Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Fat1-203ENSMUST00000189017 14651 ntTSL 5 BASIC5.62□□□□□ -1.51
Lsm1Q8VC85 Gm37485-201ENSMUST00000192326 2953 ntBASIC5.62□□□□□ -1.51
Lsm1Q8VC85 BB365896-201ENSMUST00000173978 3000 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Lsm1Q8VC85 Bche-201ENSMUST00000029367 6210 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Lsm1Q8VC85 Magea6-202ENSMUST00000112562 1212 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Lsm1Q8VC85 4930402F06Rik-201ENSMUST00000113009 1150 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Lsm1Q8VC85 Gm11227-201ENSMUST00000119774 471 ntBASIC5.62□□□□□ -1.51
Lsm1Q8VC85 Olfr118-201ENSMUST00000122036 966 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Lsm1Q8VC85 Gm25782-201ENSMUST00000122526 289 ntBASIC5.62□□□□□ -1.51
Lsm1Q8VC85 Gm13299-201ENSMUST00000133644 425 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Lsm1Q8VC85 Gm11364-201ENSMUST00000137593 297 ntTSL 5 BASIC5.62□□□□□ -1.51
Lsm1Q8VC85 Sp3os-203ENSMUST00000137941 628 ntTSL 2 BASIC5.62□□□□□ -1.51
Lsm1Q8VC85 Gm13307-202ENSMUST00000142990 425 ntTSL 5 BASIC5.62□□□□□ -1.51
Lsm1Q8VC85 Klra5-201ENSMUST00000014683 1147 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Lsm1Q8VC85 Gm23207-201ENSMUST00000158665 102 ntBASIC5.62□□□□□ -1.51
Lsm1Q8VC85 Serpina3e-ps-201ENSMUST00000165968 1228 ntBASIC5.62□□□□□ -1.51
Lsm1Q8VC85 Cfhr3-201ENSMUST00000170441 1022 ntBASIC5.62□□□□□ -1.51
Lsm1Q8VC85 Gm5218-201ENSMUST00000172270 465 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Lsm1Q8VC85 Scgb1b21-202ENSMUST00000182901 278 ntTSL 5 BASIC5.62□□□□□ -1.51
Lsm1Q8VC85 Gm29234-201ENSMUST00000187452 1262 ntBASIC5.62□□□□□ -1.51
Lsm1Q8VC85 1700108F19Rik-203ENSMUST00000188798 619 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Lsm1Q8VC85 Gm38030-201ENSMUST00000192376 475 ntBASIC5.62□□□□□ -1.51
Lsm1Q8VC85 Gm37705-201ENSMUST00000195111 577 ntTSL 5 BASIC5.62□□□□□ -1.51
Lsm1Q8VC85 Trav3n-2-201ENSMUST00000197693 334 ntBASIC5.62□□□□□ -1.51
Lsm1Q8VC85 Gm38413-201ENSMUST00000197852 348 ntTSL 2 BASIC5.62□□□□□ -1.51
Lsm1Q8VC85 Gm43391-203ENSMUST00000198110 1001 ntTSL 5 BASIC5.62□□□□□ -1.51
Lsm1Q8VC85 Gm34078-201ENSMUST00000198202 744 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Lsm1Q8VC85 Gm8953-201ENSMUST00000198497 904 ntTSL 5 BASIC5.62□□□□□ -1.51
Lsm1Q8VC85 Trav3d-2-201ENSMUST00000199874 334 ntBASIC5.62□□□□□ -1.51
Lsm1Q8VC85 1700093K21Rik-201ENSMUST00000020527 1030 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Lsm1Q8VC85 Ifitm6-203ENSMUST00000211330 813 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
Lsm1Q8VC85 CT485607.3-201ENSMUST00000213361 672 ntBASIC5.62□□□□□ -1.51
Lsm1Q8VC85 Gm3266-201ENSMUST00000217832 591 ntBASIC5.62□□□□□ -1.51
Lsm1Q8VC85 Gm9088-201ENSMUST00000220237 508 ntBASIC5.62□□□□□ -1.51
Lsm1Q8VC85 AC124510.2-201ENSMUST00000221958 683 ntBASIC5.62□□□□□ -1.51
Lsm1Q8VC85 Magea6-201ENSMUST00000076986 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Lsm1Q8VC85 1700084J12Rik-201ENSMUST00000079057 734 ntBASIC5.62□□□□□ -1.51
Lsm1Q8VC85 Fam183b-202ENSMUST00000094156 567 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Lsm1Q8VC85 AC156031.1-201ENSMUST00000217288 2555 ntBASIC5.62□□□□□ -1.51
Lsm1Q8VC85 Vmn1r86-204ENSMUST00000227700 5487 ntAPPRIS ALT2 BASIC5.62□□□□□ -1.51
Lsm1Q8VC85 Asap1-210ENSMUST00000176384 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Lsm1Q8VC85 Ryr3-202ENSMUST00000091818 15410 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
Lsm1Q8VC85 Ints6l-202ENSMUST00000101553 3201 ntTSL 2 BASIC5.62□□□□□ -1.51
Lsm1Q8VC85 D630030B08Rik-201ENSMUST00000202983 3479 ntBASIC5.62□□□□□ -1.51
Lsm1Q8VC85 Celf2-201ENSMUST00000002176 7718 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
Lsm1Q8VC85 Plxna4os2-201ENSMUST00000152538 2044 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Lsm1Q8VC85 Macf1-204ENSMUST00000106213 18957 ntTSL 5 BASIC5.62□□□□□ -1.51
Lsm1Q8VC85 Olfr1311-203ENSMUST00000215321 2667 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Lsm1Q8VC85 Olfr1252-202ENSMUST00000213196 3331 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Lsm1Q8VC85 Neb-201ENSMUST00000028320 10298 ntTSL 5 BASIC5.61□□□□□ -1.51
Lsm1Q8VC85 Gm21269-201ENSMUST00000206521 12456 ntTSL 3 BASIC5.61□□□□□ -1.51
Lsm1Q8VC85 Mir449c-201ENSMUST00000102192 109 ntBASIC5.61□□□□□ -1.51
Lsm1Q8VC85 Ighv1-19-201ENSMUST00000103505 348 ntAPPRIS ALT2 BASIC5.61□□□□□ -1.51
Lsm1Q8VC85 Gm23294-201ENSMUST00000104150 164 ntBASIC5.61□□□□□ -1.51
Lsm1Q8VC85 Snora35-201ENSMUST00000104579 128 ntBASIC5.61□□□□□ -1.51
Lsm1Q8VC85 Scn1a-203ENSMUST00000112366 8386 ntAPPRIS ALT1 TSL 5 BASIC5.61□□□□□ -1.51
Lsm1Q8VC85 Ica1-202ENSMUST00000115518 1256 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Lsm1Q8VC85 Gm13156-201ENSMUST00000118348 321 ntBASIC5.61□□□□□ -1.51
Lsm1Q8VC85 Mipepos-201ENSMUST00000155855 610 ntTSL 3 BASIC5.61□□□□□ -1.51
Lsm1Q8VC85 Gm15713-201ENSMUST00000155900 1546 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Lsm1Q8VC85 Gm21970-201ENSMUST00000160764 884 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Lsm1Q8VC85 Vmn1r9-201ENSMUST00000171186 1051 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Lsm1Q8VC85 Gm7008-203ENSMUST00000171356 476 ntTSL 2 BASIC5.61□□□□□ -1.51
Lsm1Q8VC85 Pkib-211ENSMUST00000177473 525 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
Lsm1Q8VC85 Gm21399-201ENSMUST00000180210 597 ntBASIC5.61□□□□□ -1.51
Lsm1Q8VC85 BC065403-201ENSMUST00000180997 1022 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Lsm1Q8VC85 Mir6992-201ENSMUST00000183342 109 ntBASIC5.61□□□□□ -1.51
Lsm1Q8VC85 1700031M16Rik-205ENSMUST00000189907 969 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Lsm1Q8VC85 Ktn1-221ENSMUST00000190535 4112 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Lsm1Q8VC85 Gm37137-201ENSMUST00000195138 2684 ntBASIC5.61□□□□□ -1.51
Lsm1Q8VC85 Gm43361-201ENSMUST00000196562 4690 ntBASIC5.61□□□□□ -1.51
Lsm1Q8VC85 Gm43627-201ENSMUST00000197119 2299 ntBASIC5.61□□□□□ -1.51
Lsm1Q8VC85 Gm35013-201ENSMUST00000197218 832 ntBASIC5.61□□□□□ -1.51
Lsm1Q8VC85 Gm43203-201ENSMUST00000200130 558 ntBASIC5.61□□□□□ -1.51
Lsm1Q8VC85 2210412B16Rik-201ENSMUST00000201281 498 ntBASIC5.61□□□□□ -1.51
Lsm1Q8VC85 Gm43688-201ENSMUST00000202249 310 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Lsm1Q8VC85 Gm45267-201ENSMUST00000211028 522 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Lsm1Q8VC85 Gm7570-201ENSMUST00000215246 698 ntBASIC5.61□□□□□ -1.51
Lsm1Q8VC85 Gm18329-201ENSMUST00000215832 589 ntBASIC5.61□□□□□ -1.51
Lsm1Q8VC85 Olfr1338-203ENSMUST00000216559 2829 ntAPPRIS ALT1 TSL 5 BASIC5.61□□□□□ -1.51
Lsm1Q8VC85 Olfr228-202ENSMUST00000217292 1854 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Lsm1Q8VC85 AC140930.1-201ENSMUST00000221889 389 ntBASIC5.61□□□□□ -1.51
Lsm1Q8VC85 Gm7550-201ENSMUST00000223334 282 ntTSL 5 BASIC5.61□□□□□ -1.51
Lsm1Q8VC85 CT025579.4-201ENSMUST00000224598 627 ntBASIC5.61□□□□□ -1.51
Lsm1Q8VC85 AC166105.1-201ENSMUST00000227512 482 ntBASIC5.61□□□□□ -1.51
Lsm1Q8VC85 Cpa6-201ENSMUST00000035577 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Lsm1Q8VC85 Agbl2-202ENSMUST00000037219 3462 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Lsm1Q8VC85 Ccdc54-201ENSMUST00000062439 1296 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Lsm1Q8VC85 Fastkd1-201ENSMUST00000073152 2865 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Lsm1Q8VC85 Speer4a-201ENSMUST00000079447 2980 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Lsm1Q8VC85 Spata6-203ENSMUST00000084354 2239 ntTSL 5 BASIC5.61□□□□□ -1.51
Lsm1Q8VC85 Fpr-rs6-201ENSMUST00000095636 1020 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Lsm1Q8VC85 Olfr618-201ENSMUST00000098197 957 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Lsm1Q8VC85 Gm38248-201ENSMUST00000193744 5783 ntBASIC5.61□□□□□ -1.51
Lsm1Q8VC85 Olfr1097-202ENSMUST00000217403 4430 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Lsm1Q8VC85 Depdc1a-203ENSMUST00000120272 3323 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Lsm1Q8VC85 Gm13544-201ENSMUST00000131189 2940 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Lsm1Q8VC85 Olfr328-204ENSMUST00000216725 2904 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Lsm1Q8VC85 Mbnl1-207ENSMUST00000192607 4552 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Lsm1Q8VC85 Olfr1173-201ENSMUST00000099830 2268 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 73.4 ms