Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 H3f3a-ps1-201ENSMUST00000119546 410 ntBASIC6.78□□□□□ -1.32
Trim39Q9ESN2 Gm7916-201ENSMUST00000120325 456 ntBASIC6.78□□□□□ -1.32
Trim39Q9ESN2 Gm12123-201ENSMUST00000120348 472 ntBASIC6.78□□□□□ -1.32
Trim39Q9ESN2 Gm13357-201ENSMUST00000120528 537 ntBASIC6.78□□□□□ -1.32
Trim39Q9ESN2 Mup-ps17-201ENSMUST00000120723 218 ntBASIC6.78□□□□□ -1.32
Trim39Q9ESN2 Gm11895-201ENSMUST00000122165 467 ntBASIC6.78□□□□□ -1.32
Trim39Q9ESN2 Mir1903-201ENSMUST00000122574 80 ntBASIC6.78□□□□□ -1.32
Trim39Q9ESN2 4930483K19Rik-201ENSMUST00000127576 1237 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Trim39Q9ESN2 Gm15501-202ENSMUST00000140687 625 ntBASIC6.78□□□□□ -1.32
Trim39Q9ESN2 8030443G20Rik-201ENSMUST00000140919 903 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Trim39Q9ESN2 6430503K07Rik-201ENSMUST00000144411 476 ntTSL 2 BASIC6.78□□□□□ -1.32
Trim39Q9ESN2 Gm25437-201ENSMUST00000158282 132 ntBASIC6.78□□□□□ -1.32
Trim39Q9ESN2 Gm22945-201ENSMUST00000158557 157 ntBASIC6.78□□□□□ -1.32
Trim39Q9ESN2 Gm4340-201ENSMUST00000163113 807 ntAPPRIS ALT2 BASIC6.78□□□□□ -1.32
Trim39Q9ESN2 Galnt5-203ENSMUST00000166729 3812 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
Trim39Q9ESN2 Gm4781-201ENSMUST00000167995 781 ntBASIC6.78□□□□□ -1.32
Trim39Q9ESN2 Mir6411-201ENSMUST00000183556 108 ntBASIC6.78□□□□□ -1.32
Trim39Q9ESN2 Gm6717-201ENSMUST00000185549 838 ntBASIC6.78□□□□□ -1.32
Trim39Q9ESN2 Il19-203ENSMUST00000187410 1135 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Trim39Q9ESN2 Gm9451-201ENSMUST00000188491 604 ntBASIC6.78□□□□□ -1.32
Trim39Q9ESN2 1700030F04Rik-202ENSMUST00000188781 617 ntTSL 5 BASIC6.78□□□□□ -1.32
Trim39Q9ESN2 Gm28728-201ENSMUST00000189087 405 ntBASIC6.78□□□□□ -1.32
Trim39Q9ESN2 Gm28191-201ENSMUST00000189112 211 ntBASIC6.78□□□□□ -1.32
Trim39Q9ESN2 Gm28239-201ENSMUST00000190225 447 ntBASIC6.78□□□□□ -1.32
Trim39Q9ESN2 Gm7369-201ENSMUST00000192738 936 ntBASIC6.78□□□□□ -1.32
Trim39Q9ESN2 Gm37173-201ENSMUST00000194498 1017 ntBASIC6.78□□□□□ -1.32
Trim39Q9ESN2 Trbv24-201ENSMUST00000194614 347 ntBASIC6.78□□□□□ -1.32
Trim39Q9ESN2 9430087J23Rik-201ENSMUST00000195414 1152 ntBASIC6.78□□□□□ -1.32
Trim39Q9ESN2 Cacnb2-216ENSMUST00000195841 503 ntTSL 3 BASIC6.78□□□□□ -1.32
Trim39Q9ESN2 4632404H12Rik-202ENSMUST00000195940 4671 ntBASIC6.78□□□□□ -1.32
Trim39Q9ESN2 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC6.78□□□□□ -1.32
Trim39Q9ESN2 Gm32842-201ENSMUST00000212653 738 ntBASIC6.78□□□□□ -1.32
Trim39Q9ESN2 Gm35274-201ENSMUST00000217709 646 ntTSL 5 BASIC6.78□□□□□ -1.32
Trim39Q9ESN2 AC069562.1-201ENSMUST00000224206 434 ntBASIC6.78□□□□□ -1.32
Trim39Q9ESN2 AC154806.1-202ENSMUST00000227949 885 ntBASIC6.78□□□□□ -1.32
Trim39Q9ESN2 Lrrc69-201ENSMUST00000023917 1242 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Trim39Q9ESN2 Capza3-201ENSMUST00000043797 1222 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Trim39Q9ESN2 Fate1-201ENSMUST00000066116 938 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Trim39Q9ESN2 Wdr66-201ENSMUST00000069311 978 ntTSL 5 BASIC6.78□□□□□ -1.32
Trim39Q9ESN2 Gm23452-201ENSMUST00000083327 107 ntBASIC6.78□□□□□ -1.32
Trim39Q9ESN2 Crnkl1-201ENSMUST00000001818 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Trim39Q9ESN2 Sorbs2-202ENSMUST00000067107 5597 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Trim39Q9ESN2 Cfap57-202ENSMUST00000081921 3750 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Trim39Q9ESN2 Nif3l1-201ENSMUST00000087521 3769 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Trim39Q9ESN2 Emcn-201ENSMUST00000119475 1357 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
Trim39Q9ESN2 Gm36963-201ENSMUST00000193506 2324 ntBASIC6.78□□□□□ -1.32
Trim39Q9ESN2 Slc7a2-201ENSMUST00000057784 7910 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
Trim39Q9ESN2 Etl4-209ENSMUST00000114627 7413 ntAPPRIS P3 TSL 5 BASIC6.78□□□□□ -1.32
Trim39Q9ESN2 Zfp748-202ENSMUST00000181892 5293 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Trim39Q9ESN2 Carf-206ENSMUST00000180952 2157 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
Trim39Q9ESN2 Atf2-203ENSMUST00000100009 3936 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Trim39Q9ESN2 Gm4221-202ENSMUST00000181765 2988 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Trim39Q9ESN2 Olfr976-202ENSMUST00000213171 2998 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Trim39Q9ESN2 AC158988.1-201ENSMUST00000226731 2624 ntBASIC6.78□□□□□ -1.32
Trim39Q9ESN2 Crem-204ENSMUST00000122958 2254 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Trim39Q9ESN2 Vmn1r171-201ENSMUST00000078458 1581 ntAPPRIS P2 BASIC6.78□□□□□ -1.32
Trim39Q9ESN2 Lpin1-204ENSMUST00000221230 4114 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Trim39Q9ESN2 Gm26523-201ENSMUST00000180713 1658 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
Trim39Q9ESN2 Gm36388-201ENSMUST00000191663 1675 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
Trim39Q9ESN2 Ampd3-201ENSMUST00000005829 4094 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Trim39Q9ESN2 Cped1-202ENSMUST00000115383 5690 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Trim39Q9ESN2 Nt5c1b-220ENSMUST00000223534 1798 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Trim39Q9ESN2 Dennd2c-202ENSMUST00000172288 4979 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Trim39Q9ESN2 Gm37730-201ENSMUST00000192432 2211 ntBASIC6.77□□□□□ -1.33
Trim39Q9ESN2 Olfr168-202ENSMUST00000213480 2205 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Trim39Q9ESN2 4930539J05Rik-201ENSMUST00000181619 1406 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Trim39Q9ESN2 Mdga2-211ENSMUST00000222623 1449 ntTSL 5 BASIC6.77□□□□□ -1.33
Trim39Q9ESN2 Lncenc1-202ENSMUST00000179324 2764 ntTSL 2 BASIC6.77□□□□□ -1.33
Trim39Q9ESN2 Olfr1045-202ENSMUST00000215763 2960 ntAPPRIS P1 TSL 3 BASIC6.77□□□□□ -1.33
Trim39Q9ESN2 Vmn1r11-202ENSMUST00000226968 2522 ntAPPRIS P2 BASIC6.77□□□□□ -1.33
Trim39Q9ESN2 Olfr1441-202ENSMUST00000214153 2078 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Trim39Q9ESN2 Meis1-208ENSMUST00000177417 5308 ntTSL 5 BASIC6.77□□□□□ -1.33
Trim39Q9ESN2 Gm2026-201ENSMUST00000109007 1621 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Trim39Q9ESN2 Gm35206-201ENSMUST00000217945 1642 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Trim39Q9ESN2 Ubtfl1-201ENSMUST00000098973 1649 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Trim39Q9ESN2 Hsdl2-202ENSMUST00000107528 2626 ntTSL 2 BASIC6.77□□□□□ -1.33
Trim39Q9ESN2 Gm43429-201ENSMUST00000197889 2251 ntBASIC6.77□□□□□ -1.33
Trim39Q9ESN2 St7-203ENSMUST00000053148 2288 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Trim39Q9ESN2 4930522H14Rik-202ENSMUST00000102725 854 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
Trim39Q9ESN2 Igkv9-123-201ENSMUST00000103313 377 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Trim39Q9ESN2 Gm22660-201ENSMUST00000104193 130 ntBASIC6.77□□□□□ -1.33
Trim39Q9ESN2 Gm14322-201ENSMUST00000108942 1074 ntTSL 2 BASIC6.77□□□□□ -1.33
Trim39Q9ESN2 Mobp-203ENSMUST00000111627 481 ntAPPRIS P1 TSL 2 BASIC6.77□□□□□ -1.33
Trim39Q9ESN2 Ncald-202ENSMUST00000116445 858 ntAPPRIS P1 TSL 3 BASIC6.77□□□□□ -1.33
Trim39Q9ESN2 Gm12077-201ENSMUST00000117049 364 ntBASIC6.77□□□□□ -1.33
Trim39Q9ESN2 Gm14755-201ENSMUST00000118037 384 ntBASIC6.77□□□□□ -1.33
Trim39Q9ESN2 Gm13593-201ENSMUST00000121329 692 ntBASIC6.77□□□□□ -1.33
Trim39Q9ESN2 Gm13221-201ENSMUST00000121712 430 ntBASIC6.77□□□□□ -1.33
Trim39Q9ESN2 n-R5s47-201ENSMUST00000122516 119 ntBASIC6.77□□□□□ -1.33
Trim39Q9ESN2 Gm14329-201ENSMUST00000136027 591 ntTSL 3 BASIC6.77□□□□□ -1.33
Trim39Q9ESN2 BC016548-201ENSMUST00000144657 640 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Trim39Q9ESN2 Gm4835-201ENSMUST00000155839 972 ntBASIC6.77□□□□□ -1.33
Trim39Q9ESN2 Gm16143-201ENSMUST00000155982 538 ntTSL 5 BASIC6.77□□□□□ -1.33
Trim39Q9ESN2 9130230L23Rik-201ENSMUST00000165250 492 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Trim39Q9ESN2 Gm3727-201ENSMUST00000168458 995 ntAPPRIS P5 TSL 5 BASIC6.77□□□□□ -1.33
Trim39Q9ESN2 Cldn20-201ENSMUST00000168560 660 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Trim39Q9ESN2 Gm17234-201ENSMUST00000172128 392 ntTSL 3 BASIC6.77□□□□□ -1.33
Trim39Q9ESN2 Gm2026-203ENSMUST00000174416 532 ntTSL 3 BASIC6.77□□□□□ -1.33
Trim39Q9ESN2 Trav7n-6-201ENSMUST00000178100 381 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Trim39Q9ESN2 Olfr936-201ENSMUST00000178303 936 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 103 ms