Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm37897-201ENSMUST00000192613 3561 ntBASIC7.06□□□□□ -1.28
Vps53Q8CCB4 Gm38081-201ENSMUST00000192680 1645 ntBASIC7.06□□□□□ -1.28
Vps53Q8CCB4 Olfr477-202ENSMUST00000214677 2930 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Vps53Q8CCB4 Sorbs2-231ENSMUST00000171337 5651 ntAPPRIS P4 TSL 1 (best) BASIC7.06□□□□□ -1.28
Vps53Q8CCB4 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Vps53Q8CCB4 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Vps53Q8CCB4 Gm10936-201ENSMUST00000105264 252 ntBASIC7.06□□□□□ -1.28
Vps53Q8CCB4 Gm13090-201ENSMUST00000105667 746 ntAPPRIS P1 TSL 3 BASIC7.06□□□□□ -1.28
Vps53Q8CCB4 Gm22952-201ENSMUST00000116720 120 ntBASIC7.06□□□□□ -1.28
Vps53Q8CCB4 Gm14606-201ENSMUST00000117078 1155 ntBASIC7.06□□□□□ -1.28
Vps53Q8CCB4 Gm11624-201ENSMUST00000118579 1041 ntBASIC7.06□□□□□ -1.28
Vps53Q8CCB4 Gm7700-201ENSMUST00000120273 970 ntBASIC7.06□□□□□ -1.28
Vps53Q8CCB4 Olfr1004-ps1-201ENSMUST00000120361 580 ntBASIC7.06□□□□□ -1.28
Vps53Q8CCB4 Gm11848-201ENSMUST00000121207 973 ntBASIC7.06□□□□□ -1.28
Vps53Q8CCB4 Gm13489-201ENSMUST00000121234 971 ntBASIC7.06□□□□□ -1.28
Vps53Q8CCB4 Gm7580-201ENSMUST00000132826 497 ntTSL 3 BASIC7.06□□□□□ -1.28
Vps53Q8CCB4 4930412B13Rik-201ENSMUST00000149239 1276 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Vps53Q8CCB4 Gm24065-201ENSMUST00000157487 264 ntBASIC7.06□□□□□ -1.28
Vps53Q8CCB4 Gm22210-201ENSMUST00000158101 144 ntBASIC7.06□□□□□ -1.28
Vps53Q8CCB4 Gm20528-202ENSMUST00000174821 802 ntTSL 3 BASIC7.06□□□□□ -1.28
Vps53Q8CCB4 Gm25065-201ENSMUST00000177914 132 ntBASIC7.06□□□□□ -1.28
Vps53Q8CCB4 Trav6d-7-201ENSMUST00000178650 358 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Vps53Q8CCB4 Trav6n-7-201ENSMUST00000179607 358 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Vps53Q8CCB4 Gm25891-201ENSMUST00000180050 132 ntBASIC7.06□□□□□ -1.28
Vps53Q8CCB4 Gm2539-203ENSMUST00000181352 746 ntBASIC7.06□□□□□ -1.28
Vps53Q8CCB4 1700108F19Rik-203ENSMUST00000188798 619 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Vps53Q8CCB4 1700108F19Rik-206ENSMUST00000191266 857 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Vps53Q8CCB4 Gm43744-201ENSMUST00000196387 688 ntBASIC7.06□□□□□ -1.28
Vps53Q8CCB4 Trav6d-6-201ENSMUST00000197754 344 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Vps53Q8CCB4 Gm45479-201ENSMUST00000211613 802 ntTSL 3 BASIC7.06□□□□□ -1.28
Vps53Q8CCB4 Olfr928-ps1-201ENSMUST00000213313 237 ntBASIC7.06□□□□□ -1.28
Vps53Q8CCB4 CT485607.3-201ENSMUST00000213361 672 ntBASIC7.06□□□□□ -1.28
Vps53Q8CCB4 AC127242.4-201ENSMUST00000221242 470 ntBASIC7.06□□□□□ -1.28
Vps53Q8CCB4 AL645546.2-201ENSMUST00000224526 265 ntBASIC7.06□□□□□ -1.28
Vps53Q8CCB4 AC131033.2-201ENSMUST00000228138 1011 ntBASIC7.06□□□□□ -1.28
Vps53Q8CCB4 Pate4-201ENSMUST00000034610 1072 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Vps53Q8CCB4 Vmn1r11-201ENSMUST00000071304 900 ntAPPRIS P2 BASIC7.06□□□□□ -1.28
Vps53Q8CCB4 Olfr146-201ENSMUST00000073671 1061 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Vps53Q8CCB4 Olfr804-201ENSMUST00000077312 945 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Vps53Q8CCB4 Defb18-201ENSMUST00000097818 258 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Vps53Q8CCB4 Tmem45a2-203ENSMUST00000227043 1447 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Vps53Q8CCB4 F13b-201ENSMUST00000027615 2379 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Vps53Q8CCB4 AC124516.1-201ENSMUST00000221845 3544 ntBASIC7.06□□□□□ -1.28
Vps53Q8CCB4 Vmn2r25-201ENSMUST00000162046 2568 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Vps53Q8CCB4 Gm37951-201ENSMUST00000192963 3032 ntBASIC7.06□□□□□ -1.28
Vps53Q8CCB4 Clca4b-201ENSMUST00000098549 2997 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Vps53Q8CCB4 Mbd3l2-201ENSMUST00000051008 2075 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Vps53Q8CCB4 Cyp2c65-201ENSMUST00000087236 1928 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Vps53Q8CCB4 Il18rap-201ENSMUST00000027237 4889 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Vps53Q8CCB4 Pirt-201ENSMUST00000123434 4200 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Vps53Q8CCB4 Gm30122-202ENSMUST00000218662 1556 ntTSL 5 BASIC7.05□□□□□ -1.28
