Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 CT010431.1-201ENSMUST00000221249 1080 ntBASIC3.87□□□□□ -1.79
PrkdcP97313 Gramd1b-214ENSMUST00000216821 7445 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
PrkdcP97313 AC158595.1-201ENSMUST00000217989 1435 ntBASIC3.87□□□□□ -1.79
PrkdcP97313 Phlpp2-201ENSMUST00000034175 7839 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PrkdcP97313 P2ry12-204ENSMUST00000199609 2157 ntAPPRIS P1 TSL 3 BASIC3.86□□□□□ -1.79
PrkdcP97313 Btk-201ENSMUST00000033617 2540 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PrkdcP97313 Zfhx3-201ENSMUST00000043896 16433 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PrkdcP97313 Eif2ak4-204ENSMUST00000110870 5116 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PrkdcP97313 Gm14857-201ENSMUST00000117862 3185 ntBASIC3.86□□□□□ -1.79
PrkdcP97313 Gng2-206ENSMUST00000162425 393 ntAPPRIS P1 TSL 3 BASIC3.86□□□□□ -1.79
PrkdcP97313 Dctd-206ENSMUST00000174379 381 ntTSL 3 BASIC3.86□□□□□ -1.79
PrkdcP97313 Obox4-ps26-201ENSMUST00000176368 724 ntBASIC3.86□□□□□ -1.79
PrkdcP97313 AC165260.4-201ENSMUST00000225924 724 ntBASIC3.86□□□□□ -1.79
PrkdcP97313 Gm17728-201ENSMUST00000076982 399 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
PrkdcP97313 Olfr25-202ENSMUST00000212354 1362 ntAPPRIS ALT2 BASIC3.86□□□□□ -1.79
PrkdcP97313 Fgf10-201ENSMUST00000022246 4114 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PrkdcP97313 4933411O13Rik-201ENSMUST00000050665 1464 ntBASIC3.86□□□□□ -1.79
PrkdcP97313 Olfr1504-202ENSMUST00000209192 1514 ntAPPRIS P1 TSL 3 BASIC3.86□□□□□ -1.79
PrkdcP97313 Sp100-212ENSMUST00000153574 1653 ntTSL 5 BASIC3.86□□□□□ -1.79
PrkdcP97313 Gm15950-201ENSMUST00000162902 1973 ntBASIC3.86□□□□□ -1.79
PrkdcP97313 Clec2g-203ENSMUST00000142388 2404 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PrkdcP97313 Gm30570-201ENSMUST00000213553 2651 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PrkdcP97313 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
PrkdcP97313 Ppp1r9a-212ENSMUST00000177456 3975 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
PrkdcP97313 Chd2-203ENSMUST00000169922 9085 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
PrkdcP97313 Diaph1-203ENSMUST00000115629 5416 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
PrkdcP97313 Depdc5-205ENSMUST00000120902 5195 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
PrkdcP97313 Prkacb-204ENSMUST00000106138 3999 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PrkdcP97313 Ankrd55-205ENSMUST00000223871 3209 ntBASIC3.86□□□□□ -1.79
PrkdcP97313 Olfr510-202ENSMUST00000213979 2898 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
PrkdcP97313 Olfr123-203ENSMUST00000216051 2716 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
PrkdcP97313 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PrkdcP97313 Akap11-202ENSMUST00000123853 9364 ntAPPRIS P3 TSL 5 BASIC3.86□□□□□ -1.79
PrkdcP97313 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PrkdcP97313 Sfmbt2-205ENSMUST00000116594 7821 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
PrkdcP97313 Olfr180-203ENSMUST00000206168 1518 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
PrkdcP97313 Dbi-202ENSMUST00000112648 504 ntTSL 2 BASIC3.86□□□□□ -1.79
PrkdcP97313 Gm15238-201ENSMUST00000119938 1296 ntBASIC3.86□□□□□ -1.79
PrkdcP97313 Gm25293-201ENSMUST00000122792 285 ntBASIC3.86□□□□□ -1.79
PrkdcP97313 Gm2182-201ENSMUST00000145243 663 ntBASIC3.86□□□□□ -1.79
PrkdcP97313 Rian-217ENSMUST00000183266 687 ntTSL 3 BASIC3.86□□□□□ -1.79
PrkdcP97313 Mir3620-201ENSMUST00000184710 61 ntBASIC3.86□□□□□ -1.79
PrkdcP97313 Gm43418-201ENSMUST00000201334 428 ntBASIC3.86□□□□□ -1.79
PrkdcP97313 Gm45422-201ENSMUST00000211476 246 ntBASIC3.86□□□□□ -1.79
PrkdcP97313 AC109180.1-201ENSMUST00000218676 398 ntBASIC3.86□□□□□ -1.79
PrkdcP97313 AC133189.2-201ENSMUST00000228527 392 ntBASIC3.86□□□□□ -1.79
PrkdcP97313 Cypt3-201ENSMUST00000056754 666 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
PrkdcP97313 Ankrd11-201ENSMUST00000098333 7995 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
PrkdcP97313 Olfr1338-202ENSMUST00000214922 2947 ntAPPRIS ALT1 TSL 5 BASIC3.86□□□□□ -1.79
PrkdcP97313 Cobl-210ENSMUST00000174874 5451 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
PrkdcP97313 Synrg-208ENSMUST00000183714 3651 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
PrkdcP97313 Gm44043-201ENSMUST00000203426 3253 ntBASIC3.86□□□□□ -1.79
PrkdcP97313 Olfr1420-203ENSMUST00000217281 2998 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
PrkdcP97313 Ptpn3-201ENSMUST00000075637 6369 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
PrkdcP97313 Ncoa6-202ENSMUST00000109669 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
PrkdcP97313 1700091H14Rik-202ENSMUST00000185725 1388 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PrkdcP97313 Vav3-202ENSMUST00000106576 3123 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PrkdcP97313 Gm22493-201ENSMUST00000104494 132 ntBASIC3.86□□□□□ -1.79
PrkdcP97313 Gm13137-201ENSMUST00000118035 345 ntBASIC3.86□□□□□ -1.79
PrkdcP97313 1700108F19Rik-201ENSMUST00000185213 621 ntTSL 3 BASIC3.86□□□□□ -1.79
PrkdcP97313 Gm29000-207ENSMUST00000190152 1160 ntTSL 5 BASIC3.86□□□□□ -1.79
PrkdcP97313 Gm37836-201ENSMUST00000195875 175 ntBASIC3.86□□□□□ -1.79
PrkdcP97313 1700019C18Rik-202ENSMUST00000221688 1047 ntTSL 5 BASIC3.86□□□□□ -1.79
PrkdcP97313 Gm23795-201ENSMUST00000084006 137 ntBASIC3.86□□□□□ -1.79
PrkdcP97313 Pfkfb3-206ENSMUST00000114846 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PrkdcP97313 AC163354.1-204ENSMUST00000222226 2033 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
PrkdcP97313 Prdm16-204ENSMUST00000105636 8426 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
PrkdcP97313 Slc38a2-201ENSMUST00000023099 4626 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PrkdcP97313 Adam34-202ENSMUST00000212185 2335 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PrkdcP97313 Ncf2-202ENSMUST00000186568 3550 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PrkdcP97313 Pigc-202ENSMUST00000111594 3290 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PrkdcP97313 Klhl24-201ENSMUST00000023509 6683 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
PrkdcP97313 Pum2-201ENSMUST00000020915 3587 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
PrkdcP97313 Adam30-201ENSMUST00000050342 3510 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
PrkdcP97313 Gm14391-204ENSMUST00000109058 1854 ntAPPRIS P1 TSL 3 BASIC3.85□□□□□ -1.79
PrkdcP97313 Efcab6-207ENSMUST00000156187 5012 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PrkdcP97313 Olfr1083-ps-201ENSMUST00000117704 943 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
PrkdcP97313 Gm13213-201ENSMUST00000119668 474 ntBASIC3.85□□□□□ -1.79
PrkdcP97313 Gm11844-201ENSMUST00000129207 459 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PrkdcP97313 1700061F12Rik-201ENSMUST00000132414 876 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PrkdcP97313 Gm12405-201ENSMUST00000141120 660 ntTSL 3 BASIC3.85□□□□□ -1.79
PrkdcP97313 9930111H07Rik-201ENSMUST00000187270 821 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PrkdcP97313 Gm44074-201ENSMUST00000204562 337 ntBASIC3.85□□□□□ -1.79
PrkdcP97313 Api5-ps-201ENSMUST00000206607 577 ntBASIC3.85□□□□□ -1.79
PrkdcP97313 Olfr897-ps1-201ENSMUST00000213589 935 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
PrkdcP97313 Olfr424-201ENSMUST00000053941 948 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
PrkdcP97313 Gk-208ENSMUST00000156390 4245 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
PrkdcP97313 Col11a1-201ENSMUST00000092155 7667 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PrkdcP97313 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
PrkdcP97313 Olfr470-203ENSMUST00000220193 3080 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
PrkdcP97313 Olfr705-202ENSMUST00000213721 3001 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
PrkdcP97313 Luzp4-201ENSMUST00000101185 2023 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
PrkdcP97313 Zbbx-204ENSMUST00000107778 2467 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
PrkdcP97313 Cfap57-201ENSMUST00000071972 4020 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
PrkdcP97313 Cntn1-202ENSMUST00000068378 3964 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PrkdcP97313 Kcnj16-201ENSMUST00000106635 3671 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PrkdcP97313 Gm43684-201ENSMUST00000199279 6573 ntBASIC3.85□□□□□ -1.79
PrkdcP97313 Zfp937-201ENSMUST00000073782 2797 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
PrkdcP97313 Mir708-201ENSMUST00000102189 109 ntBASIC3.85□□□□□ -1.79
PrkdcP97313 Gm7657-201ENSMUST00000118851 666 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms