Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Jakmip1-216ENSMUST00000212997 138 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Col6a3E9PWQ3 Rab7-ps1-201ENSMUST00000213253 622 ntBASIC5.6□□□□□ -1.51
Col6a3E9PWQ3 n-R5s180-201ENSMUST00000082770 106 ntBASIC5.6□□□□□ -1.51
Col6a3E9PWQ3 P2ry12-204ENSMUST00000199609 2157 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
Col6a3E9PWQ3 Gm13058-201ENSMUST00000117097 1435 ntBASIC5.6□□□□□ -1.51
Col6a3E9PWQ3 Inhbe-201ENSMUST00000059718 5319 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col6a3E9PWQ3 Fam160a1-202ENSMUST00000118408 4445 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Col6a3E9PWQ3 BB019430-202ENSMUST00000218015 1320 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Col6a3E9PWQ3 Kat6b-207ENSMUST00000182855 6791 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col6a3E9PWQ3 Rtel1-202ENSMUST00000054622 4401 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
Col6a3E9PWQ3 Cdh2-202ENSMUST00000115850 3785 ntTSL 5 BASIC5.6□□□□□ -1.51
Col6a3E9PWQ3 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
Col6a3E9PWQ3 AC153494.1-201ENSMUST00000218664 3041 ntBASIC5.6□□□□□ -1.51
Col6a3E9PWQ3 Vmn1r30-202ENSMUST00000226334 1946 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Col6a3E9PWQ3 AC122346.1-201ENSMUST00000225266 3732 ntBASIC5.6□□□□□ -1.51
Col6a3E9PWQ3 Plec-217ENSMUST00000169438 14827 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Col6a3E9PWQ3 Ankrd55-205ENSMUST00000223871 3209 ntBASIC5.59□□□□□ -1.51
Col6a3E9PWQ3 Gm23274-201ENSMUST00000104056 130 ntBASIC5.59□□□□□ -1.51
Col6a3E9PWQ3 Zfp973-201ENSMUST00000108985 1295 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Col6a3E9PWQ3 Gm14095-201ENSMUST00000134264 516 ntTSL 3 BASIC5.59□□□□□ -1.51
Col6a3E9PWQ3 Gm23465-201ENSMUST00000157134 262 ntBASIC5.59□□□□□ -1.51
Col6a3E9PWQ3 5830405F06Rik-202ENSMUST00000193357 844 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Col6a3E9PWQ3 Fbxw15-203ENSMUST00000198397 927 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Col6a3E9PWQ3 6430710M23Rik-201ENSMUST00000210843 1191 ntBASIC5.59□□□□□ -1.51
Col6a3E9PWQ3 Olfr1341-201ENSMUST00000061215 939 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Col6a3E9PWQ3 AC134577.3-201ENSMUST00000226490 3000 ntBASIC5.59□□□□□ -1.51
Col6a3E9PWQ3 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Col6a3E9PWQ3 Lingo2-203ENSMUST00000108122 3362 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Col6a3E9PWQ3 Lhx9-203ENSMUST00000093486 4551 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Col6a3E9PWQ3 Gm13416-201ENSMUST00000117264 1612 ntBASIC5.59□□□□□ -1.51
Col6a3E9PWQ3 Gm10184-201ENSMUST00000086423 1939 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Col6a3E9PWQ3 Gm42653-201ENSMUST00000200644 2839 ntBASIC5.59□□□□□ -1.51
Col6a3E9PWQ3 Ndst3-203ENSMUST00000132112 4460 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Col6a3E9PWQ3 Pld1-202ENSMUST00000120834 4849 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Col6a3E9PWQ3 Gm40518-202ENSMUST00000214538 4080 ntTSL 5 BASIC5.59□□□□□ -1.51
Col6a3E9PWQ3 Gm43528-201ENSMUST00000199492 1674 ntBASIC5.59□□□□□ -1.51
Col6a3E9PWQ3 Obox4-ps27-201ENSMUST00000179203 1362 ntBASIC5.59□□□□□ -1.51
Col6a3E9PWQ3 Olfr361-201ENSMUST00000100145 969 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Col6a3E9PWQ3 Gm8614-201ENSMUST00000182528 978 ntBASIC5.59□□□□□ -1.51
Col6a3E9PWQ3 Gm5045-201ENSMUST00000027054 810 ntBASIC5.59□□□□□ -1.51
Col6a3E9PWQ3 Mup3-201ENSMUST00000084531 938 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Col6a3E9PWQ3 Anln-201ENSMUST00000040912 4605 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Col6a3E9PWQ3 Gm20644-201ENSMUST00000176721 2063 ntBASIC5.59□□□□□ -1.51
Col6a3E9PWQ3 Cbx5-201ENSMUST00000108813 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Col6a3E9PWQ3 Cltc-202ENSMUST00000103186 6519 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Col6a3E9PWQ3 Gm45843-201ENSMUST00000212317 4597 ntTSL 5 BASIC5.59□□□□□ -1.51
Col6a3E9PWQ3 Smarca2-203ENSMUST00000112637 1962 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Col6a3E9PWQ3 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Col6a3E9PWQ3 Fpgt-201ENSMUST00000066568 3518 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Col6a3E9PWQ3 Gm44956-201ENSMUST00000208277 2887 ntTSL 5 BASIC5.59□□□□□ -1.51
Col6a3E9PWQ3 Patj-202ENSMUST00000041284 7340 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Col6a3E9PWQ3 Abca17-202ENSMUST00000121226 5317 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Col6a3E9PWQ3 Lrrc3b-202ENSMUST00000163937 1424 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
Col6a3E9PWQ3 Zfp287-201ENSMUST00000005399 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.52
Col6a3E9PWQ3 Gtf2h1-202ENSMUST00000107644 2187 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
Col6a3E9PWQ3 Gm13584-201ENSMUST00000137134 603 ntTSL 3 BASIC5.59□□□□□ -1.52
Col6a3E9PWQ3 Gm14349-201ENSMUST00000137155 902 ntBASIC5.59□□□□□ -1.52
Col6a3E9PWQ3 Gm10784-201ENSMUST00000178715 238 ntBASIC5.59□□□□□ -1.52
Col6a3E9PWQ3 Gm27754-201ENSMUST00000183340 126 ntBASIC5.59□□□□□ -1.52
Col6a3E9PWQ3 Gm19131-201ENSMUST00000203408 789 ntBASIC5.59□□□□□ -1.52
Col6a3E9PWQ3 Olfr524-202ENSMUST00000215815 5044 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
Col6a3E9PWQ3 Lcp2-201ENSMUST00000052413 3644 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.52
Col6a3E9PWQ3 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Col6a3E9PWQ3 Ncoa1-209ENSMUST00000220434 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Col6a3E9PWQ3 AC164107.1-202ENSMUST00000228953 1816 ntBASIC5.58□□□□□ -1.52
Col6a3E9PWQ3 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Col6a3E9PWQ3 Pcdh15-217ENSMUST00000134009 3300 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Col6a3E9PWQ3 Diaph2-202ENSMUST00000113320 8196 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Col6a3E9PWQ3 Gm14857-201ENSMUST00000117862 3185 ntBASIC5.58□□□□□ -1.52
Col6a3E9PWQ3 Zfp965-202ENSMUST00000109042 1271 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Col6a3E9PWQ3 Mptx2-201ENSMUST00000111224 794 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Col6a3E9PWQ3 Zfp973-202ENSMUST00000121956 1271 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Col6a3E9PWQ3 Gm14011-201ENSMUST00000145178 302 ntTSL 2 BASIC5.58□□□□□ -1.52
Col6a3E9PWQ3 Gm15338-201ENSMUST00000151884 552 ntTSL 3 BASIC5.58□□□□□ -1.52
Col6a3E9PWQ3 Gm4842-201ENSMUST00000183237 835 ntBASIC5.58□□□□□ -1.52
Col6a3E9PWQ3 Gm26797-203ENSMUST00000216452 706 ntTSL 5 BASIC5.58□□□□□ -1.52
Col6a3E9PWQ3 AC154283.1-201ENSMUST00000228417 389 ntBASIC5.58□□□□□ -1.52
Col6a3E9PWQ3 Olfr199-201ENSMUST00000099657 931 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Col6a3E9PWQ3 Fbxl20-201ENSMUST00000103143 8601 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Col6a3E9PWQ3 Bbs12-201ENSMUST00000057975 2433 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
Col6a3E9PWQ3 Ncf2-202ENSMUST00000186568 3550 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Col6a3E9PWQ3 Gm4787-201ENSMUST00000062182 2474 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Col6a3E9PWQ3 Gm3985-201ENSMUST00000132101 2515 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Col6a3E9PWQ3 Tlr11-202ENSMUST00000185091 3207 ntAPPRIS P2 TSL 2 BASIC5.58□□□□□ -1.52
Col6a3E9PWQ3 Dnajc6-203ENSMUST00000106929 5128 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
Col6a3E9PWQ3 Gm36229-201ENSMUST00000218737 1855 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Col6a3E9PWQ3 Gm21977-201ENSMUST00000163725 1402 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Col6a3E9PWQ3 Gm8068-201ENSMUST00000167440 1402 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Col6a3E9PWQ3 Fchsd2-202ENSMUST00000098250 4316 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Col6a3E9PWQ3 Nlgn3-206ENSMUST00000151528 8541 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Col6a3E9PWQ3 Ccdc93-201ENSMUST00000036025 7274 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
Col6a3E9PWQ3 Ncoa4-202ENSMUST00000163336 4065 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Col6a3E9PWQ3 Sipa1l2-201ENSMUST00000108775 6365 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
Col6a3E9PWQ3 Klra14-ps-201ENSMUST00000119532 802 ntBASIC5.58□□□□□ -1.52
Col6a3E9PWQ3 Gm22819-201ENSMUST00000157445 303 ntBASIC5.58□□□□□ -1.52
Col6a3E9PWQ3 Gm23781-201ENSMUST00000157940 308 ntBASIC5.58□□□□□ -1.52
Col6a3E9PWQ3 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC5.58□□□□□ -1.52
Col6a3E9PWQ3 Olfr1084-201ENSMUST00000216851 961 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Col6a3E9PWQ3 4932416K20Rik-201ENSMUST00000093229 3554 ntBASIC5.58□□□□□ -1.52
Col6a3E9PWQ3 Olfr430-203ENSMUST00000214390 3300 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms