Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gm21638-201ENSMUST00000179473 836 ntBASIC6.77□□□□□ -1.33
Trim39Q9ESN2 Gm7763-201ENSMUST00000182220 1006 ntBASIC6.77□□□□□ -1.33
Trim39Q9ESN2 Gm4891-201ENSMUST00000182279 912 ntBASIC6.77□□□□□ -1.33
Trim39Q9ESN2 Gm29216-201ENSMUST00000187117 492 ntBASIC6.77□□□□□ -1.33
Trim39Q9ESN2 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Trim39Q9ESN2 Gm20736-203ENSMUST00000190282 836 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Trim39Q9ESN2 D130017N08Rik-204ENSMUST00000199836 506 ntTSL 2 BASIC6.77□□□□□ -1.33
Trim39Q9ESN2 Gm8774-201ENSMUST00000203621 692 ntBASIC6.77□□□□□ -1.33
Trim39Q9ESN2 Gm44140-201ENSMUST00000204157 675 ntTSL 3 BASIC6.77□□□□□ -1.33
Trim39Q9ESN2 Gm7039-201ENSMUST00000205138 346 ntBASIC6.77□□□□□ -1.33
Trim39Q9ESN2 Gm3189-201ENSMUST00000205595 832 ntBASIC6.77□□□□□ -1.33
Trim39Q9ESN2 1500002F19Rik-203ENSMUST00000211184 375 ntTSL 3 BASIC6.77□□□□□ -1.33
Trim39Q9ESN2 Olfr534-ps1-201ENSMUST00000211776 870 ntBASIC6.77□□□□□ -1.33
Trim39Q9ESN2 AC073947.3-201ENSMUST00000215576 766 ntBASIC6.77□□□□□ -1.33
Trim39Q9ESN2 AC131677.1-201ENSMUST00000218721 535 ntBASIC6.77□□□□□ -1.33
Trim39Q9ESN2 AC164424.3-201ENSMUST00000220809 148 ntBASIC6.77□□□□□ -1.33
Trim39Q9ESN2 CT030175.1-201ENSMUST00000220822 408 ntBASIC6.77□□□□□ -1.33
Trim39Q9ESN2 AC124687.5-201ENSMUST00000222734 596 ntTSL 5 BASIC6.77□□□□□ -1.33
Trim39Q9ESN2 AC166358.8-201ENSMUST00000223288 105 ntBASIC6.77□□□□□ -1.33
Trim39Q9ESN2 AC124739.1-201ENSMUST00000223433 148 ntBASIC6.77□□□□□ -1.33
Trim39Q9ESN2 AC164295.1-201ENSMUST00000224861 186 ntBASIC6.77□□□□□ -1.33
Trim39Q9ESN2 AC131029.2-203ENSMUST00000228116 1244 ntBASIC6.77□□□□□ -1.33
Trim39Q9ESN2 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Trim39Q9ESN2 Vmn1r215-201ENSMUST00000072972 1048 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Trim39Q9ESN2 Olfr611-201ENSMUST00000078108 972 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Trim39Q9ESN2 Gm25926-201ENSMUST00000082899 160 ntBASIC6.77□□□□□ -1.33
Trim39Q9ESN2 Gm7493-201ENSMUST00000085919 626 ntBASIC6.77□□□□□ -1.33
Trim39Q9ESN2 Olfr1456-ps1-201ENSMUST00000087769 518 ntBASIC6.77□□□□□ -1.33
Trim39Q9ESN2 Gm8444-201ENSMUST00000092020 357 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Trim39Q9ESN2 Olfr618-201ENSMUST00000098197 957 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Trim39Q9ESN2 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Trim39Q9ESN2 Cd44-207ENSMUST00000111194 5045 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Trim39Q9ESN2 Phxr4-202ENSMUST00000216590 1391 ntBASIC6.77□□□□□ -1.33
Trim39Q9ESN2 Stt3a-201ENSMUST00000120381 5867 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Trim39Q9ESN2 Olfr401-202ENSMUST00000213754 2227 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Trim39Q9ESN2 Dthd1-201ENSMUST00000170704 2427 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Trim39Q9ESN2 Acp2-201ENSMUST00000002172 4656 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Trim39Q9ESN2 Sh2d1b2-202ENSMUST00000162752 2542 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Trim39Q9ESN2 Gm43229-201ENSMUST00000201812 1850 ntBASIC6.77□□□□□ -1.33
Trim39Q9ESN2 A530058O07Rik-201ENSMUST00000222059 3364 ntBASIC6.77□□□□□ -1.33
Trim39Q9ESN2 Dcdc5-202ENSMUST00000122388 4957 ntBASIC6.77□□□□□ -1.33
Trim39Q9ESN2 Ankrd17-205ENSMUST00000197021 8067 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Trim39Q9ESN2 Gm37216-201ENSMUST00000193817 3478 ntBASIC6.77□□□□□ -1.33
Trim39Q9ESN2 Chn1os3-201ENSMUST00000147420 2707 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Trim39Q9ESN2 Gpbp1l1-201ENSMUST00000030460 3588 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Trim39Q9ESN2 Rasgef1b-210ENSMUST00000209346 3028 ntTSL 5 BASIC6.76□□□□□ -1.33
Trim39Q9ESN2 AC121997.2-201ENSMUST00000228095 2294 ntBASIC6.76□□□□□ -1.33
Trim39Q9ESN2 Zscan4d-201ENSMUST00000067210 2272 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Trim39Q9ESN2 Olfr671-203ENSMUST00000217091 3225 ntTSL 5 BASIC6.76□□□□□ -1.33
Trim39Q9ESN2 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Trim39Q9ESN2 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Trim39Q9ESN2 1810018F18Rik-202ENSMUST00000189546 1447 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Trim39Q9ESN2 CT030170.4-203ENSMUST00000221062 1403 ntTSL 5 BASIC6.76□□□□□ -1.33
Trim39Q9ESN2 4933406J09Rik-201ENSMUST00000203352 1505 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Trim39Q9ESN2 Cabyr-207ENSMUST00000191078 1642 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
Trim39Q9ESN2 Gm18957-201ENSMUST00000197623 1813 ntBASIC6.76□□□□□ -1.33
Trim39Q9ESN2 Cenpf-204ENSMUST00000171929 11130 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Trim39Q9ESN2 Arhgap6-203ENSMUST00000112127 3973 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Trim39Q9ESN2 Vwde-201ENSMUST00000054530 3979 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Trim39Q9ESN2 Etl4-202ENSMUST00000066509 7197 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Trim39Q9ESN2 Copa-201ENSMUST00000027833 4351 ntTSL 5 BASIC6.76□□□□□ -1.33
Trim39Q9ESN2 Rnf219-201ENSMUST00000022716 3420 ntAPPRIS P2 TSL 3 BASIC6.76□□□□□ -1.33
Trim39Q9ESN2 Mir804-201ENSMUST00000103251 95 ntBASIC6.76□□□□□ -1.33
Trim39Q9ESN2 Gstm7-203ENSMUST00000106688 783 ntTSL 2 BASIC6.76□□□□□ -1.33
Trim39Q9ESN2 Amelx-202ENSMUST00000112118 799 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Trim39Q9ESN2 Gm8855-201ENSMUST00000118888 878 ntBASIC6.76□□□□□ -1.33
Trim39Q9ESN2 Gm12638-201ENSMUST00000119531 298 ntBASIC6.76□□□□□ -1.33
Trim39Q9ESN2 Gm13711-201ENSMUST00000119708 453 ntBASIC6.76□□□□□ -1.33
Trim39Q9ESN2 Gm15049-201ENSMUST00000120474 463 ntBASIC6.76□□□□□ -1.33
Trim39Q9ESN2 Gm13788-201ENSMUST00000120767 601 ntBASIC6.76□□□□□ -1.33
Trim39Q9ESN2 Gm14229-201ENSMUST00000121178 850 ntBASIC6.76□□□□□ -1.33
Trim39Q9ESN2 Gm11188-201ENSMUST00000122382 388 ntBASIC6.76□□□□□ -1.33
Trim39Q9ESN2 Gm22478-201ENSMUST00000122570 154 ntBASIC6.76□□□□□ -1.33
Trim39Q9ESN2 Gm15591-201ENSMUST00000138539 627 ntTSL 5 BASIC6.76□□□□□ -1.33
Trim39Q9ESN2 Il1rn-205ENSMUST00000142093 321 ntTSL 3 BASIC6.76□□□□□ -1.33
Trim39Q9ESN2 Gm11579-201ENSMUST00000145502 845 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Trim39Q9ESN2 Gm9141-201ENSMUST00000159355 1007 ntBASIC6.76□□□□□ -1.33
Trim39Q9ESN2 Gm9587-201ENSMUST00000172449 454 ntBASIC6.76□□□□□ -1.33
Trim39Q9ESN2 Gm17174-201ENSMUST00000178962 671 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Trim39Q9ESN2 Vmn1r189-201ENSMUST00000186062 1137 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Trim39Q9ESN2 4930568A12Rik-201ENSMUST00000186117 498 ntTSL 3 BASIC6.76□□□□□ -1.33
Trim39Q9ESN2 1700016P04Rik-201ENSMUST00000186770 429 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Trim39Q9ESN2 Gm28869-201ENSMUST00000187199 811 ntTSL 3 BASIC6.76□□□□□ -1.33
Trim39Q9ESN2 Gm28643-201ENSMUST00000188811 356 ntTSL 5 BASIC6.76□□□□□ -1.33
Trim39Q9ESN2 Gm553-201ENSMUST00000189527 701 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Trim39Q9ESN2 Gm28788-201ENSMUST00000189717 375 ntBASIC6.76□□□□□ -1.33
Trim39Q9ESN2 Gm29558-201ENSMUST00000190134 375 ntBASIC6.76□□□□□ -1.33
Trim39Q9ESN2 Gm29000-207ENSMUST00000190152 1160 ntTSL 5 BASIC6.76□□□□□ -1.33
Trim39Q9ESN2 Gm18291-201ENSMUST00000190791 301 ntBASIC6.76□□□□□ -1.33
Trim39Q9ESN2 Gm29605-201ENSMUST00000190800 292 ntBASIC6.76□□□□□ -1.33
Trim39Q9ESN2 Gm7512-201ENSMUST00000195217 1170 ntBASIC6.76□□□□□ -1.33
Trim39Q9ESN2 D13Ertd608e-202ENSMUST00000195797 704 ntAPPRIS P5 TSL 1 (best) BASIC6.76□□□□□ -1.33
Trim39Q9ESN2 Gm19089-201ENSMUST00000197207 613 ntBASIC6.76□□□□□ -1.33
Trim39Q9ESN2 Gm44403-201ENSMUST00000198554 129 ntBASIC6.76□□□□□ -1.33
Trim39Q9ESN2 Gm32585-201ENSMUST00000198586 764 ntTSL 3 BASIC6.76□□□□□ -1.33
Trim39Q9ESN2 Gm18131-201ENSMUST00000199241 449 ntBASIC6.76□□□□□ -1.33
Trim39Q9ESN2 Csn2-209ENSMUST00000199624 890 ntAPPRIS P3 TSL 5 BASIC6.76□□□□□ -1.33
Trim39Q9ESN2 Gm44129-201ENSMUST00000203511 675 ntTSL 3 BASIC6.76□□□□□ -1.33
Trim39Q9ESN2 Gm30694-201ENSMUST00000209278 1230 ntBASIC6.76□□□□□ -1.33
Trim39Q9ESN2 Pvrig-201ENSMUST00000211088 1080 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms