Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Lrrcc1-206ENSMUST00000169079 5638 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
NcanP55066 Prkacb-204ENSMUST00000106138 3999 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
NcanP55066 Amot-202ENSMUST00000112836 6957 ntAPPRIS P2 TSL 5 BASIC6.39□□□□□ -1.39
NcanP55066 Clasp1-210ENSMUST00000188710 10265 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
NcanP55066 Vps8-207ENSMUST00000122235 2521 ntTSL 5 BASIC6.39□□□□□ -1.39
NcanP55066 Vmn2r105-201ENSMUST00000167382 2583 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
NcanP55066 Il1f9-201ENSMUST00000057567 1648 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
NcanP55066 Ston2-201ENSMUST00000052969 9896 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
NcanP55066 Sema3a-202ENSMUST00000095012 4085 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
NcanP55066 Gm37429-201ENSMUST00000193807 1799 ntBASIC6.39□□□□□ -1.39
NcanP55066 Prokr2-201ENSMUST00000049997 4486 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
NcanP55066 Exoc1-201ENSMUST00000049469 3272 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
NcanP55066 Speer5-ps1-203ENSMUST00000217649 7431 ntTSL 5 BASIC6.38□□□□□ -1.39
NcanP55066 Gm10309-201ENSMUST00000095186 2005 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
NcanP55066 Ifi207-201ENSMUST00000042610 3422 ntAPPRIS P2 TSL 5 BASIC6.38□□□□□ -1.39
NcanP55066 Wdr49-201ENSMUST00000193989 2413 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
NcanP55066 Zbtb18-202ENSMUST00000094276 4204 ntAPPRIS ALT1 TSL 2 BASIC6.38□□□□□ -1.39
NcanP55066 Tmem167-203ENSMUST00000161568 8689 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
NcanP55066 Itih2-201ENSMUST00000042290 3100 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
NcanP55066 CT030181.1-201ENSMUST00000089534 3549 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
NcanP55066 Olfr675-204ENSMUST00000215899 3737 ntTSL 5 BASIC6.38□□□□□ -1.39
NcanP55066 Cdh2-202ENSMUST00000115850 3785 ntTSL 5 BASIC6.38□□□□□ -1.39
NcanP55066 Gm3636-201ENSMUST00000100904 519 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
NcanP55066 Ceacam13-202ENSMUST00000108488 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
NcanP55066 Gm3173-201ENSMUST00000112776 519 ntAPPRIS P5 TSL 5 BASIC6.38□□□□□ -1.39
NcanP55066 Gm13137-201ENSMUST00000118035 345 ntBASIC6.38□□□□□ -1.39
NcanP55066 Gm13866-201ENSMUST00000118901 968 ntBASIC6.38□□□□□ -1.39
NcanP55066 Gm5699-201ENSMUST00000152491 723 ntBASIC6.38□□□□□ -1.39
NcanP55066 Gm25227-201ENSMUST00000158204 112 ntBASIC6.38□□□□□ -1.39
NcanP55066 Gm3173-202ENSMUST00000164603 519 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
NcanP55066 Gm3264-201ENSMUST00000166410 519 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
NcanP55066 Gm8108-201ENSMUST00000167397 519 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
NcanP55066 Rab26os-202ENSMUST00000176921 298 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
NcanP55066 Gm3005-201ENSMUST00000178060 444 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
NcanP55066 Gm3488-201ENSMUST00000178220 519 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
NcanP55066 Gm3317-201ENSMUST00000179659 519 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
NcanP55066 Gm29551-201ENSMUST00000190913 698 ntBASIC6.38□□□□□ -1.39
NcanP55066 Gatad1-204ENSMUST00000196304 704 ntTSL 3 BASIC6.38□□□□□ -1.39
NcanP55066 Gm29778-201ENSMUST00000201667 466 ntBASIC6.38□□□□□ -1.39
NcanP55066 Gm44213-201ENSMUST00000204977 703 ntBASIC6.38□□□□□ -1.39
NcanP55066 Gm44840-201ENSMUST00000208983 1168 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
NcanP55066 Dlg2-216ENSMUST00000209170 1057 ntTSL 2 BASIC6.38□□□□□ -1.39
NcanP55066 Gm45494-201ENSMUST00000211167 545 ntTSL 3 BASIC6.38□□□□□ -1.39
NcanP55066 AC159208.1-201ENSMUST00000221403 649 ntBASIC6.38□□□□□ -1.39
NcanP55066 Olfr779-202ENSMUST00000222301 929 ntAPPRIS P5 BASIC6.38□□□□□ -1.39
NcanP55066 Ap3m1-208ENSMUST00000224016 764 ntBASIC6.38□□□□□ -1.39
NcanP55066 Tas2r105-201ENSMUST00000053652 964 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
NcanP55066 Olfr974-201ENSMUST00000062833 1080 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
NcanP55066 Olfr1305-201ENSMUST00000099608 939 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
NcanP55066 Gm13648-201ENSMUST00000138361 1536 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
NcanP55066 Cyp2c66-201ENSMUST00000087234 1630 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
NcanP55066 Il18r1-205ENSMUST00000193793 1652 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
NcanP55066 Vmn1r36-201ENSMUST00000226142 1770 ntAPPRIS ALT2 BASIC6.38□□□□□ -1.39
NcanP55066 Gpalpp1-201ENSMUST00000022585 5389 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
NcanP55066 AC117570.1-201ENSMUST00000214015 1886 ntTSL 5 BASIC6.38□□□□□ -1.39
NcanP55066 A630001G21Rik-202ENSMUST00000159122 2053 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
NcanP55066 Gm18422-202ENSMUST00000203798 2214 ntBASIC6.38□□□□□ -1.39
NcanP55066 Gm15232-201ENSMUST00000146929 2318 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
NcanP55066 Vmn1r32-201ENSMUST00000079584 2833 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
NcanP55066 Rnf145-202ENSMUST00000101327 4214 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
NcanP55066 Hspg2-203ENSMUST00000171332 14176 ntAPPRIS P2 TSL 5 BASIC6.38□□□□□ -1.39
NcanP55066 Trpm7-201ENSMUST00000028843 6985 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
NcanP55066 Emsy-207ENSMUST00000205911 5079 ntTSL 5 BASIC6.37□□□□□ -1.39
NcanP55066 Catsperg2-209ENSMUST00000209126 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
NcanP55066 AC121504.1-201ENSMUST00000221385 2705 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
NcanP55066 AC139758.3-201ENSMUST00000226853 2704 ntBASIC6.37□□□□□ -1.39
NcanP55066 Vmn2r103-201ENSMUST00000172203 2571 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
NcanP55066 Fundc2-201ENSMUST00000033541 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
NcanP55066 Gm43638-201ENSMUST00000201519 2297 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
NcanP55066 Gm9602-201ENSMUST00000163325 2062 ntAPPRIS P5 TSL 1 (best) BASIC6.37□□□□□ -1.39
NcanP55066 Gm8356-201ENSMUST00000163636 2062 ntAPPRIS P5 TSL 5 BASIC6.37□□□□□ -1.39
NcanP55066 Gm44255-201ENSMUST00000203456 2053 ntBASIC6.37□□□□□ -1.39
NcanP55066 Sp110-201ENSMUST00000093508 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
NcanP55066 Phkb-201ENSMUST00000053771 5351 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
NcanP55066 Gm45112-201ENSMUST00000208576 5125 ntBASIC6.37□□□□□ -1.39
NcanP55066 Gm8750-201ENSMUST00000173278 1537 ntBASIC6.37□□□□□ -1.39
NcanP55066 Ms4a13-202ENSMUST00000188464 1301 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
NcanP55066 Ear-ps2-201ENSMUST00000100689 466 ntBASIC6.37□□□□□ -1.39
NcanP55066 Gm23879-201ENSMUST00000116874 126 ntBASIC6.37□□□□□ -1.39
NcanP55066 Gm11498-201ENSMUST00000120660 949 ntBASIC6.37□□□□□ -1.39
NcanP55066 Gm13259-201ENSMUST00000120792 456 ntBASIC6.37□□□□□ -1.39
NcanP55066 Gm11184-201ENSMUST00000126437 268 ntTSL 3 BASIC6.37□□□□□ -1.39
NcanP55066 Vmn1r60-201ENSMUST00000173782 1007 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
NcanP55066 Gm20523-201ENSMUST00000174340 1124 ntBASIC6.37□□□□□ -1.39
NcanP55066 Gm4831-201ENSMUST00000174626 594 ntBASIC6.37□□□□□ -1.39
NcanP55066 Gm32051-201ENSMUST00000196818 709 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
NcanP55066 Gm9710-201ENSMUST00000198053 499 ntBASIC6.37□□□□□ -1.39
NcanP55066 Gm17775-201ENSMUST00000198542 258 ntBASIC6.37□□□□□ -1.39
NcanP55066 Gm32754-201ENSMUST00000199442 257 ntTSL 5 BASIC6.37□□□□□ -1.39
NcanP55066 Gm32158-201ENSMUST00000200135 404 ntBASIC6.37□□□□□ -1.39
NcanP55066 Gm43698-202ENSMUST00000202864 555 ntTSL 3 BASIC6.37□□□□□ -1.39
NcanP55066 Gm2607-201ENSMUST00000212389 627 ntBASIC6.37□□□□□ -1.39
NcanP55066 AC121599.1-201ENSMUST00000224276 449 ntBASIC6.37□□□□□ -1.39
NcanP55066 Anxa13-202ENSMUST00000227274 1201 ntBASIC6.37□□□□□ -1.39
NcanP55066 AC116724.1-201ENSMUST00000227900 972 ntBASIC6.37□□□□□ -1.39
NcanP55066 2310061N02Rik-201ENSMUST00000050882 794 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
NcanP55066 Rpl38-201ENSMUST00000077915 364 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
NcanP55066 Wfdc9-201ENSMUST00000099095 252 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
NcanP55066 Gm20750-201ENSMUST00000194274 3515 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
NcanP55066 Sgms2-201ENSMUST00000090246 5801 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 110.2 ms