Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Gm26170-201ENSMUST00000158419 148 ntBASIC5.99□□□□□ -1.45
Ccdc28aQ8CEI3 Obox1-205ENSMUST00000173443 835 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Ccdc28aQ8CEI3 Obox2-204ENSMUST00000174305 834 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Ccdc28aQ8CEI3 Mir7011-201ENSMUST00000183768 73 ntBASIC5.99□□□□□ -1.45
Ccdc28aQ8CEI3 0610031O16Rik-204ENSMUST00000185122 825 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Ccdc28aQ8CEI3 Gm28209-201ENSMUST00000187956 775 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Ccdc28aQ8CEI3 Gm8581-201ENSMUST00000188636 890 ntBASIC5.99□□□□□ -1.45
Ccdc28aQ8CEI3 1700031M16Rik-205ENSMUST00000189907 969 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ccdc28aQ8CEI3 Rrh-205ENSMUST00000196902 1250 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ccdc28aQ8CEI3 Spcs2-206ENSMUST00000208465 736 ntTSL 5 BASIC5.99□□□□□ -1.45
Ccdc28aQ8CEI3 Gm45823-201ENSMUST00000212714 515 ntTSL 5 BASIC5.99□□□□□ -1.45
Ccdc28aQ8CEI3 Mrpl42-202ENSMUST00000217777 455 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Ccdc28aQ8CEI3 AC122937.2-201ENSMUST00000228258 1051 ntBASIC5.99□□□□□ -1.45
Ccdc28aQ8CEI3 Gkn3-201ENSMUST00000032127 856 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ccdc28aQ8CEI3 Klre1-201ENSMUST00000053708 1294 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ccdc28aQ8CEI3 Olfr111-201ENSMUST00000097325 1041 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Ccdc28aQ8CEI3 Olfr556-201ENSMUST00000098219 1023 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Ccdc28aQ8CEI3 Ash1l-201ENSMUST00000090933 11268 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Ccdc28aQ8CEI3 Vmn2r34-201ENSMUST00000173459 3616 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Ccdc28aQ8CEI3 Cfap70-203ENSMUST00000056073 3615 ntAPPRIS P4 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ccdc28aQ8CEI3 Gm5946-202ENSMUST00000182652 2724 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Ccdc28aQ8CEI3 Stk3-205ENSMUST00000226555 2730 ntAPPRIS ALT2 BASIC5.99□□□□□ -1.45
Ccdc28aQ8CEI3 Pja2-203ENSMUST00000172733 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ccdc28aQ8CEI3 Gm19514-201ENSMUST00000206856 4489 ntBASIC5.99□□□□□ -1.45
Ccdc28aQ8CEI3 Armc4-201ENSMUST00000081275 3477 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Ccdc28aQ8CEI3 Flrt2-201ENSMUST00000057324 7099 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ccdc28aQ8CEI3 Ccdc7a-201ENSMUST00000095158 1547 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ccdc28aQ8CEI3 Gm7792-201ENSMUST00000201555 2473 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Ccdc28aQ8CEI3 Bclaf1-201ENSMUST00000043881 5437 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ccdc28aQ8CEI3 AC153962.3-202ENSMUST00000217778 1412 ntTSL 5 BASIC5.99□□□□□ -1.45
Ccdc28aQ8CEI3 Tmc1-201ENSMUST00000039500 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Ccdc28aQ8CEI3 A330015K06Rik-202ENSMUST00000195685 2196 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Ccdc28aQ8CEI3 Olfr97-205ENSMUST00000214848 1861 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Ccdc28aQ8CEI3 Gm17017-201ENSMUST00000161540 2405 ntTSL 5 BASIC5.98□□□□□ -1.45
Ccdc28aQ8CEI3 Bbox1-201ENSMUST00000046233 4030 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Ccdc28aQ8CEI3 Gm34481-201ENSMUST00000214968 3374 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Ccdc28aQ8CEI3 Mup1-203ENSMUST00000107499 797 ntAPPRIS P3 TSL 2 BASIC5.98□□□□□ -1.45
Ccdc28aQ8CEI3 Zfp971-201ENSMUST00000108925 923 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Ccdc28aQ8CEI3 Gm12643-201ENSMUST00000116078 374 ntBASIC5.98□□□□□ -1.45
Ccdc28aQ8CEI3 Gm12439-201ENSMUST00000117162 365 ntBASIC5.98□□□□□ -1.45
Ccdc28aQ8CEI3 Gm13176-201ENSMUST00000117910 477 ntBASIC5.98□□□□□ -1.45
Ccdc28aQ8CEI3 Gm15660-201ENSMUST00000118997 478 ntBASIC5.98□□□□□ -1.45
Ccdc28aQ8CEI3 Gm15859-201ENSMUST00000132069 710 ntTSL 5 BASIC5.98□□□□□ -1.45
Ccdc28aQ8CEI3 Gm26069-201ENSMUST00000157497 277 ntBASIC5.98□□□□□ -1.45
Ccdc28aQ8CEI3 Gm25013-201ENSMUST00000158402 128 ntBASIC5.98□□□□□ -1.45
Ccdc28aQ8CEI3 Gm20778-201ENSMUST00000178524 627 ntBASIC5.98□□□□□ -1.45
Ccdc28aQ8CEI3 5730522E02Rik-208ENSMUST00000179180 450 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
Ccdc28aQ8CEI3 Olfr1025-ps1-201ENSMUST00000188749 921 ntBASIC5.98□□□□□ -1.45
Ccdc28aQ8CEI3 7530428D23Rik-201ENSMUST00000191725 765 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Ccdc28aQ8CEI3 Trav13n-1-201ENSMUST00000198359 331 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Ccdc28aQ8CEI3 Gm17834-201ENSMUST00000204322 891 ntBASIC5.98□□□□□ -1.45
Ccdc28aQ8CEI3 1700093K21Rik-201ENSMUST00000020527 1030 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Ccdc28aQ8CEI3 Gm45044-201ENSMUST00000208078 396 ntTSL 5 BASIC5.98□□□□□ -1.45
Ccdc28aQ8CEI3 Gm31166-201ENSMUST00000209326 288 ntBASIC5.98□□□□□ -1.45
Ccdc28aQ8CEI3 Gm32507-201ENSMUST00000209552 437 ntTSL 5 BASIC5.98□□□□□ -1.45
Ccdc28aQ8CEI3 Gm31432-201ENSMUST00000214727 538 ntTSL 5 BASIC5.98□□□□□ -1.45
Ccdc28aQ8CEI3 Gm11427-204ENSMUST00000216233 999 ntTSL 5 BASIC5.98□□□□□ -1.45
Ccdc28aQ8CEI3 Gm18620-201ENSMUST00000222295 324 ntBASIC5.98□□□□□ -1.45
Ccdc28aQ8CEI3 Rpl29-202ENSMUST00000098994 583 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
Ccdc28aQ8CEI3 Gm14391-201ENSMUST00000099028 473 ntTSL 5 BASIC5.98□□□□□ -1.45
Ccdc28aQ8CEI3 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC5.98□□□□□ -1.45
Ccdc28aQ8CEI3 Ugt1a7c-202ENSMUST00000113135 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Ccdc28aQ8CEI3 Mir99ahg-201ENSMUST00000068704 2858 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Ccdc28aQ8CEI3 Olfr535-203ENSMUST00000213715 5033 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Ccdc28aQ8CEI3 Mfn1-202ENSMUST00000118286 2789 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
Ccdc28aQ8CEI3 Ttc37-205ENSMUST00000224386 6976 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Ccdc28aQ8CEI3 AC117570.1-201ENSMUST00000214015 1886 ntTSL 5 BASIC5.98□□□□□ -1.45
Ccdc28aQ8CEI3 AC153144.1-201ENSMUST00000221759 3139 ntBASIC5.98□□□□□ -1.45
Ccdc28aQ8CEI3 Ube2u-201ENSMUST00000092730 1435 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Ccdc28aQ8CEI3 AC154734.1-201ENSMUST00000219957 2141 ntBASIC5.98□□□□□ -1.45
Ccdc28aQ8CEI3 Lcp2-201ENSMUST00000052413 3644 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Ccdc28aQ8CEI3 Olfr202-203ENSMUST00000217485 1321 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Ccdc28aQ8CEI3 Spam1-201ENSMUST00000031693 2013 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Ccdc28aQ8CEI3 Adgb-206ENSMUST00000208717 4902 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
Ccdc28aQ8CEI3 Lrrtm4-203ENSMUST00000126399 3050 ntAPPRIS ALT1 TSL 5 BASIC5.97□□□□□ -1.45
Ccdc28aQ8CEI3 Gm43180-201ENSMUST00000197541 2886 ntBASIC5.97□□□□□ -1.45
Ccdc28aQ8CEI3 Zfp583-202ENSMUST00000108560 2154 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Ccdc28aQ8CEI3 AC192616.2-201ENSMUST00000221482 3841 ntBASIC5.97□□□□□ -1.45
Ccdc28aQ8CEI3 2900079G21Rik-204ENSMUST00000163302 2764 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Ccdc28aQ8CEI3 Gm39321-201ENSMUST00000216597 2075 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Ccdc28aQ8CEI3 Olfr109-202ENSMUST00000214668 5861 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Ccdc28aQ8CEI3 Gm14857-201ENSMUST00000117862 3185 ntBASIC5.97□□□□□ -1.45
Ccdc28aQ8CEI3 Myct1-201ENSMUST00000051809 2845 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Ccdc28aQ8CEI3 Gm6729-202ENSMUST00000219485 2209 ntTSL 5 BASIC5.97□□□□□ -1.45
Ccdc28aQ8CEI3 Gm44695-201ENSMUST00000205567 1631 ntBASIC5.97□□□□□ -1.45
Ccdc28aQ8CEI3 Slc17a4-201ENSMUST00000021769 1604 ntAPPRIS P2 TSL 5 BASIC5.97□□□□□ -1.45
Ccdc28aQ8CEI3 Mnat1-202ENSMUST00000187549 3688 ntTSL 5 BASIC5.97□□□□□ -1.45
Ccdc28aQ8CEI3 Gm10378-201ENSMUST00000100696 429 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Ccdc28aQ8CEI3 Gm22284-201ENSMUST00000104132 132 ntBASIC5.97□□□□□ -1.45
Ccdc28aQ8CEI3 Gm11271-201ENSMUST00000116054 440 ntBASIC5.97□□□□□ -1.45
Ccdc28aQ8CEI3 Hspe1-ps5-201ENSMUST00000118080 297 ntBASIC5.97□□□□□ -1.45
Ccdc28aQ8CEI3 Tmem216-205ENSMUST00000145210 774 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Ccdc28aQ8CEI3 Gm12504-202ENSMUST00000148026 306 ntBASIC5.97□□□□□ -1.45
Ccdc28aQ8CEI3 Tmem216-206ENSMUST00000154383 927 ntAPPRIS P1 TSL 3 BASIC5.97□□□□□ -1.45
Ccdc28aQ8CEI3 Vmn1r101-201ENSMUST00000164245 924 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Ccdc28aQ8CEI3 Vmn1r119-201ENSMUST00000164683 924 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Ccdc28aQ8CEI3 Vmn1r149-201ENSMUST00000165916 924 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Ccdc28aQ8CEI3 Cabcoco1-202ENSMUST00000166919 1016 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
Ccdc28aQ8CEI3 Vmn1r123-201ENSMUST00000166948 924 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Ccdc28aQ8CEI3 Gm4187-201ENSMUST00000172551 924 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms