Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gstk1-201ENSMUST00000031897 930 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Cdc40Q9DC48 Gm5229-201ENSMUST00000039375 354 ntBASIC5.51□□□□□ -1.53
Cdc40Q9DC48 Gm44675-201ENSMUST00000208188 2927 ntBASIC5.51□□□□□ -1.53
Cdc40Q9DC48 Mocs2-213ENSMUST00000184245 4559 ntTSL 5 BASIC5.51□□□□□ -1.53
Cdc40Q9DC48 AC158981.2-201ENSMUST00000227565 1537 ntBASIC5.51□□□□□ -1.53
Cdc40Q9DC48 Gm7108-201ENSMUST00000118038 3407 ntBASIC5.51□□□□□ -1.53
Cdc40Q9DC48 Cylc2-201ENSMUST00000041392 1641 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Cdc40Q9DC48 Ankrd55-205ENSMUST00000223871 3209 ntBASIC5.51□□□□□ -1.53
Cdc40Q9DC48 Ifi206-201ENSMUST00000160565 3047 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Cdc40Q9DC48 Mboat2-204ENSMUST00000221952 6792 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Cdc40Q9DC48 Gm18757-201ENSMUST00000207938 3141 ntBASIC5.5□□□□□ -1.53
Cdc40Q9DC48 Tnfaip3-202ENSMUST00000105527 4334 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Cdc40Q9DC48 CT033783.1-201ENSMUST00000220881 2884 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Cdc40Q9DC48 Gm7969-201ENSMUST00000221347 2884 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Cdc40Q9DC48 CT033783.2-201ENSMUST00000222807 2884 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Cdc40Q9DC48 Gm13101-201ENSMUST00000105763 1678 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Cdc40Q9DC48 4930519E07Rik-201ENSMUST00000200907 1665 ntBASIC5.5□□□□□ -1.53
Cdc40Q9DC48 Gm44667-201ENSMUST00000207632 3337 ntBASIC5.5□□□□□ -1.53
Cdc40Q9DC48 Gm3453-201ENSMUST00000170686 1756 ntAPPRIS P5 TSL 5 BASIC5.5□□□□□ -1.53
Cdc40Q9DC48 Rsf1os2-202ENSMUST00000147690 3091 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Cdc40Q9DC48 Scn9a-206ENSMUST00000164384 7530 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
Cdc40Q9DC48 Gm44901-201ENSMUST00000208157 3977 ntBASIC5.5□□□□□ -1.53
Cdc40Q9DC48 Vmn1r71-209ENSMUST00000228526 5137 ntAPPRIS P2 BASIC5.5□□□□□ -1.53
Cdc40Q9DC48 AC160029.1-201ENSMUST00000219628 2678 ntBASIC5.5□□□□□ -1.53
Cdc40Q9DC48 Igkv16-104-201ENSMUST00000103323 378 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Cdc40Q9DC48 Gm4234-201ENSMUST00000119747 714 ntBASIC5.5□□□□□ -1.53
Cdc40Q9DC48 Gm4914-201ENSMUST00000119757 459 ntBASIC5.5□□□□□ -1.53
Cdc40Q9DC48 Gm8430-201ENSMUST00000119780 471 ntBASIC5.5□□□□□ -1.53
Cdc40Q9DC48 Mup-ps16-201ENSMUST00000120085 596 ntBASIC5.5□□□□□ -1.53
Cdc40Q9DC48 Gm8761-201ENSMUST00000121507 955 ntBASIC5.5□□□□□ -1.53
Cdc40Q9DC48 Gm15959-201ENSMUST00000121724 368 ntBASIC5.5□□□□□ -1.53
Cdc40Q9DC48 Gm25782-201ENSMUST00000122526 289 ntBASIC5.5□□□□□ -1.53
Cdc40Q9DC48 Gm11731-201ENSMUST00000139704 670 ntTSL 3 BASIC5.5□□□□□ -1.53
Cdc40Q9DC48 Gm23539-201ENSMUST00000157537 224 ntBASIC5.5□□□□□ -1.53
Cdc40Q9DC48 Gm20401-201ENSMUST00000173717 212 ntBASIC5.5□□□□□ -1.53
Cdc40Q9DC48 Mir6362-201ENSMUST00000184329 107 ntBASIC5.5□□□□□ -1.53
Cdc40Q9DC48 Mir7653-201ENSMUST00000184358 61 ntBASIC5.5□□□□□ -1.53
Cdc40Q9DC48 Gm37517-201ENSMUST00000194004 1289 ntBASIC5.5□□□□□ -1.53
Cdc40Q9DC48 AC157822.1-201ENSMUST00000196643 80 ntBASIC5.5□□□□□ -1.53
Cdc40Q9DC48 n-TStga1-201ENSMUST00000199903 109 ntBASIC5.5□□□□□ -1.53
Cdc40Q9DC48 Gm45026-201ENSMUST00000205292 833 ntBASIC5.5□□□□□ -1.53
Cdc40Q9DC48 Gm45750-201ENSMUST00000211966 354 ntBASIC5.5□□□□□ -1.53
Cdc40Q9DC48 AC160413.1-201ENSMUST00000217909 932 ntTSL 5 BASIC5.5□□□□□ -1.53
Cdc40Q9DC48 AC153357.1-201ENSMUST00000219190 482 ntBASIC5.5□□□□□ -1.53
Cdc40Q9DC48 Gm35890-201ENSMUST00000221195 564 ntTSL 5 BASIC5.5□□□□□ -1.53
Cdc40Q9DC48 Gm19195-201ENSMUST00000222018 511 ntBASIC5.5□□□□□ -1.53
Cdc40Q9DC48 Rps27a-ps2-201ENSMUST00000078766 467 ntBASIC5.5□□□□□ -1.53
Cdc40Q9DC48 Olfr556-201ENSMUST00000098219 1023 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Cdc40Q9DC48 Gm10295-201ENSMUST00000094315 2525 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Cdc40Q9DC48 Odam-202ENSMUST00000129757 1370 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Cdc40Q9DC48 Gm32122-201ENSMUST00000212119 2259 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Cdc40Q9DC48 Ms4a18-201ENSMUST00000177684 1453 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Cdc40Q9DC48 Ryr3-204ENSMUST00000134358 14958 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
Cdc40Q9DC48 Klrk1-205ENSMUST00000168919 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Cdc40Q9DC48 Gm45752-201ENSMUST00000212917 3186 ntTSL 5 BASIC5.5□□□□□ -1.53
Cdc40Q9DC48 Ect2-203ENSMUST00000108300 4086 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Cdc40Q9DC48 2310002F09Rik-202ENSMUST00000181551 2468 ntTSL 5 BASIC5.5□□□□□ -1.53
Cdc40Q9DC48 Lrrtm4-208ENSMUST00000147663 3033 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Cdc40Q9DC48 Gm44113-201ENSMUST00000203510 3041 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Cdc40Q9DC48 Vmn1r8-203ENSMUST00000228690 1699 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Cdc40Q9DC48 Acsl4-204ENSMUST00000112907 5137 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Cdc40Q9DC48 Fkbp15-202ENSMUST00000084528 3329 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Cdc40Q9DC48 Zbtb20-204ENSMUST00000114694 26901 ntAPPRIS P3 TSL 5 BASIC5.49□□□□□ -1.53
Cdc40Q9DC48 Atp7a-201ENSMUST00000055941 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Cdc40Q9DC48 Mug2-201ENSMUST00000081777 4579 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Cdc40Q9DC48 Gm10310-202ENSMUST00000213667 4661 ntAPPRIS P5 TSL 5 BASIC5.49□□□□□ -1.53
Cdc40Q9DC48 D830032E09Rik-202ENSMUST00000189497 1632 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Cdc40Q9DC48 Gm43210-201ENSMUST00000196743 6152 ntBASIC5.49□□□□□ -1.53
Cdc40Q9DC48 Gm10648-201ENSMUST00000207552 2902 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Cdc40Q9DC48 P2ry12-201ENSMUST00000050360 2250 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Cdc40Q9DC48 Olfr55-203ENSMUST00000214891 4428 ntTSL 5 BASIC5.49□□□□□ -1.53
Cdc40Q9DC48 Mbnl1-214ENSMUST00000193517 5151 ntAPPRIS ALT1 TSL 5 BASIC5.49□□□□□ -1.53
Cdc40Q9DC48 Olfr16-202ENSMUST00000215254 2690 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Cdc40Q9DC48 Ccdc110-201ENSMUST00000095326 2656 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Cdc40Q9DC48 Cxcr6-202ENSMUST00000216072 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Cdc40Q9DC48 Olfr344-202ENSMUST00000215879 7675 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Cdc40Q9DC48 Tmigd3-201ENSMUST00000010279 900 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Cdc40Q9DC48 Gm22372-201ENSMUST00000104589 136 ntBASIC5.49□□□□□ -1.53
Cdc40Q9DC48 Mup19-202ENSMUST00000107477 720 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
Cdc40Q9DC48 Pigp-201ENSMUST00000113905 758 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Cdc40Q9DC48 Gm8501-201ENSMUST00000117684 432 ntBASIC5.49□□□□□ -1.53
Cdc40Q9DC48 Gm12308-201ENSMUST00000120440 389 ntBASIC5.49□□□□□ -1.53
Cdc40Q9DC48 Gm13998-201ENSMUST00000120952 335 ntBASIC5.49□□□□□ -1.53
Cdc40Q9DC48 Olfr349-ps1-201ENSMUST00000121879 609 ntBASIC5.49□□□□□ -1.53
Cdc40Q9DC48 Platr28-201ENSMUST00000133824 1294 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Cdc40Q9DC48 Gm15634-201ENSMUST00000147206 492 ntTSL 3 BASIC5.49□□□□□ -1.53
Cdc40Q9DC48 Snora47-201ENSMUST00000157483 138 ntBASIC5.49□□□□□ -1.53
Cdc40Q9DC48 Dab2-209ENSMUST00000161040 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Cdc40Q9DC48 Gm17198-201ENSMUST00000171792 1154 ntBASIC5.49□□□□□ -1.53
Cdc40Q9DC48 Gm26653-201ENSMUST00000181537 1214 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Cdc40Q9DC48 B230110C06Rik-202ENSMUST00000181936 938 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Cdc40Q9DC48 Gm27219-201ENSMUST00000184633 742 ntBASIC5.49□□□□□ -1.53
Cdc40Q9DC48 Gm38343-201ENSMUST00000195786 1060 ntTSL 5 BASIC5.49□□□□□ -1.53
Cdc40Q9DC48 4930563F08Rik-201ENSMUST00000198640 515 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Cdc40Q9DC48 Mir6906-201ENSMUST00000198998 58 ntBASIC5.49□□□□□ -1.53
Cdc40Q9DC48 Trav23-201ENSMUST00000199137 347 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Cdc40Q9DC48 Gm44707-201ENSMUST00000206293 1216 ntTSL 5 BASIC5.49□□□□□ -1.53
Cdc40Q9DC48 2200002A13Rik-201ENSMUST00000206633 709 ntBASIC5.49□□□□□ -1.53
Cdc40Q9DC48 AC122188.1-201ENSMUST00000217534 312 ntBASIC5.49□□□□□ -1.53
Cdc40Q9DC48 Gm46401-201ENSMUST00000221291 1089 ntTSL 5 BASIC5.49□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms