Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm37776-201ENSMUST00000193471 2497 ntBASIC4.71□□□□□ -1.66
Sdc1P18828 AC144772.1-201ENSMUST00000226372 2398 ntBASIC4.71□□□□□ -1.66
Sdc1P18828 Gm44695-201ENSMUST00000205567 1631 ntBASIC4.71□□□□□ -1.66
Sdc1P18828 Gm884-201ENSMUST00000059279 10977 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Sdc1P18828 Olfr720-203ENSMUST00000216079 4692 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Sdc1P18828 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC4.7□□□□□ -1.66
Sdc1P18828 BC065397-203ENSMUST00000134066 3201 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Sdc1P18828 Wrn-201ENSMUST00000033990 5019 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Sdc1P18828 Orc3-202ENSMUST00000108142 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
Sdc1P18828 Gm43319-201ENSMUST00000198036 2270 ntBASIC4.7□□□□□ -1.66
Sdc1P18828 Gm37846-201ENSMUST00000191840 3774 ntBASIC4.7□□□□□ -1.66
Sdc1P18828 1700041M19Rik-205ENSMUST00000208105 1356 ntTSL 5 BASIC4.7□□□□□ -1.66
Sdc1P18828 Awat1-201ENSMUST00000096361 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Sdc1P18828 Gm12633-201ENSMUST00000117742 1705 ntBASIC4.7□□□□□ -1.66
Sdc1P18828 Nfat5-202ENSMUST00000077440 12773 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
Sdc1P18828 Gm37781-201ENSMUST00000194773 3218 ntBASIC4.7□□□□□ -1.66
Sdc1P18828 Gm19136-201ENSMUST00000190706 2067 ntBASIC4.7□□□□□ -1.66
Sdc1P18828 Angel2-201ENSMUST00000027947 3562 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Sdc1P18828 Vmn1r33-202ENSMUST00000227418 2414 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Sdc1P18828 Vcam1-201ENSMUST00000029574 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Sdc1P18828 Ighv14-4-201ENSMUST00000103475 333 ntAPPRIS ALT2 BASIC4.7□□□□□ -1.66
Sdc1P18828 Ighv12-3-201ENSMUST00000103485 353 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Sdc1P18828 Gm11212-201ENSMUST00000118337 618 ntBASIC4.7□□□□□ -1.66
Sdc1P18828 Rpl5-ps2-201ENSMUST00000119057 891 ntBASIC4.7□□□□□ -1.66
Sdc1P18828 Gm12219-201ENSMUST00000119198 443 ntBASIC4.7□□□□□ -1.66
Sdc1P18828 Gm14294-201ENSMUST00000119749 751 ntBASIC4.7□□□□□ -1.66
Sdc1P18828 Gm12727-201ENSMUST00000119885 359 ntBASIC4.7□□□□□ -1.66
Sdc1P18828 Gm12222-201ENSMUST00000121368 260 ntBASIC4.7□□□□□ -1.66
Sdc1P18828 Gm10658-201ENSMUST00000128125 1241 ntTSL 2 BASIC4.7□□□□□ -1.66
Sdc1P18828 Gm12119-201ENSMUST00000136083 700 ntTSL 3 BASIC4.7□□□□□ -1.66
Sdc1P18828 Gm12925-203ENSMUST00000140510 665 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Sdc1P18828 Gm6133-201ENSMUST00000164064 948 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Sdc1P18828 Gm24081-201ENSMUST00000175177 125 ntBASIC4.7□□□□□ -1.66
Sdc1P18828 Gm37073-201ENSMUST00000192469 1222 ntBASIC4.7□□□□□ -1.66
Sdc1P18828 Gm38122-201ENSMUST00000192679 885 ntBASIC4.7□□□□□ -1.66
Sdc1P18828 Gm7804-202ENSMUST00000194187 854 ntBASIC4.7□□□□□ -1.66
Sdc1P18828 4931440P22Rik-205ENSMUST00000194448 474 ntBASIC4.7□□□□□ -1.66
Sdc1P18828 Gm37662-201ENSMUST00000195649 667 ntTSL 2 BASIC4.7□□□□□ -1.66
Sdc1P18828 Gm42823-201ENSMUST00000197975 256 ntTSL 3 BASIC4.7□□□□□ -1.66
Sdc1P18828 9530003J23Rik-201ENSMUST00000020392 1233 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Sdc1P18828 Gm43974-201ENSMUST00000205080 684 ntBASIC4.7□□□□□ -1.66
Sdc1P18828 Olfr663-201ENSMUST00000209914 959 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Sdc1P18828 Gm19921-201ENSMUST00000210505 703 ntBASIC4.7□□□□□ -1.66
Sdc1P18828 Gm45486-201ENSMUST00000211767 1109 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Sdc1P18828 AC158633.1-201ENSMUST00000219892 649 ntBASIC4.7□□□□□ -1.66
Sdc1P18828 Gm40538-201ENSMUST00000220610 578 ntTSL 5 BASIC4.7□□□□□ -1.66
Sdc1P18828 CT954323.2-201ENSMUST00000222056 213 ntBASIC4.7□□□□□ -1.66
Sdc1P18828 AC154738.4-201ENSMUST00000228310 414 ntBASIC4.7□□□□□ -1.66
Sdc1P18828 Olfr1491-201ENSMUST00000052737 960 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Sdc1P18828 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Sdc1P18828 Fpr-rs6-201ENSMUST00000095636 1020 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Sdc1P18828 Vmn1r168-201ENSMUST00000098704 930 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Sdc1P18828 Abcg3-202ENSMUST00000130644 2668 ntTSL 5 BASIC4.7□□□□□ -1.66
Sdc1P18828 Gm43462-201ENSMUST00000200265 3648 ntBASIC4.7□□□□□ -1.66
Sdc1P18828 Vmn2r4-202ENSMUST00000175724 2742 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
Sdc1P18828 Gm14418-201ENSMUST00000108955 1415 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Sdc1P18828 Olfr1420-203ENSMUST00000217281 2998 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Sdc1P18828 Olfr380-202ENSMUST00000121209 1669 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
Sdc1P18828 Neto2-203ENSMUST00000209479 4936 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Sdc1P18828 Olfr224-202ENSMUST00000215322 1940 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Sdc1P18828 Pot1a-203ENSMUST00000115330 3151 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Sdc1P18828 Gm43831-201ENSMUST00000200461 2598 ntBASIC4.69□□□□□ -1.66
Sdc1P18828 Gm30211-201ENSMUST00000197227 3078 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Sdc1P18828 Zscan4e-202ENSMUST00000210521 1745 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Sdc1P18828 Tnpo1-201ENSMUST00000109399 8445 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Sdc1P18828 Olfr1200-202ENSMUST00000217588 4996 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Sdc1P18828 Gm7919-201ENSMUST00000202043 1389 ntBASIC4.69□□□□□ -1.66
Sdc1P18828 AC110043.1-201ENSMUST00000220278 1627 ntBASIC4.69□□□□□ -1.66
Sdc1P18828 Zfp788-202ENSMUST00000098508 3775 ntAPPRIS P5 TSL 1 (best) BASIC4.69□□□□□ -1.66
Sdc1P18828 Oxr1-205ENSMUST00000166917 2509 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
Sdc1P18828 Nfia-205ENSMUST00000107062 9239 ntTSL 5 BASIC4.69□□□□□ -1.66
Sdc1P18828 Gm22256-201ENSMUST00000102291 107 ntBASIC4.69□□□□□ -1.66
Sdc1P18828 Gm13770-201ENSMUST00000117149 305 ntBASIC4.69□□□□□ -1.66
Sdc1P18828 Gm12565-201ENSMUST00000119004 649 ntBASIC4.69□□□□□ -1.66
Sdc1P18828 Gm13506-201ENSMUST00000120391 1083 ntBASIC4.69□□□□□ -1.66
Sdc1P18828 Gm14331-201ENSMUST00000120396 409 ntBASIC4.69□□□□□ -1.66
Sdc1P18828 Gm15586-201ENSMUST00000121218 528 ntBASIC4.69□□□□□ -1.66
Sdc1P18828 2310081O03Rik-201ENSMUST00000128591 759 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Sdc1P18828 Gm25395-201ENSMUST00000157343 272 ntBASIC4.69□□□□□ -1.66
Sdc1P18828 Gm25846-201ENSMUST00000158013 135 ntBASIC4.69□□□□□ -1.66
Sdc1P18828 Vmn1r-ps45-201ENSMUST00000174106 955 ntBASIC4.69□□□□□ -1.66
Sdc1P18828 AF067061-201ENSMUST00000179905 1174 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Sdc1P18828 Gm5066-201ENSMUST00000188479 822 ntBASIC4.69□□□□□ -1.66
Sdc1P18828 Gm29587-201ENSMUST00000189898 332 ntTSL 5 BASIC4.69□□□□□ -1.66
Sdc1P18828 Gm18428-201ENSMUST00000194986 791 ntBASIC4.69□□□□□ -1.66
Sdc1P18828 4933438B17Rik-202ENSMUST00000196374 576 ntTSL 3 BASIC4.69□□□□□ -1.66
Sdc1P18828 Epgn-202ENSMUST00000202724 805 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Sdc1P18828 Gm44411-201ENSMUST00000204172 349 ntBASIC4.69□□□□□ -1.66
Sdc1P18828 Gm44993-201ENSMUST00000208435 842 ntTSL 3 BASIC4.69□□□□□ -1.66
Sdc1P18828 Gm4587-201ENSMUST00000209135 637 ntBASIC4.69□□□□□ -1.66
Sdc1P18828 Gm32005-201ENSMUST00000212446 959 ntTSL 5 BASIC4.69□□□□□ -1.66
Sdc1P18828 Olfr931-ps1-201ENSMUST00000214941 549 ntBASIC4.69□□□□□ -1.66
Sdc1P18828 Gm7570-201ENSMUST00000215246 698 ntBASIC4.69□□□□□ -1.66
Sdc1P18828 Gm11427-204ENSMUST00000216233 999 ntTSL 5 BASIC4.69□□□□□ -1.66
Sdc1P18828 Gm33782-201ENSMUST00000218518 517 ntTSL 3 BASIC4.69□□□□□ -1.66
Sdc1P18828 Zfand4-204ENSMUST00000221069 501 ntTSL 3 BASIC4.69□□□□□ -1.66
Sdc1P18828 AC159208.1-201ENSMUST00000221403 649 ntBASIC4.69□□□□□ -1.66
Sdc1P18828 Gm10037-204ENSMUST00000222626 692 ntAPPRIS ALT2 TSL 3 BASIC4.69□□□□□ -1.66
Sdc1P18828 Gm16497-202ENSMUST00000223480 557 ntTSL 3 BASIC4.69□□□□□ -1.66
Sdc1P18828 3830406C13Rik-203ENSMUST00000223631 1014 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 79 ms