Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 9830144P21Rik-202ENSMUST00000127525 3362 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Sox3P53784 Olfr406-202ENSMUST00000214303 2842 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Sox3P53784 Olfr308-202ENSMUST00000214977 4991 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Sox3P53784 Kcnma1-202ENSMUST00000074983 3974 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Sox3P53784 Olfr1389-203ENSMUST00000217595 3549 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Sox3P53784 5330409N07Rik-201ENSMUST00000222069 3518 ntBASIC5.72□□□□□ -1.49
Sox3P53784 Olfr532-203ENSMUST00000213801 4232 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Sox3P53784 Scp2-ps2-203ENSMUST00000216438 1370 ntBASIC5.72□□□□□ -1.49
Sox3P53784 Trmt10a-201ENSMUST00000040321 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Sox3P53784 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Sox3P53784 Fpr3-202ENSMUST00000115565 1220 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Sox3P53784 Gm15016-201ENSMUST00000117300 720 ntBASIC5.72□□□□□ -1.49
Sox3P53784 Gm16205-201ENSMUST00000117720 1027 ntBASIC5.72□□□□□ -1.49
Sox3P53784 Gm15531-201ENSMUST00000118062 252 ntBASIC5.72□□□□□ -1.49
Sox3P53784 Fyttd1-202ENSMUST00000120345 648 ntTSL 5 BASIC5.72□□□□□ -1.49
Sox3P53784 Gm12936-201ENSMUST00000121439 301 ntBASIC5.72□□□□□ -1.49
Sox3P53784 Gm26312-201ENSMUST00000157769 165 ntBASIC5.72□□□□□ -1.49
Sox3P53784 Gm26167-201ENSMUST00000158423 253 ntBASIC5.72□□□□□ -1.49
Sox3P53784 Gm8159-201ENSMUST00000163738 997 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Sox3P53784 Tmem258-204ENSMUST00000166412 447 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Sox3P53784 Olfr102-201ENSMUST00000169373 1027 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Sox3P53784 Gm8297-201ENSMUST00000171636 997 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Sox3P53784 Gm18833-201ENSMUST00000173218 862 ntBASIC5.72□□□□□ -1.49
Sox3P53784 Gm26653-201ENSMUST00000181537 1214 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Sox3P53784 B230110C06Rik-202ENSMUST00000181936 938 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Sox3P53784 Gm27240-201ENSMUST00000183616 677 ntTSL 3 BASIC5.72□□□□□ -1.49
Sox3P53784 Gm10603-203ENSMUST00000184875 508 ntTSL 3 BASIC5.72□□□□□ -1.49
Sox3P53784 4930556G22Rik-201ENSMUST00000185689 741 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Sox3P53784 Gm37681-201ENSMUST00000193880 727 ntBASIC5.72□□□□□ -1.49
Sox3P53784 Gm8920-201ENSMUST00000196153 924 ntBASIC5.72□□□□□ -1.49
Sox3P53784 Gm31887-201ENSMUST00000197661 501 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Sox3P53784 Gm45479-201ENSMUST00000211613 802 ntTSL 3 BASIC5.72□□□□□ -1.49
Sox3P53784 Gm35041-201ENSMUST00000219581 602 ntTSL 3 BASIC5.72□□□□□ -1.49
Sox3P53784 Rpl29-ps2-202ENSMUST00000220540 1165 ntTSL 5 BASIC5.72□□□□□ -1.49
Sox3P53784 Rpl29-ps2-203ENSMUST00000222043 1036 ntTSL 5 BASIC5.72□□□□□ -1.49
Sox3P53784 Gm10037-204ENSMUST00000222626 692 ntAPPRIS ALT2 TSL 3 BASIC5.72□□□□□ -1.49
Sox3P53784 Magea4-201ENSMUST00000048675 948 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Sox3P53784 Fpr3-201ENSMUST00000054871 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Sox3P53784 Gm1604b-201ENSMUST00000089120 357 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Sox3P53784 Akap11-202ENSMUST00000123853 9364 ntAPPRIS P3 TSL 5 BASIC5.72□□□□□ -1.49
Sox3P53784 Gm29198-201ENSMUST00000190102 1512 ntTSL 5 BASIC5.72□□□□□ -1.49
Sox3P53784 Gm15354-201ENSMUST00000132019 1772 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Sox3P53784 Gm45520-201ENSMUST00000210109 2031 ntBASIC5.72□□□□□ -1.49
Sox3P53784 Cep57l1-204ENSMUST00000186239 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Sox3P53784 Tom1l1-204ENSMUST00000107869 1826 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Sox3P53784 Gm31218-202ENSMUST00000221428 1823 ntTSL 5 BASIC5.71□□□□□ -1.49
Sox3P53784 Olfr204-202ENSMUST00000216261 5371 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.49
Sox3P53784 Gm37690-202ENSMUST00000192684 1497 ntTSL 5 BASIC5.71□□□□□ -1.49
Sox3P53784 Gm4924-203ENSMUST00000210381 3330 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.49
Sox3P53784 Serpina9-201ENSMUST00000058464 3571 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Sox3P53784 Nxf7-202ENSMUST00000113163 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Sox3P53784 Baz2b-202ENSMUST00000112550 7895 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Sox3P53784 B830042I05Rik-201ENSMUST00000208333 1620 ntTSL 5 BASIC5.71□□□□□ -1.5
Sox3P53784 Olfr527-203ENSMUST00000214858 3362 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Sox3P53784 Olfr874-202ENSMUST00000216982 2632 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Sox3P53784 Vmn1r27-203ENSMUST00000228530 3115 ntAPPRIS P2 BASIC5.71□□□□□ -1.5
Sox3P53784 Lilra6-201ENSMUST00000038176 2103 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Sox3P53784 Gm15169-201ENSMUST00000126095 2753 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Sox3P53784 Psg16-202ENSMUST00000118367 2282 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
Sox3P53784 Taf7l-202ENSMUST00000113223 1155 ntTSL 5 BASIC5.71□□□□□ -1.5
Sox3P53784 Gm12303-201ENSMUST00000119506 673 ntBASIC5.71□□□□□ -1.5
Sox3P53784 Gm15120-201ENSMUST00000120602 301 ntBASIC5.71□□□□□ -1.5
Sox3P53784 Gm12685-201ENSMUST00000121702 214 ntBASIC5.71□□□□□ -1.5
Sox3P53784 Gm15017-201ENSMUST00000141989 632 ntTSL 5 BASIC5.71□□□□□ -1.5
Sox3P53784 Gm24236-201ENSMUST00000157794 134 ntBASIC5.71□□□□□ -1.5
Sox3P53784 Mir3080-201ENSMUST00000175010 79 ntBASIC5.71□□□□□ -1.5
Sox3P53784 Gm28493-201ENSMUST00000188427 604 ntTSL 5 BASIC5.71□□□□□ -1.5
Sox3P53784 2610509F24Rik-201ENSMUST00000193035 838 ntBASIC5.71□□□□□ -1.5
Sox3P53784 Gm37784-201ENSMUST00000193233 189 ntBASIC5.71□□□□□ -1.5
Sox3P53784 Gm6119-201ENSMUST00000193443 1206 ntBASIC5.71□□□□□ -1.5
Sox3P53784 Gm18290-201ENSMUST00000202900 844 ntBASIC5.71□□□□□ -1.5
Sox3P53784 Gm2011-203ENSMUST00000203750 435 ntBASIC5.71□□□□□ -1.5
Sox3P53784 Gm45156-201ENSMUST00000207255 439 ntBASIC5.71□□□□□ -1.5
Sox3P53784 Gm4032-201ENSMUST00000210886 487 ntBASIC5.71□□□□□ -1.5
Sox3P53784 AC164567.4-201ENSMUST00000219708 483 ntBASIC5.71□□□□□ -1.5
Sox3P53784 AC161884.2-201ENSMUST00000224513 227 ntBASIC5.71□□□□□ -1.5
Sox3P53784 AC154556.1-201ENSMUST00000224587 885 ntBASIC5.71□□□□□ -1.5
Sox3P53784 AC154755.1-201ENSMUST00000225244 537 ntBASIC5.71□□□□□ -1.5
Sox3P53784 Spink14-201ENSMUST00000060328 566 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Sox3P53784 n-R5s204-201ENSMUST00000082972 119 ntBASIC5.71□□□□□ -1.5
Sox3P53784 Mir143-201ENSMUST00000083511 63 ntBASIC5.71□□□□□ -1.5
Sox3P53784 Olfr947-ps1-203ENSMUST00000215471 2177 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Sox3P53784 Ceacam2-202ENSMUST00000064862 3087 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Sox3P53784 D330045A20Rik-202ENSMUST00000113030 3736 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
Sox3P53784 4930568G15Rik-201ENSMUST00000193317 3218 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Sox3P53784 Gm11885-201ENSMUST00000118473 1428 ntBASIC5.71□□□□□ -1.5
Sox3P53784 Gabra6-203ENSMUST00000155218 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Sox3P53784 Kcnrg-202ENSMUST00000225582 1821 ntAPPRIS ALT2 BASIC5.71□□□□□ -1.5
Sox3P53784 Klrk1-205ENSMUST00000168919 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Sox3P53784 Vmn1r208-202ENSMUST00000227136 3156 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Sox3P53784 Olfr553-202ENSMUST00000216776 3972 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Sox3P53784 Gm37725-201ENSMUST00000193965 2125 ntBASIC5.71□□□□□ -1.5
Sox3P53784 Gm43637-201ENSMUST00000202206 2926 ntBASIC5.71□□□□□ -1.5
Sox3P53784 4930563J15Rik-201ENSMUST00000218306 3468 ntBASIC5.71□□□□□ -1.5
Sox3P53784 Fam26d-202ENSMUST00000218239 3075 ntBASIC5.71□□□□□ -1.5
Sox3P53784 Cnga1-204ENSMUST00000169997 2251 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Sox3P53784 Olfr39-202ENSMUST00000212983 2028 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
Sox3P53784 Ifi205-201ENSMUST00000059226 1613 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Sox3P53784 Gm5427-201ENSMUST00000217680 2591 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Sox3P53784 Creb5-212ENSMUST00000205120 7482 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms