Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Rps13-ps6-201ENSMUST00000120038 428 ntBASIC6.72□□□□□ -1.33
Sox9Q04887 Mup-ps13-201ENSMUST00000120662 545 ntBASIC6.72□□□□□ -1.33
Sox9Q04887 Mup-ps1-201ENSMUST00000120720 544 ntBASIC6.72□□□□□ -1.33
Sox9Q04887 Gm11797-201ENSMUST00000121336 754 ntBASIC6.72□□□□□ -1.33
Sox9Q04887 B230112J18Rik-201ENSMUST00000128473 602 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Sox9Q04887 1700048M11Rik-201ENSMUST00000132861 485 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Sox9Q04887 Gm22312-201ENSMUST00000158005 130 ntBASIC6.72□□□□□ -1.33
Sox9Q04887 Gm23071-201ENSMUST00000158242 115 ntBASIC6.72□□□□□ -1.33
Sox9Q04887 Iltifb-201ENSMUST00000163808 1111 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sox9Q04887 Gm3594-201ENSMUST00000169152 997 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Sox9Q04887 Gm20647-201ENSMUST00000176396 857 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Sox9Q04887 Trav12-2-201ENSMUST00000180972 426 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Sox9Q04887 Rpl9-ps1-202ENSMUST00000182502 576 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Sox9Q04887 Gm27315-201ENSMUST00000183977 154 ntBASIC6.72□□□□□ -1.33
Sox9Q04887 Lockd-204ENSMUST00000184991 243 ntTSL 5 BASIC6.72□□□□□ -1.33
Sox9Q04887 Gm28356-202ENSMUST00000187566 858 ntBASIC6.72□□□□□ -1.33
Sox9Q04887 Gm37380-201ENSMUST00000193752 397 ntBASIC6.72□□□□□ -1.33
Sox9Q04887 D030025E07Rik-204ENSMUST00000198275 653 ntTSL 3 BASIC6.72□□□□□ -1.33
Sox9Q04887 Gm3279-201ENSMUST00000203099 1092 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Sox9Q04887 1700095K22Rik-201ENSMUST00000206808 282 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Sox9Q04887 Gm44681-201ENSMUST00000208447 842 ntBASIC6.72□□□□□ -1.33
Sox9Q04887 Gm38590-201ENSMUST00000209515 970 ntTSL 5 BASIC6.72□□□□□ -1.33
Sox9Q04887 Olfr886-ps1-201ENSMUST00000212395 708 ntBASIC6.72□□□□□ -1.33
Sox9Q04887 Olfr1244-ps1-201ENSMUST00000213226 683 ntBASIC6.72□□□□□ -1.33
Sox9Q04887 Gm5119-201ENSMUST00000215858 634 ntBASIC6.72□□□□□ -1.33
Sox9Q04887 C030006N10Rik-201ENSMUST00000219077 517 ntBASIC6.72□□□□□ -1.33
Sox9Q04887 Gm46436-201ENSMUST00000221851 1294 ntBASIC6.72□□□□□ -1.33
Sox9Q04887 Gm19154-201ENSMUST00000223330 940 ntBASIC6.72□□□□□ -1.33
Sox9Q04887 AC164597.2-201ENSMUST00000226738 603 ntBASIC6.72□□□□□ -1.33
Sox9Q04887 Olfr1323-201ENSMUST00000057071 930 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Sox9Q04887 Magea3-201ENSMUST00000079867 963 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Sox9Q04887 Olfr767-201ENSMUST00000082131 1086 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Sox9Q04887 Gm24035-201ENSMUST00000082867 107 ntBASIC6.72□□□□□ -1.33
Sox9Q04887 Cfap61-206ENSMUST00000133433 3998 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Sox9Q04887 Gm43588-201ENSMUST00000201862 2298 ntBASIC6.72□□□□□ -1.33
Sox9Q04887 Trps1-201ENSMUST00000077935 4436 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sox9Q04887 Ank3-230ENSMUST00000182795 3557 ntTSL 5 BASIC6.72□□□□□ -1.33
Sox9Q04887 Plch1-213ENSMUST00000177143 6010 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Sox9Q04887 Gm3591-201ENSMUST00000164408 1745 ntAPPRIS P5 TSL 5 BASIC6.72□□□□□ -1.33
Sox9Q04887 Zscan4e-201ENSMUST00000166753 1722 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Sox9Q04887 Akap4-202ENSMUST00000115750 3021 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Sox9Q04887 Matr3-205ENSMUST00000186796 1854 ntTSL 5 BASIC6.72□□□□□ -1.33
Sox9Q04887 Gcc2-207ENSMUST00000162041 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sox9Q04887 AC163660.4-201ENSMUST00000224983 2171 ntBASIC6.72□□□□□ -1.33
Sox9Q04887 1810064F22Rik-203ENSMUST00000188595 2307 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Sox9Q04887 Grik2-207ENSMUST00000218823 9427 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sox9Q04887 Jade3-202ENSMUST00000115384 4866 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sox9Q04887 Gm36799-202ENSMUST00000215783 1634 ntTSL 5 BASIC6.72□□□□□ -1.33
Sox9Q04887 Serpinb9f-201ENSMUST00000075515 1912 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sox9Q04887 Olfr401-202ENSMUST00000213754 2227 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Sox9Q04887 Abca8b-201ENSMUST00000020948 7423 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sox9Q04887 Zdhhc9-202ENSMUST00000088935 2815 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Sox9Q04887 Asap1-208ENSMUST00000176014 3435 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Sox9Q04887 Cldn12-202ENSMUST00000115445 3477 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Sox9Q04887 Wdr63-201ENSMUST00000160285 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Sox9Q04887 Gm44215-201ENSMUST00000204910 2711 ntBASIC6.71□□□□□ -1.33
Sox9Q04887 Gm37107-201ENSMUST00000195326 2552 ntBASIC6.71□□□□□ -1.33
Sox9Q04887 Slfn4-203ENSMUST00000215472 1830 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Sox9Q04887 Gm37140-201ENSMUST00000192914 1684 ntBASIC6.71□□□□□ -1.33
Sox9Q04887 Zfand6-202ENSMUST00000178385 1538 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
Sox9Q04887 Gm9972-201ENSMUST00000069051 1533 ntAPPRIS P1 BASIC6.71□□□□□ -1.33
Sox9Q04887 Olfr675-203ENSMUST00000214318 3828 ntTSL 5 BASIC6.71□□□□□ -1.33
Sox9Q04887 Irgm2-203ENSMUST00000209079 3528 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.33
Sox9Q04887 Gm38322-201ENSMUST00000194074 2300 ntBASIC6.71□□□□□ -1.33
Sox9Q04887 Gm2080-201ENSMUST00000211299 1573 ntBASIC6.71□□□□□ -1.34
Sox9Q04887 Serpinb5-202ENSMUST00000112729 2531 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Sox9Q04887 Olfr701-202ENSMUST00000166880 1444 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Sox9Q04887 Gm14403-202ENSMUST00000108947 1209 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Sox9Q04887 Gm13265-201ENSMUST00000118090 421 ntBASIC6.71□□□□□ -1.34
Sox9Q04887 Gm5073-201ENSMUST00000118222 820 ntBASIC6.71□□□□□ -1.34
Sox9Q04887 Gm14610-201ENSMUST00000118358 966 ntBASIC6.71□□□□□ -1.34
Sox9Q04887 Gm13006-201ENSMUST00000118683 214 ntBASIC6.71□□□□□ -1.34
Sox9Q04887 Gm14103-201ENSMUST00000119075 366 ntBASIC6.71□□□□□ -1.34
Sox9Q04887 Gm8051-201ENSMUST00000120464 466 ntBASIC6.71□□□□□ -1.34
Sox9Q04887 9130015L21Rik-201ENSMUST00000140319 606 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Sox9Q04887 Gm14325-202ENSMUST00000150650 310 ntTSL 2 BASIC6.71□□□□□ -1.34
Sox9Q04887 Gm16055-201ENSMUST00000161366 626 ntTSL 2 BASIC6.71□□□□□ -1.34
Sox9Q04887 Gm17268-201ENSMUST00000171515 66 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Sox9Q04887 Vmn1r-ps148-201ENSMUST00000176775 455 ntBASIC6.71□□□□□ -1.34
Sox9Q04887 Gm9529-201ENSMUST00000177598 579 ntBASIC6.71□□□□□ -1.34
Sox9Q04887 Astx6-201ENSMUST00000180281 1150 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Sox9Q04887 Gm27044-201ENSMUST00000183033 796 ntBASIC6.71□□□□□ -1.34
Sox9Q04887 Igkv19-93-201ENSMUST00000183936 344 ntAPPRIS ALT2 BASIC6.71□□□□□ -1.34
Sox9Q04887 Gm27853-201ENSMUST00000184176 250 ntBASIC6.71□□□□□ -1.34
Sox9Q04887 Gm29191-201ENSMUST00000185427 621 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Sox9Q04887 Gm28943-201ENSMUST00000186187 615 ntBASIC6.71□□□□□ -1.34
Sox9Q04887 Gm28736-201ENSMUST00000186257 615 ntBASIC6.71□□□□□ -1.34
Sox9Q04887 Gm29426-202ENSMUST00000186564 536 ntTSL 5 BASIC6.71□□□□□ -1.34
Sox9Q04887 Gm29401-201ENSMUST00000186690 615 ntBASIC6.71□□□□□ -1.34
Sox9Q04887 Gm29178-204ENSMUST00000186784 615 ntBASIC6.71□□□□□ -1.34
Sox9Q04887 Gm28589-201ENSMUST00000186991 615 ntBASIC6.71□□□□□ -1.34
Sox9Q04887 Gm28936-201ENSMUST00000187153 615 ntBASIC6.71□□□□□ -1.34
Sox9Q04887 4930532M18Rik-201ENSMUST00000187189 481 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Sox9Q04887 Gm29121-201ENSMUST00000187611 615 ntBASIC6.71□□□□□ -1.34
Sox9Q04887 Gm28243-201ENSMUST00000187801 615 ntBASIC6.71□□□□□ -1.34
Sox9Q04887 Gm28844-202ENSMUST00000187977 615 ntBASIC6.71□□□□□ -1.34
Sox9Q04887 Gm28486-201ENSMUST00000188443 621 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Sox9Q04887 Gm29058-201ENSMUST00000189510 615 ntBASIC6.71□□□□□ -1.34
Sox9Q04887 Gm29624-201ENSMUST00000190018 615 ntBASIC6.71□□□□□ -1.34
Sox9Q04887 Gm28780-201ENSMUST00000190223 615 ntBASIC6.71□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 71.1 ms