Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Nwd1-209ENSMUST00000228312 10789 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
Trim47Q8C0E3 Uspl1-203ENSMUST00000117878 2931 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Trim47Q8C0E3 Gm44021-201ENSMUST00000203055 3516 ntBASIC7.89□□□□□ -1.15
Trim47Q8C0E3 Gm4961-201ENSMUST00000197982 2249 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Trim47Q8C0E3 Zfp640-202ENSMUST00000224116 1562 ntBASIC7.88□□□□□ -1.15
Trim47Q8C0E3 4930509J09Rik-201ENSMUST00000194514 1526 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Trim47Q8C0E3 Tnik-214ENSMUST00000162485 3918 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
Trim47Q8C0E3 Ppp4r4-202ENSMUST00000187155 2675 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
Trim47Q8C0E3 Phlpp2-201ENSMUST00000034175 7839 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Trim47Q8C0E3 Luzp4-201ENSMUST00000101185 2023 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
Trim47Q8C0E3 Olfr690-202ENSMUST00000211006 2048 ntAPPRIS P1 TSL 2 BASIC7.88□□□□□ -1.15
Trim47Q8C0E3 Patj-204ENSMUST00000107029 4342 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Trim47Q8C0E3 Elmod2-201ENSMUST00000053902 4319 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Trim47Q8C0E3 Gm9268-201ENSMUST00000166914 2586 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
Trim47Q8C0E3 Maats1-202ENSMUST00000114740 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Trim47Q8C0E3 Dock2-201ENSMUST00000093193 6409 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Trim47Q8C0E3 Mapk8-205ENSMUST00000111945 5756 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Trim47Q8C0E3 Gm29571-201ENSMUST00000191547 1909 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Trim47Q8C0E3 Gm26996-201ENSMUST00000204418 1359 ntBASIC7.88□□□□□ -1.15
Trim47Q8C0E3 Wdr37-202ENSMUST00000054251 4626 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
Trim47Q8C0E3 Cops2-202ENSMUST00000110462 1853 ntTSL 5 BASIC7.88□□□□□ -1.15
Trim47Q8C0E3 CT010470.1-201ENSMUST00000225364 1876 ntBASIC7.88□□□□□ -1.15
Trim47Q8C0E3 Mms19-217ENSMUST00000171561 6607 ntAPPRIS P2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Trim47Q8C0E3 Usp40-201ENSMUST00000040783 5049 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
Trim47Q8C0E3 Gm26807-201ENSMUST00000181132 4363 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Trim47Q8C0E3 Gm26419-201ENSMUST00000104272 133 ntBASIC7.88□□□□□ -1.15
Trim47Q8C0E3 S100a1-202ENSMUST00000107340 577 ntTSL 2 BASIC7.88□□□□□ -1.15
Trim47Q8C0E3 Epc1-203ENSMUST00000115870 3817 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Trim47Q8C0E3 Rpl31-ps10-201ENSMUST00000116034 378 ntBASIC7.88□□□□□ -1.15
Trim47Q8C0E3 Gm13650-201ENSMUST00000117729 433 ntBASIC7.88□□□□□ -1.15
Trim47Q8C0E3 Gm13473-201ENSMUST00000119289 367 ntBASIC7.88□□□□□ -1.15
Trim47Q8C0E3 Rpl31-ps11-201ENSMUST00000119898 377 ntBASIC7.88□□□□□ -1.15
Trim47Q8C0E3 Rpl31-ps12-201ENSMUST00000119957 375 ntBASIC7.88□□□□□ -1.15
Trim47Q8C0E3 Gm15123-201ENSMUST00000138988 339 ntTSL 3 BASIC7.88□□□□□ -1.15
Trim47Q8C0E3 C230035I16Rik-201ENSMUST00000141543 623 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Trim47Q8C0E3 Gm23542-201ENSMUST00000158208 96 ntBASIC7.88□□□□□ -1.15
Trim47Q8C0E3 Gm16138-201ENSMUST00000159341 821 ntBASIC7.88□□□□□ -1.15
Trim47Q8C0E3 Gm6401-202ENSMUST00000164232 618 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
Trim47Q8C0E3 Gm18560-201ENSMUST00000173463 1123 ntBASIC7.88□□□□□ -1.15
Trim47Q8C0E3 Rpl31-ps8-201ENSMUST00000181935 378 ntBASIC7.88□□□□□ -1.15
Trim47Q8C0E3 Gm8245-201ENSMUST00000182434 987 ntBASIC7.88□□□□□ -1.15
Trim47Q8C0E3 Mir6987-201ENSMUST00000184789 73 ntBASIC7.88□□□□□ -1.15
Trim47Q8C0E3 Gm3605-201ENSMUST00000185858 440 ntBASIC7.88□□□□□ -1.15
Trim47Q8C0E3 Gm29383-201ENSMUST00000188284 480 ntBASIC7.88□□□□□ -1.15
Trim47Q8C0E3 Ptma-204ENSMUST00000188533 593 ntTSL 3 BASIC7.88□□□□□ -1.15
Trim47Q8C0E3 1700047L14Rik-201ENSMUST00000189659 511 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Trim47Q8C0E3 Gm29552-201ENSMUST00000190548 660 ntBASIC7.88□□□□□ -1.15
Trim47Q8C0E3 Platr10-201ENSMUST00000190602 1026 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Trim47Q8C0E3 Rpl31-206ENSMUST00000195123 356 ntTSL 3 BASIC7.88□□□□□ -1.15
Trim47Q8C0E3 4933438B17Rik-202ENSMUST00000196374 576 ntTSL 3 BASIC7.88□□□□□ -1.15
Trim47Q8C0E3 Gm42581-201ENSMUST00000201774 966 ntBASIC7.88□□□□□ -1.15
Trim47Q8C0E3 Gm44225-201ENSMUST00000203582 186 ntBASIC7.88□□□□□ -1.15
Trim47Q8C0E3 Pde6h-203ENSMUST00000204382 211 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Trim47Q8C0E3 Gm44048-201ENSMUST00000204531 361 ntBASIC7.88□□□□□ -1.15
Trim47Q8C0E3 Cd209d-202ENSMUST00000209176 672 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Trim47Q8C0E3 AC132384.9-201ENSMUST00000218085 277 ntBASIC7.88□□□□□ -1.15
Trim47Q8C0E3 Gm19168-201ENSMUST00000218804 1091 ntBASIC7.88□□□□□ -1.15
Trim47Q8C0E3 Ctla2b-201ENSMUST00000021884 842 ntAPPRIS P4 TSL 1 (best) BASIC7.88□□□□□ -1.15
Trim47Q8C0E3 CT030135.1-201ENSMUST00000223760 570 ntBASIC7.88□□□□□ -1.15
Trim47Q8C0E3 AC122397.3-201ENSMUST00000227097 527 ntBASIC7.88□□□□□ -1.15
Trim47Q8C0E3 Gm9800-201ENSMUST00000052615 336 ntBASIC7.88□□□□□ -1.15
Trim47Q8C0E3 Olfr904-201ENSMUST00000058153 933 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
Trim47Q8C0E3 Rpl31-ps4-201ENSMUST00000079114 390 ntBASIC7.88□□□□□ -1.15
Trim47Q8C0E3 Gm6887-201ENSMUST00000080945 482 ntBASIC7.88□□□□□ -1.15
Trim47Q8C0E3 Rpl31-ps9-201ENSMUST00000086596 378 ntBASIC7.88□□□□□ -1.15
Trim47Q8C0E3 Olfr1087-201ENSMUST00000099877 942 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
Trim47Q8C0E3 Gm42534-201ENSMUST00000196063 1754 ntBASIC7.88□□□□□ -1.15
Trim47Q8C0E3 Fmn1-209ENSMUST00000161731 4262 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Trim47Q8C0E3 C330024D21Rik-203ENSMUST00000202828 1714 ntTSL 5 BASIC7.88□□□□□ -1.15
Trim47Q8C0E3 Gpbp1l1-201ENSMUST00000030460 3588 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Trim47Q8C0E3 Sfmbt2-205ENSMUST00000116594 7821 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
Trim47Q8C0E3 Gm29048-202ENSMUST00000190399 1601 ntTSL 5 BASIC7.88□□□□□ -1.15
Trim47Q8C0E3 Sox5-214ENSMUST00000170367 7184 ntTSL 5 BASIC7.88□□□□□ -1.15
Trim47Q8C0E3 BC053393-201ENSMUST00000050937 2020 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Trim47Q8C0E3 Ice2-201ENSMUST00000034761 4169 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Trim47Q8C0E3 Osbpl6-201ENSMUST00000077972 8037 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Trim47Q8C0E3 Rftn2-201ENSMUST00000027121 3677 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Trim47Q8C0E3 Tmem229b-202ENSMUST00000070174 3656 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Trim47Q8C0E3 Wdfy4-201ENSMUST00000061753 9681 ntAPPRIS P2 TSL 5 BASIC7.88□□□□□ -1.15
Trim47Q8C0E3 Gm44000-201ENSMUST00000205038 1478 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Trim47Q8C0E3 Pcdh17-201ENSMUST00000071370 11451 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Trim47Q8C0E3 Ssbp1-202ENSMUST00000114779 4398 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Trim47Q8C0E3 Gdpd4-202ENSMUST00000170049 1899 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
Trim47Q8C0E3 Gja5-201ENSMUST00000072600 3109 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Trim47Q8C0E3 AC107763.1-202ENSMUST00000225021 2663 ntBASIC7.87□□□□□ -1.15
Trim47Q8C0E3 Gm37114-201ENSMUST00000195065 1804 ntBASIC7.87□□□□□ -1.15
Trim47Q8C0E3 Ptrhd1-201ENSMUST00000179139 3840 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Trim47Q8C0E3 Etv1-201ENSMUST00000095767 6576 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Trim47Q8C0E3 Gm7361-201ENSMUST00000074148 2995 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Trim47Q8C0E3 Hps5-203ENSMUST00000107654 4422 ntAPPRIS P3 TSL 5 BASIC7.87□□□□□ -1.15
Trim47Q8C0E3 Gm6757-201ENSMUST00000189810 1706 ntBASIC7.87□□□□□ -1.15
Trim47Q8C0E3 Avpr1b-201ENSMUST00000027690 4023 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Trim47Q8C0E3 Gm17137-201ENSMUST00000164106 4371 ntBASIC7.87□□□□□ -1.15
Trim47Q8C0E3 9330199G10Rik-201ENSMUST00000221601 2072 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Trim47Q8C0E3 Slc26a2-201ENSMUST00000037603 2802 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Trim47Q8C0E3 Gm13301-201ENSMUST00000121728 2446 ntBASIC7.87□□□□□ -1.15
Trim47Q8C0E3 Atp8b4-201ENSMUST00000040128 5693 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
Trim47Q8C0E3 Trpc4-201ENSMUST00000029311 3473 ntAPPRIS P3 TSL 1 (best) BASIC7.87□□□□□ -1.15
Trim47Q8C0E3 Unc13b-215ENSMUST00000207569 14754 ntTSL 5 BASIC7.87□□□□□ -1.15
Trim47Q8C0E3 Gm22774-201ENSMUST00000102084 109 ntBASIC7.87□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms