Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Iqch-204ENSMUST00000163982 3375 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
HttP42859 Map3k7-203ENSMUST00000108183 5416 ntTSL 5 BASIC5.93□□□□□ -1.46
HttP42859 Mbd4-202ENSMUST00000122816 2415 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HttP42859 Pias1-202ENSMUST00000214830 2492 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HttP42859 Usp17la-201ENSMUST00000067695 2656 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HttP42859 Olfr537-ps1-202ENSMUST00000210949 2821 ntAPPRIS P1 TSL 3 BASIC5.93□□□□□ -1.46
HttP42859 Sema6a-201ENSMUST00000019791 6856 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HttP42859 Pkd1l2-201ENSMUST00000098375 7386 ntAPPRIS P2 TSL 5 BASIC5.93□□□□□ -1.46
HttP42859 AC122382.2-201ENSMUST00000225128 3602 ntBASIC5.93□□□□□ -1.46
HttP42859 Olfr800-201ENSMUST00000104903 940 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
HttP42859 Gm12427-201ENSMUST00000117719 302 ntBASIC5.93□□□□□ -1.46
HttP42859 Gm11633-201ENSMUST00000118176 444 ntBASIC5.93□□□□□ -1.46
HttP42859 Gm29650-201ENSMUST00000188485 742 ntBASIC5.93□□□□□ -1.46
HttP42859 Fbxw27-201ENSMUST00000197125 810 ntAPPRIS P2 TSL 3 BASIC5.93□□□□□ -1.46
HttP42859 Gm6719-201ENSMUST00000202067 335 ntBASIC5.93□□□□□ -1.46
HttP42859 AC125539.2-202ENSMUST00000227983 587 ntBASIC5.93□□□□□ -1.46
HttP42859 AC125539.2-201ENSMUST00000228339 753 ntBASIC5.93□□□□□ -1.46
HttP42859 Olfr424-201ENSMUST00000053941 948 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
HttP42859 Cavin4-201ENSMUST00000030033 2054 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HttP42859 Mrgprb2-201ENSMUST00000052730 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HttP42859 Zfp426-203ENSMUST00000163348 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
HttP42859 Rimbp2-205ENSMUST00000199537 6966 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
HttP42859 Wdr66-206ENSMUST00000163092 4009 ntTSL 5 BASIC5.93□□□□□ -1.46
HttP42859 1110002E22Rik-201ENSMUST00000163080 9741 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
HttP42859 Gm6902-201ENSMUST00000179072 1335 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HttP42859 Trav6n-6-201ENSMUST00000103613 287 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
HttP42859 Crls1-204ENSMUST00000124836 1267 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HttP42859 Gm8374-201ENSMUST00000163826 672 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
HttP42859 Kcnmb2-206ENSMUST00000194796 338 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HttP42859 Iglc3-201ENSMUST00000200235 452 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
HttP42859 Gm43629-201ENSMUST00000201782 704 ntBASIC5.93□□□□□ -1.46
HttP42859 BC028528-201ENSMUST00000036360 752 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
HttP42859 Gm5458-201ENSMUST00000096121 997 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
HttP42859 Ankrd11-202ENSMUST00000098334 8455 ntAPPRIS P2 TSL 5 BASIC5.93□□□□□ -1.46
HttP42859 Anln-201ENSMUST00000040912 4605 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HttP42859 Wdr66-207ENSMUST00000170536 3679 ntTSL 5 BASIC5.93□□□□□ -1.46
HttP42859 Olfr596-202ENSMUST00000214577 3392 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
HttP42859 Add3-203ENSMUST00000111741 4520 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
HttP42859 Zfp473-203ENSMUST00000120074 3624 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
HttP42859 Gm35028-201ENSMUST00000215400 2587 ntTSL 5 BASIC5.93□□□□□ -1.46
HttP42859 Dmxl2-201ENSMUST00000118163 10614 ntAPPRIS P2 TSL 5 BASIC5.93□□□□□ -1.46
HttP42859 Phactr4-202ENSMUST00000084249 2349 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
HttP42859 Vmn1r-ps112-201ENSMUST00000117475 544 ntBASIC5.92□□□□□ -1.46
HttP42859 Cabyr-203ENSMUST00000119108 818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
HttP42859 n-R5s174-201ENSMUST00000122638 121 ntBASIC5.92□□□□□ -1.46
HttP42859 Gm26554-201ENSMUST00000180801 845 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HttP42859 Gm45008-201ENSMUST00000206420 493 ntBASIC5.92□□□□□ -1.46
HttP42859 AC112142.1-206ENSMUST00000228136 982 ntBASIC5.92□□□□□ -1.46
HttP42859 AC118250.1-201ENSMUST00000228569 875 ntBASIC5.92□□□□□ -1.46
HttP42859 Klhl23-201ENSMUST00000053087 4617 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HttP42859 Maml2-201ENSMUST00000034401 2098 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HttP42859 Olfr55-204ENSMUST00000216633 4758 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
HttP42859 4933427D14Rik-202ENSMUST00000108506 4732 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HttP42859 Olfr311-203ENSMUST00000216473 2961 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
HttP42859 Eif2ak4-202ENSMUST00000102527 4906 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HttP42859 Nhsl1-202ENSMUST00000100054 6795 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
HttP42859 Ttc28-206ENSMUST00000156290 10688 ntAPPRIS P2 TSL 5 BASIC5.92□□□□□ -1.46
HttP42859 Olfr916-202ENSMUST00000213714 1380 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
HttP42859 C1d-201ENSMUST00000000594 2981 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HttP42859 Pln-206ENSMUST00000220197 1854 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
HttP42859 Gm12405-201ENSMUST00000141120 660 ntTSL 3 BASIC5.92□□□□□ -1.46
HttP42859 Crem-224ENSMUST00000147138 436 ntTSL 5 BASIC5.92□□□□□ -1.46
HttP42859 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
HttP42859 Ighv8-5-201ENSMUST00000194257 358 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
HttP42859 Gm37836-201ENSMUST00000195875 175 ntBASIC5.92□□□□□ -1.46
HttP42859 Gm45422-201ENSMUST00000211476 246 ntBASIC5.92□□□□□ -1.46
HttP42859 Olfr897-ps1-201ENSMUST00000213589 935 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
HttP42859 AC159809.1-201ENSMUST00000216235 520 ntTSL 5 BASIC5.92□□□□□ -1.46
HttP42859 Gm6362-201ENSMUST00000217686 836 ntBASIC5.92□□□□□ -1.46
HttP42859 Olfr904-201ENSMUST00000058153 933 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
HttP42859 Gm3453-201ENSMUST00000170686 1756 ntAPPRIS P5 TSL 5 BASIC5.92□□□□□ -1.46
HttP42859 Nrp2-205ENSMUST00000114155 6534 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HttP42859 Olfr744-202ENSMUST00000213668 2583 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
HttP42859 Vmn2r-ps54-202ENSMUST00000150147 2952 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HttP42859 Vmn2r34-201ENSMUST00000173459 3616 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
HttP42859 Slc6a5-203ENSMUST00000207753 6966 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HttP42859 Gm37589-201ENSMUST00000193609 3994 ntBASIC5.92□□□□□ -1.46
HttP42859 Gm37120-201ENSMUST00000193350 5959 ntBASIC5.92□□□□□ -1.46
HttP42859 Gla-201ENSMUST00000033621 3172 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HttP42859 Gm44440-201ENSMUST00000203139 2373 ntBASIC5.92□□□□□ -1.46
HttP42859 Gm14620-201ENSMUST00000120656 383 ntBASIC5.92□□□□□ -1.46
HttP42859 Rab26os-202ENSMUST00000176921 298 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HttP42859 Gm6526-202ENSMUST00000179860 591 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
HttP42859 Gm28615-201ENSMUST00000187527 482 ntBASIC5.92□□□□□ -1.46
HttP42859 Gm44108-201ENSMUST00000203525 422 ntBASIC5.92□□□□□ -1.46
HttP42859 Dsg1a-201ENSMUST00000077146 5686 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HttP42859 Olfr516-202ENSMUST00000216092 1493 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
HttP42859 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
HttP42859 Zfp874a-202ENSMUST00000075255 3238 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HttP42859 Lrrtm4-203ENSMUST00000126399 3050 ntAPPRIS ALT1 TSL 5 BASIC5.91□□□□□ -1.46
HttP42859 Gm42885-201ENSMUST00000200763 4214 ntBASIC5.91□□□□□ -1.46
HttP42859 AY702103-202ENSMUST00000180996 5876 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HttP42859 Olfr213-201ENSMUST00000121958 984 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
HttP42859 Gm2182-201ENSMUST00000145243 663 ntBASIC5.91□□□□□ -1.46
HttP42859 Gm26069-201ENSMUST00000157497 277 ntBASIC5.91□□□□□ -1.46
HttP42859 Mir7658-201ENSMUST00000184043 57 ntBASIC5.91□□□□□ -1.46
HttP42859 Olfr540-ps1-201ENSMUST00000210499 612 ntBASIC5.91□□□□□ -1.46
HttP42859 Olfr1065-202ENSMUST00000216162 2148 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
HttP42859 Smr3a-201ENSMUST00000031211 635 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
HttP42859 Gm4861-201ENSMUST00000068546 957 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms