Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Gm8237-202ENSMUST00000178594 447 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Usp4P35123 9430002A10Rik-202ENSMUST00000185395 475 ntBASIC6.71□□□□□ -1.34
Usp4P35123 Mhrt-202ENSMUST00000185798 447 ntTSL 3 BASIC6.71□□□□□ -1.34
Usp4P35123 Nanog-ps2-201ENSMUST00000190988 529 ntBASIC6.71□□□□□ -1.34
Usp4P35123 Gm37189-201ENSMUST00000192131 298 ntBASIC6.71□□□□□ -1.34
Usp4P35123 Gm43120-201ENSMUST00000196228 667 ntTSL 3 BASIC6.71□□□□□ -1.34
Usp4P35123 D030025E07Rik-204ENSMUST00000198275 653 ntTSL 3 BASIC6.71□□□□□ -1.34
Usp4P35123 Gm7452-201ENSMUST00000200764 788 ntBASIC6.71□□□□□ -1.34
Usp4P35123 4930480K02Rik-201ENSMUST00000203679 1054 ntBASIC6.71□□□□□ -1.34
Usp4P35123 Gm44411-201ENSMUST00000204172 349 ntBASIC6.71□□□□□ -1.34
Usp4P35123 Bsph1-202ENSMUST00000204715 707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Usp4P35123 Gm45008-201ENSMUST00000206420 493 ntBASIC6.71□□□□□ -1.34
Usp4P35123 Gm19182-201ENSMUST00000207139 577 ntBASIC6.71□□□□□ -1.34
Usp4P35123 5430437J10Rik-201ENSMUST00000211750 1234 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Usp4P35123 5430402P08Rik-201ENSMUST00000211799 1143 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Usp4P35123 Gm39463-201ENSMUST00000214575 735 ntTSL 3 BASIC6.71□□□□□ -1.34
Usp4P35123 4930540M03Rik-201ENSMUST00000216952 437 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Usp4P35123 Ctla2b-201ENSMUST00000021884 842 ntAPPRIS P4 TSL 1 (best) BASIC6.71□□□□□ -1.34
Usp4P35123 Gm3678-201ENSMUST00000218888 492 ntBASIC6.71□□□□□ -1.34
Usp4P35123 Gm38560-201ENSMUST00000220169 646 ntTSL 3 BASIC6.71□□□□□ -1.34
Usp4P35123 AC122840.3-201ENSMUST00000221474 486 ntTSL 5 BASIC6.71□□□□□ -1.34
Usp4P35123 Gm40653-202ENSMUST00000222122 1155 ntTSL 5 BASIC6.71□□□□□ -1.34
Usp4P35123 CT030645.3-201ENSMUST00000225483 1022 ntBASIC6.71□□□□□ -1.34
Usp4P35123 1700102P08Rik-201ENSMUST00000035234 1101 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Usp4P35123 Olfr177-201ENSMUST00000072853 930 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Usp4P35123 Olfr376-201ENSMUST00000078952 1210 ntAPPRIS ALT2 TSL 2 BASIC6.71□□□□□ -1.34
Usp4P35123 Platr26-201ENSMUST00000079720 641 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Usp4P35123 Olfr310-201ENSMUST00000081918 1082 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Usp4P35123 AC113031.7-201ENSMUST00000228609 1928 ntBASIC6.71□□□□□ -1.34
Usp4P35123 Clca3b-201ENSMUST00000159989 3361 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Usp4P35123 Gm9239-201ENSMUST00000186942 2557 ntBASIC6.71□□□□□ -1.34
Usp4P35123 Synj2bp-203ENSMUST00000163402 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Usp4P35123 Gm3149-202ENSMUST00000171810 1759 ntAPPRIS P5 TSL 5 BASIC6.71□□□□□ -1.34
Usp4P35123 Platr23-201ENSMUST00000180797 2439 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Usp4P35123 Ppp1r3b-201ENSMUST00000070481 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Usp4P35123 Gm26544-201ENSMUST00000181404 2763 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Usp4P35123 Vmn1r181-204ENSMUST00000227637 4587 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Usp4P35123 Gm11590-201ENSMUST00000118999 1455 ntBASIC6.71□□□□□ -1.34
Usp4P35123 AC154841.1-201ENSMUST00000227263 1479 ntBASIC6.71□□□□□ -1.34
Usp4P35123 Hsf3-205ENSMUST00000179832 1972 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Usp4P35123 Zfp811-202ENSMUST00000200914 3458 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Usp4P35123 4933405O20Rik-201ENSMUST00000119710 1341 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Usp4P35123 Gm34004-201ENSMUST00000215460 2837 ntTSL 5 BASIC6.71□□□□□ -1.34
Usp4P35123 Efcab14-201ENSMUST00000074425 4300 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Usp4P35123 Cx3cr1-202ENSMUST00000177637 3156 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Usp4P35123 D330045A20Rik-202ENSMUST00000113030 3736 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
Usp4P35123 Ppargc1a-203ENSMUST00000132734 6464 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Usp4P35123 Mcmdc2-205ENSMUST00000171802 2553 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Usp4P35123 Olfr167-202ENSMUST00000214315 7435 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Usp4P35123 Speer5-ps1-203ENSMUST00000217649 7431 ntTSL 5 BASIC6.7□□□□□ -1.34
Usp4P35123 Vmn1r220-204ENSMUST00000227950 6238 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Usp4P35123 Vmn1r201-202ENSMUST00000226330 4770 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Usp4P35123 Gm18594-201ENSMUST00000175733 1403 ntBASIC6.7□□□□□ -1.34
Usp4P35123 Gm37289-201ENSMUST00000195409 1402 ntBASIC6.7□□□□□ -1.34
Usp4P35123 Gm26603-201ENSMUST00000181380 2861 ntTSL 5 BASIC6.7□□□□□ -1.34
Usp4P35123 Gm6871-202ENSMUST00000110214 1638 ntAPPRIS P5 TSL 5 BASIC6.7□□□□□ -1.34
Usp4P35123 C920009B18Rik-202ENSMUST00000181223 4535 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Usp4P35123 Gm10840-201ENSMUST00000100326 309 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Usp4P35123 Gm14116-201ENSMUST00000117733 805 ntBASIC6.7□□□□□ -1.34
Usp4P35123 Gm15216-201ENSMUST00000118058 277 ntBASIC6.7□□□□□ -1.34
Usp4P35123 Gm12573-201ENSMUST00000118158 286 ntBASIC6.7□□□□□ -1.34
Usp4P35123 Gm12937-201ENSMUST00000118333 448 ntBASIC6.7□□□□□ -1.34
Usp4P35123 Mgst1-204ENSMUST00000120302 559 ntAPPRIS P1 TSL 3 BASIC6.7□□□□□ -1.34
Usp4P35123 Gm14741-201ENSMUST00000120777 1009 ntBASIC6.7□□□□□ -1.34
Usp4P35123 Gm12451-201ENSMUST00000121636 633 ntBASIC6.7□□□□□ -1.34
Usp4P35123 Rps19-ps14-201ENSMUST00000121832 269 ntBASIC6.7□□□□□ -1.34
Usp4P35123 Gm12540-201ENSMUST00000121938 319 ntBASIC6.7□□□□□ -1.34
Usp4P35123 Gm22311-201ENSMUST00000158006 110 ntBASIC6.7□□□□□ -1.34
Usp4P35123 Gm24773-201ENSMUST00000158513 99 ntBASIC6.7□□□□□ -1.34
Usp4P35123 Gm9890-201ENSMUST00000171867 537 ntBASIC6.7□□□□□ -1.34
Usp4P35123 Gm20454-201ENSMUST00000172713 221 ntBASIC6.7□□□□□ -1.34
Usp4P35123 Gm22990-201ENSMUST00000175427 89 ntBASIC6.7□□□□□ -1.34
Usp4P35123 Vmn1r-ps148-201ENSMUST00000176775 455 ntBASIC6.7□□□□□ -1.34
Usp4P35123 Tppp2-202ENSMUST00000177625 627 ntAPPRIS P1 TSL 3 BASIC6.7□□□□□ -1.34
Usp4P35123 Gm5930-202ENSMUST00000178002 489 ntTSL 5 BASIC6.7□□□□□ -1.34
Usp4P35123 Gm9658-201ENSMUST00000182757 1012 ntBASIC6.7□□□□□ -1.34
Usp4P35123 Mir6348-201ENSMUST00000183804 120 ntBASIC6.7□□□□□ -1.34
Usp4P35123 Ms4a12-201ENSMUST00000186228 792 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Usp4P35123 Gm21294-201ENSMUST00000186443 934 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Usp4P35123 Gm29051-201ENSMUST00000190184 369 ntTSL 5 BASIC6.7□□□□□ -1.34
Usp4P35123 Gm37103-201ENSMUST00000191830 115 ntBASIC6.7□□□□□ -1.34
Usp4P35123 Gm43245-201ENSMUST00000197603 468 ntBASIC6.7□□□□□ -1.34
Usp4P35123 Trav13n-1-201ENSMUST00000198359 331 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Usp4P35123 Olfr1542-ps1-201ENSMUST00000204175 752 ntBASIC6.7□□□□□ -1.34
Usp4P35123 Gm6070-201ENSMUST00000207275 419 ntBASIC6.7□□□□□ -1.34
Usp4P35123 Dynlrb2-202ENSMUST00000213007 527 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Usp4P35123 CT573422.1-201ENSMUST00000216655 405 ntBASIC6.7□□□□□ -1.34
Usp4P35123 Gm18040-201ENSMUST00000217922 827 ntBASIC6.7□□□□□ -1.34
Usp4P35123 Gm5176-201ENSMUST00000218244 1227 ntBASIC6.7□□□□□ -1.34
Usp4P35123 AC117656.3-205ENSMUST00000224606 1205 ntBASIC6.7□□□□□ -1.34
Usp4P35123 AC161252.2-201ENSMUST00000224978 374 ntBASIC6.7□□□□□ -1.34
Usp4P35123 AC125064.1-201ENSMUST00000225801 295 ntBASIC6.7□□□□□ -1.34
Usp4P35123 Vmn1r74-201ENSMUST00000050416 915 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Usp4P35123 Tas2r119-201ENSMUST00000057633 1006 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Usp4P35123 Sprr2b-201ENSMUST00000061038 784 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Usp4P35123 Olfr135-201ENSMUST00000076245 1079 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Usp4P35123 Olfr1104-201ENSMUST00000099869 933 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
Usp4P35123 Tgif1-211ENSMUST00000186358 1455 ntTSL 3 BASIC6.7□□□□□ -1.34
Usp4P35123 Gm10826-201ENSMUST00000215366 3304 ntBASIC6.7□□□□□ -1.34
Usp4P35123 Hus1-201ENSMUST00000020683 4640 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms