Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Speer4a-201ENSMUST00000079447 2980 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Tpm1P58771 Gm36936-201ENSMUST00000194508 2749 ntBASIC6.37□□□□□ -1.39
Tpm1P58771 4930550C14Rik-203ENSMUST00000215668 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Tpm1P58771 Gm43900-201ENSMUST00000204868 2669 ntBASIC6.37□□□□□ -1.39
Tpm1P58771 Sri-202ENSMUST00000088786 2504 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Tpm1P58771 Sgcd-202ENSMUST00000109220 2450 ntTSL 5 BASIC6.37□□□□□ -1.39
Tpm1P58771 Vmn1r80-206ENSMUST00000228028 6918 ntBASIC6.37□□□□□ -1.39
Tpm1P58771 Gm44255-201ENSMUST00000203456 2053 ntBASIC6.37□□□□□ -1.39
Tpm1P58771 Gucy2f-201ENSMUST00000042530 8122 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Tpm1P58771 Gm15713-201ENSMUST00000155900 1546 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Tpm1P58771 Cd47-202ENSMUST00000114496 867 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Tpm1P58771 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Tpm1P58771 Gm14563-201ENSMUST00000120571 354 ntBASIC6.37□□□□□ -1.39
Tpm1P58771 Gm13998-201ENSMUST00000120952 335 ntBASIC6.37□□□□□ -1.39
Tpm1P58771 Gm12804-201ENSMUST00000121030 999 ntBASIC6.37□□□□□ -1.39
Tpm1P58771 Gm12396-201ENSMUST00000121600 306 ntBASIC6.37□□□□□ -1.39
Tpm1P58771 Gm12239-201ENSMUST00000134285 500 ntTSL 5 BASIC6.37□□□□□ -1.39
Tpm1P58771 Gm16125-201ENSMUST00000159003 339 ntBASIC6.37□□□□□ -1.39
Tpm1P58771 Kcnj13-202ENSMUST00000174179 261 ntTSL 5 BASIC6.37□□□□□ -1.39
Tpm1P58771 Prp2-202ENSMUST00000178961 951 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Tpm1P58771 Scgb1b17-201ENSMUST00000187081 417 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Tpm1P58771 Scgb1b10-201ENSMUST00000187257 417 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Tpm1P58771 Gm28080-201ENSMUST00000188552 722 ntBASIC6.37□□□□□ -1.39
Tpm1P58771 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Tpm1P58771 Scgb1b15-201ENSMUST00000189118 417 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Tpm1P58771 Gm21524-201ENSMUST00000190499 696 ntBASIC6.37□□□□□ -1.39
Tpm1P58771 Gm21715-201ENSMUST00000191056 694 ntBASIC6.37□□□□□ -1.39
Tpm1P58771 4930562F17Rik-201ENSMUST00000195279 960 ntTSL 3 BASIC6.37□□□□□ -1.39
Tpm1P58771 Gm42109-202ENSMUST00000200893 664 ntTSL 3 BASIC6.37□□□□□ -1.39
Tpm1P58771 Gm44730-201ENSMUST00000205902 716 ntTSL 3 BASIC6.37□□□□□ -1.39
Tpm1P58771 Gm44940-201ENSMUST00000206225 1247 ntBASIC6.37□□□□□ -1.39
Tpm1P58771 Olfr1315-ps1-201ENSMUST00000207542 1230 ntAPPRIS P5 TSL 5 BASIC6.37□□□□□ -1.39
Tpm1P58771 Gm44787-202ENSMUST00000208339 1069 ntTSL 5 BASIC6.37□□□□□ -1.39
Tpm1P58771 Gm30313-201ENSMUST00000216806 597 ntTSL 3 BASIC6.37□□□□□ -1.39
Tpm1P58771 AC160138.1-201ENSMUST00000217965 588 ntTSL 3 BASIC6.37□□□□□ -1.39
Tpm1P58771 4930545H06Rik-201ENSMUST00000218225 763 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Tpm1P58771 Gm4489-201ENSMUST00000219576 517 ntTSL 2 BASIC6.37□□□□□ -1.39
Tpm1P58771 AC124601.1-201ENSMUST00000220531 135 ntBASIC6.37□□□□□ -1.39
Tpm1P58771 Gm9267-201ENSMUST00000222831 404 ntBASIC6.37□□□□□ -1.39
Tpm1P58771 AC123665.3-201ENSMUST00000228735 1216 ntBASIC6.37□□□□□ -1.39
Tpm1P58771 Ssmem1-202ENSMUST00000031798 1155 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Tpm1P58771 Olfr313-201ENSMUST00000082220 1074 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Tpm1P58771 n-R5s41-201ENSMUST00000083025 119 ntBASIC6.37□□□□□ -1.39
Tpm1P58771 Olfr441-201ENSMUST00000095954 933 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Tpm1P58771 Depdc1a-203ENSMUST00000120272 3323 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Tpm1P58771 Slco1c1-203ENSMUST00000203140 2771 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
Tpm1P58771 Dst-215ENSMUST00000185269 16340 ntTSL 5 BASIC6.37□□□□□ -1.39
Tpm1P58771 Olfr733-202ENSMUST00000214372 3530 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Tpm1P58771 Zfp280d-201ENSMUST00000098576 4387 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
Tpm1P58771 Ifi206-201ENSMUST00000160565 3047 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Tpm1P58771 Nlgn1-203ENSMUST00000191835 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Tpm1P58771 AC116797.1-201ENSMUST00000223988 3955 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Tpm1P58771 Mbnl3-204ENSMUST00000136404 1632 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
Tpm1P58771 Olfr1386-203ENSMUST00000213674 2457 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Tpm1P58771 P2ry12-201ENSMUST00000050360 2250 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Tpm1P58771 Serpinb6c-202ENSMUST00000172184 1327 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Tpm1P58771 AC160966.1-202ENSMUST00000216860 1318 ntTSL 5 BASIC6.36□□□□□ -1.39
Tpm1P58771 Daw1-202ENSMUST00000065436 1349 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Tpm1P58771 A230057D06Rik-201ENSMUST00000208961 3026 ntTSL 5 BASIC6.36□□□□□ -1.39
Tpm1P58771 Gm25877-201ENSMUST00000104326 129 ntBASIC6.36□□□□□ -1.39
Tpm1P58771 Gm12850-201ENSMUST00000119210 436 ntBASIC6.36□□□□□ -1.39
Tpm1P58771 Gm14115-201ENSMUST00000119242 482 ntBASIC6.36□□□□□ -1.39
Tpm1P58771 Crem-206ENSMUST00000124747 973 ntTSL 2 BASIC6.36□□□□□ -1.39
Tpm1P58771 Gm14640-201ENSMUST00000145800 437 ntTSL 5 BASIC6.36□□□□□ -1.39
Tpm1P58771 Gm13485-201ENSMUST00000146690 659 ntTSL 2 BASIC6.36□□□□□ -1.39
Tpm1P58771 Gm16079-201ENSMUST00000149065 578 ntTSL 3 BASIC6.36□□□□□ -1.39
Tpm1P58771 Mirt2-201ENSMUST00000175179 285 ntBASIC6.36□□□□□ -1.39
Tpm1P58771 Mdrl-201ENSMUST00000180483 1020 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Tpm1P58771 Gm27006-201ENSMUST00000182218 943 ntBASIC6.36□□□□□ -1.39
Tpm1P58771 1110008L16Rik-203ENSMUST00000183654 943 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Tpm1P58771 Gm45870-201ENSMUST00000211269 601 ntBASIC6.36□□□□□ -1.39
Tpm1P58771 Gm7570-201ENSMUST00000215246 698 ntBASIC6.36□□□□□ -1.39
Tpm1P58771 Olfr976-203ENSMUST00000217360 1164 ntAPPRIS ALT2 BASIC6.36□□□□□ -1.39
Tpm1P58771 Gm9292-201ENSMUST00000222008 710 ntBASIC6.36□□□□□ -1.39
Tpm1P58771 AC158511.1-201ENSMUST00000223622 764 ntBASIC6.36□□□□□ -1.39
Tpm1P58771 AC167013.4-201ENSMUST00000226712 317 ntBASIC6.36□□□□□ -1.39
Tpm1P58771 CT009515.1-201ENSMUST00000228127 586 ntBASIC6.36□□□□□ -1.39
Tpm1P58771 AC131033.1-201ENSMUST00000228223 279 ntBASIC6.36□□□□□ -1.39
Tpm1P58771 Vmn1r11-201ENSMUST00000071304 900 ntAPPRIS P2 BASIC6.36□□□□□ -1.39
Tpm1P58771 Olfr1354-201ENSMUST00000075859 1095 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Tpm1P58771 Gm23927-201ENSMUST00000082466 215 ntBASIC6.36□□□□□ -1.39
Tpm1P58771 Cxcr6-202ENSMUST00000216072 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Tpm1P58771 Gng12-201ENSMUST00000043148 4248 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Tpm1P58771 Alg11-201ENSMUST00000072572 4960 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Tpm1P58771 Nxf7-201ENSMUST00000033784 1863 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Tpm1P58771 Kynu-203ENSMUST00000112826 1587 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Tpm1P58771 Vmn1r90-202ENSMUST00000226264 7796 ntAPPRIS P2 BASIC6.35□□□□□ -1.39
Tpm1P58771 A330015K06Rik-202ENSMUST00000195685 2196 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Tpm1P58771 Gm2244-201ENSMUST00000164372 1506 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Tpm1P58771 Prg4-206ENSMUST00000161611 3821 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Tpm1P58771 Il31ra-201ENSMUST00000051756 3680 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Tpm1P58771 Tmem45a2-201ENSMUST00000067173 3073 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
Tpm1P58771 Gm5890-201ENSMUST00000190145 1336 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Tpm1P58771 AC121942.1-201ENSMUST00000224459 2891 ntBASIC6.35□□□□□ -1.39
Tpm1P58771 Gm11561-201ENSMUST00000117429 417 ntBASIC6.35□□□□□ -1.39
Tpm1P58771 Gm14054-201ENSMUST00000120744 704 ntBASIC6.35□□□□□ -1.39
Tpm1P58771 Vmn1r-ps94-201ENSMUST00000122016 458 ntBASIC6.35□□□□□ -1.39
Tpm1P58771 Amy2a1-201ENSMUST00000132353 890 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
Tpm1P58771 Gm24186-201ENSMUST00000157983 127 ntBASIC6.35□□□□□ -1.39
Tpm1P58771 Gm6434-201ENSMUST00000163316 372 ntBASIC6.35□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms