5I2 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Trbv4A0A075B5I2 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 53.6 ms