Vps53Q8CCB4 Vmn2r113-201ENSMUST00000170322 2571 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Vps53Q8CCB4 Fastkd5-202ENSMUST00000179273 2424 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Vps53Q8CCB4 Igkv16-104-201ENSMUST00000103323 378 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Vps53Q8CCB4 Ighv1-64-201ENSMUST00000103535 405 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Vps53Q8CCB4 Gm13193-201ENSMUST00000117275 225 ntBASIC7.05□□□□□ -1.28
Vps53Q8CCB4 Gm14173-201ENSMUST00000117690 278 ntBASIC7.05□□□□□ -1.28
Vps53Q8CCB4 Olfr607-201ENSMUST00000119283 915 ntAPPRIS ALT2 BASIC7.05□□□□□ -1.28
Vps53Q8CCB4 Mup-ps28-201ENSMUST00000120686 289 ntBASIC7.05□□□□□ -1.28
Vps53Q8CCB4 Gm12399-201ENSMUST00000121475 446 ntBASIC7.05□□□□□ -1.28
Vps53Q8CCB4 Gstm2-201ENSMUST00000012348 1064 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Vps53Q8CCB4 Mcpt2-201ENSMUST00000015576 1061 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Vps53Q8CCB4 Gm23954-201ENSMUST00000157213 353 ntBASIC7.05□□□□□ -1.28
Vps53Q8CCB4 Clec4a2-204ENSMUST00000161365 918 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
Vps53Q8CCB4 Gm2012-202ENSMUST00000163263 892 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Vps53Q8CCB4 Gm6121-202ENSMUST00000167438 893 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Vps53Q8CCB4 Gm26804-201ENSMUST00000181248 1017 ntTSL 5 BASIC7.05□□□□□ -1.28
Vps53Q8CCB4 Gm38303-201ENSMUST00000192603 536 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Vps53Q8CCB4 Gm42865-201ENSMUST00000197981 613 ntTSL 3 BASIC7.05□□□□□ -1.28
Vps53Q8CCB4 Gm43044-201ENSMUST00000198091 379 ntBASIC7.05□□□□□ -1.28
Vps53Q8CCB4 Mir6906-201ENSMUST00000198998 58 ntBASIC7.05□□□□□ -1.28
Vps53Q8CCB4 6720469O03Rik-201ENSMUST00000206785 1201 ntBASIC7.05□□□□□ -1.28
Vps53Q8CCB4 Gm44837-201ENSMUST00000206863 717 ntBASIC7.05□□□□□ -1.28
Vps53Q8CCB4 Gm45185-201ENSMUST00000207556 404 ntBASIC7.05□□□□□ -1.28
Vps53Q8CCB4 Gm45069-201ENSMUST00000208604 317 ntTSL 2 BASIC7.05□□□□□ -1.28
Vps53Q8CCB4 Cd209a-204ENSMUST00000208960 844 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
Vps53Q8CCB4 Gm33619-201ENSMUST00000215633 662 ntTSL 2 BASIC7.05□□□□□ -1.28
Vps53Q8CCB4 1190001M18Rik-201ENSMUST00000215937 1270 ntBASIC7.05□□□□□ -1.28
Vps53Q8CCB4 Gm26163-201ENSMUST00000083792 178 ntBASIC7.05□□□□□ -1.28
Vps53Q8CCB4 Slc35a5-201ENSMUST00000023344 4233 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Vps53Q8CCB4 1110059G10Rik-201ENSMUST00000035154 3361 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Vps53Q8CCB4 Pbrm1-202ENSMUST00000022474 4843 ntTSL 5 BASIC7.05□□□□□ -1.28
Vps53Q8CCB4 Vwc2l-201ENSMUST00000053922 4655 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Vps53Q8CCB4 Tbpl2-201ENSMUST00000080453 1379 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Vps53Q8CCB4 Adam34-202ENSMUST00000212185 2335 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Vps53Q8CCB4 Mcoln3-201ENSMUST00000039450 2991 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Vps53Q8CCB4 Gm42894-201ENSMUST00000200788 3390 ntBASIC7.05□□□□□ -1.28
Vps53Q8CCB4 Olfr1385-202ENSMUST00000214948 4412 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Vps53Q8CCB4 Olfr114-203ENSMUST00000216249 1457 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Vps53Q8CCB4 Atad2-208ENSMUST00000228783 3472 ntAPPRIS ALT2 BASIC7.04□□□□□ -1.28
Vps53Q8CCB4 Clec12a-201ENSMUST00000065289 2502 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Vps53Q8CCB4 1700093K21Rik-204ENSMUST00000169264 1320 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Vps53Q8CCB4 Vmn1r52-206ENSMUST00000228385 2769 ntBASIC7.04□□□□□ -1.28
Vps53Q8CCB4 C230038L03Rik-201ENSMUST00000129409 2632 ntTSL 2 BASIC7.04□□□□□ -1.28
Vps53Q8CCB4 Gm32736-201ENSMUST00000200427 2701 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Vps53Q8CCB4 Ptprd-218ENSMUST00000174180 5694 ntTSL 5 BASIC7.04□□□□□ -1.28
Vps53Q8CCB4 Hmgn5-201ENSMUST00000033597 1934 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Vps53Q8CCB4 Cyp39a1-201ENSMUST00000170988 3053 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Vps53Q8CCB4 Olfr947-ps1-202ENSMUST00000214936 2168 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
Vps53Q8CCB4 4932416K20Rik-201ENSMUST00000093229 3554 ntBASIC7.04□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms