Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm5799-201ENSMUST00000169023 1314 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Trub1Q8C0D0 1700093K21Rik-204ENSMUST00000169264 1320 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Trub1Q8C0D0 Zpld1-201ENSMUST00000036412 2589 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Trub1Q8C0D0 Olfr441-202ENSMUST00000213649 2402 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
Trub1Q8C0D0 Gm37773-201ENSMUST00000194141 2120 ntBASIC5.95□□□□□ -1.46
Trub1Q8C0D0 Rc3h2-202ENSMUST00000112934 8948 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Trub1Q8C0D0 Nebl-213ENSMUST00000177966 1690 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Trub1Q8C0D0 Gm44660-201ENSMUST00000207134 2465 ntBASIC5.94□□□□□ -1.46
Trub1Q8C0D0 Rapgef6-204ENSMUST00000108894 3475 ntTSL 5 BASIC5.94□□□□□ -1.46
Trub1Q8C0D0 Cdc27-201ENSMUST00000093923 5425 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Trub1Q8C0D0 Sgip1-205ENSMUST00000106882 6061 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
Trub1Q8C0D0 Gm2080-201ENSMUST00000211299 1573 ntBASIC5.94□□□□□ -1.46
Trub1Q8C0D0 Gm6866-202ENSMUST00000206653 3081 ntTSL 5 BASIC5.94□□□□□ -1.46
Trub1Q8C0D0 Gm16423-201ENSMUST00000120078 947 ntBASIC5.94□□□□□ -1.46
Trub1Q8C0D0 Gm25439-201ENSMUST00000158280 131 ntBASIC5.94□□□□□ -1.46
Trub1Q8C0D0 Gm24363-201ENSMUST00000158440 311 ntBASIC5.94□□□□□ -1.46
Trub1Q8C0D0 Tmem258-204ENSMUST00000166412 447 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Trub1Q8C0D0 Gm17206-201ENSMUST00000168123 577 ntTSL 5 BASIC5.94□□□□□ -1.46
Trub1Q8C0D0 BC050972-202ENSMUST00000169153 467 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Trub1Q8C0D0 Gm22655-201ENSMUST00000174949 96 ntBASIC5.94□□□□□ -1.46
Trub1Q8C0D0 Gm22932-201ENSMUST00000175510 72 ntBASIC5.94□□□□□ -1.46
Trub1Q8C0D0 Gm19560-201ENSMUST00000177510 514 ntBASIC5.94□□□□□ -1.46
Trub1Q8C0D0 Gm24300-201ENSMUST00000177809 109 ntBASIC5.94□□□□□ -1.46
Trub1Q8C0D0 Gm24017-201ENSMUST00000178726 109 ntBASIC5.94□□□□□ -1.46
Trub1Q8C0D0 Gm2058-201ENSMUST00000178791 560 ntBASIC5.94□□□□□ -1.46
Trub1Q8C0D0 Gm23952-201ENSMUST00000179380 109 ntBASIC5.94□□□□□ -1.46
Trub1Q8C0D0 Gm4832-201ENSMUST00000182679 399 ntBASIC5.94□□□□□ -1.46
Trub1Q8C0D0 Igkv12-67-201ENSMUST00000197806 354 ntBASIC5.94□□□□□ -1.46
Trub1Q8C0D0 Gm18205-201ENSMUST00000209215 841 ntBASIC5.94□□□□□ -1.46
Trub1Q8C0D0 Gm31166-201ENSMUST00000209326 288 ntBASIC5.94□□□□□ -1.46
Trub1Q8C0D0 Gm38590-201ENSMUST00000209515 970 ntTSL 5 BASIC5.94□□□□□ -1.46
Trub1Q8C0D0 Axdnd1-210ENSMUST00000212747 1238 ntTSL 5 BASIC5.94□□□□□ -1.46
Trub1Q8C0D0 AC112680.2-201ENSMUST00000213119 595 ntBASIC5.94□□□□□ -1.46
Trub1Q8C0D0 AC133650.1-201ENSMUST00000217243 578 ntBASIC5.94□□□□□ -1.46
Trub1Q8C0D0 Gm34574-201ENSMUST00000217795 1240 ntTSL 5 BASIC5.94□□□□□ -1.46
Trub1Q8C0D0 Zfand4-204ENSMUST00000221069 501 ntTSL 3 BASIC5.94□□□□□ -1.46
Trub1Q8C0D0 Gm6068-201ENSMUST00000222270 387 ntBASIC5.94□□□□□ -1.46
Trub1Q8C0D0 AC165092.4-201ENSMUST00000225025 679 ntBASIC5.94□□□□□ -1.46
Trub1Q8C0D0 Gm22684-201ENSMUST00000082849 132 ntBASIC5.94□□□□□ -1.46
Trub1Q8C0D0 Olfr568-201ENSMUST00000098216 942 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Trub1Q8C0D0 Olfr994-201ENSMUST00000099925 945 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Trub1Q8C0D0 Gm8853-201ENSMUST00000198366 1344 ntBASIC5.94□□□□□ -1.46
Trub1Q8C0D0 Olfr1115-202ENSMUST00000213513 3604 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Trub1Q8C0D0 Trim12a-201ENSMUST00000070943 1531 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Trub1Q8C0D0 Nol8-201ENSMUST00000021824 4242 ntAPPRIS P2 TSL 5 BASIC5.94□□□□□ -1.46
Trub1Q8C0D0 Klf7-202ENSMUST00000114086 7662 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Trub1Q8C0D0 Slc19a3-203ENSMUST00000164473 1550 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Trub1Q8C0D0 4930503L19Rik-204ENSMUST00000212155 1585 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Trub1Q8C0D0 Gm43088-201ENSMUST00000197530 2347 ntBASIC5.93□□□□□ -1.46
Trub1Q8C0D0 Cdh17-202ENSMUST00000108303 3287 ntTSL 2 BASIC5.93□□□□□ -1.46
Trub1Q8C0D0 Vmn2r3-202ENSMUST00000176328 2748 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
Trub1Q8C0D0 Atp8a2-201ENSMUST00000080368 12886 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Trub1Q8C0D0 Gm43330-201ENSMUST00000199706 2153 ntBASIC5.93□□□□□ -1.46
Trub1Q8C0D0 Nexn-201ENSMUST00000046045 2564 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Trub1Q8C0D0 Gm45671-201ENSMUST00000210229 3920 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Trub1Q8C0D0 Gm16523-202ENSMUST00000203640 4750 ntBASIC5.93□□□□□ -1.46
Trub1Q8C0D0 Lcp2-201ENSMUST00000052413 3644 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Trub1Q8C0D0 Gm23294-201ENSMUST00000104150 164 ntBASIC5.93□□□□□ -1.46
Trub1Q8C0D0 Gm13084-202ENSMUST00000105769 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Trub1Q8C0D0 Klrb1-201ENSMUST00000112110 724 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Trub1Q8C0D0 Gm11105-201ENSMUST00000112781 478 ntBASIC5.93□□□□□ -1.46
Trub1Q8C0D0 Gm14805-201ENSMUST00000120172 340 ntBASIC5.93□□□□□ -1.46
Trub1Q8C0D0 Asxl3-202ENSMUST00000120223 11485 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Trub1Q8C0D0 Gm11852-201ENSMUST00000120806 222 ntBASIC5.93□□□□□ -1.46
Trub1Q8C0D0 Sox5os3-202ENSMUST00000154167 765 ntTSL 3 BASIC5.93□□□□□ -1.46
Trub1Q8C0D0 Gm22492-201ENSMUST00000157192 297 ntBASIC5.93□□□□□ -1.46
Trub1Q8C0D0 Gm26046-201ENSMUST00000157312 166 ntBASIC5.93□□□□□ -1.46
Trub1Q8C0D0 Gm21772-201ENSMUST00000169213 478 ntBASIC5.93□□□□□ -1.46
Trub1Q8C0D0 Adam3-210ENSMUST00000171611 1202 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Trub1Q8C0D0 Gm17126-201ENSMUST00000172276 523 ntBASIC5.93□□□□□ -1.46
Trub1Q8C0D0 Mir5125-201ENSMUST00000175240 79 ntBASIC5.93□□□□□ -1.46
Trub1Q8C0D0 Rpain-213ENSMUST00000178822 566 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Trub1Q8C0D0 Gm28351-201ENSMUST00000186261 559 ntTSL 5 BASIC5.93□□□□□ -1.46
Trub1Q8C0D0 Gm2367-201ENSMUST00000192374 472 ntBASIC5.93□□□□□ -1.46
Trub1Q8C0D0 6430511E19Rik-201ENSMUST00000192772 3835 ntBASIC5.93□□□□□ -1.46
Trub1Q8C0D0 Gm43148-201ENSMUST00000198237 520 ntBASIC5.93□□□□□ -1.46
Trub1Q8C0D0 Gm44432-201ENSMUST00000203342 938 ntBASIC5.93□□□□□ -1.46
Trub1Q8C0D0 4933430N04Rik-202ENSMUST00000208031 1146 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Trub1Q8C0D0 Gm45596-201ENSMUST00000209279 434 ntBASIC5.93□□□□□ -1.46
Trub1Q8C0D0 Gm45883-201ENSMUST00000210131 853 ntTSL 3 BASIC5.93□□□□□ -1.46
Trub1Q8C0D0 Rab7-ps1-201ENSMUST00000213253 622 ntBASIC5.93□□□□□ -1.46
Trub1Q8C0D0 CT025660.1-201ENSMUST00000216094 457 ntTSL 5 BASIC5.93□□□□□ -1.46
Trub1Q8C0D0 AC122188.1-201ENSMUST00000217534 312 ntBASIC5.93□□□□□ -1.46
Trub1Q8C0D0 Gm5830-201ENSMUST00000049117 443 ntBASIC5.93□□□□□ -1.46
Trub1Q8C0D0 Gm7887-201ENSMUST00000056948 537 ntBASIC5.93□□□□□ -1.46
Trub1Q8C0D0 Rps11-ps4-201ENSMUST00000062226 474 ntBASIC5.93□□□□□ -1.46
Trub1Q8C0D0 Gm18359-201ENSMUST00000173024 1459 ntBASIC5.93□□□□□ -1.46
Trub1Q8C0D0 Olfr994-204ENSMUST00000217218 1460 ntAPPRIS P1 TSL 3 BASIC5.93□□□□□ -1.46
Trub1Q8C0D0 Senp7-203ENSMUST00000089362 4825 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Trub1Q8C0D0 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Trub1Q8C0D0 Olfr303-205ENSMUST00000216409 4106 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Trub1Q8C0D0 Gm38198-201ENSMUST00000191772 3581 ntBASIC5.93□□□□□ -1.46
Trub1Q8C0D0 Enox2-201ENSMUST00000033437 3170 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Trub1Q8C0D0 Gm21655-202ENSMUST00000199295 2975 ntTSL 5 BASIC5.93□□□□□ -1.46
Trub1Q8C0D0 Gm21680-201ENSMUST00000200447 2975 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Trub1Q8C0D0 CT009504.2-201ENSMUST00000217951 2960 ntTSL 5 BASIC5.93□□□□□ -1.46
Trub1Q8C0D0 Gm4011-201ENSMUST00000174657 2555 ntBASIC5.93□□□□□ -1.46
Trub1Q8C0D0 Olfr384-202ENSMUST00000214228 2576 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Trub1Q8C0D0 AU023762-203ENSMUST00000209897 2179 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Trub1Q8C0D0 Olfr1353-201ENSMUST00000039718 1992 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms