Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Slf1-201ENSMUST00000151524 3747 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Rrp8Q9DB85 Gm37959-201ENSMUST00000191700 2897 ntBASIC5.85□□□□□ -1.47
Rrp8Q9DB85 Ttk-201ENSMUST00000070326 2871 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Rrp8Q9DB85 Gm44046-201ENSMUST00000203145 2678 ntBASIC5.85□□□□□ -1.47
Rrp8Q9DB85 Cd180-204ENSMUST00000171267 1787 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Rrp8Q9DB85 Gm5930-201ENSMUST00000111863 1746 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Rrp8Q9DB85 Vps50-201ENSMUST00000001412 3788 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Rrp8Q9DB85 Bicd1-201ENSMUST00000003544 2928 ntAPPRIS ALT1 TSL 5 BASIC5.85□□□□□ -1.47
Rrp8Q9DB85 Fcrl5-202ENSMUST00000166297 1527 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
Rrp8Q9DB85 Olfr378-201ENSMUST00000069790 1508 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
Rrp8Q9DB85 Cavin4-201ENSMUST00000030033 2054 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Rrp8Q9DB85 Arhgef9-203ENSMUST00000113878 5012 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
Rrp8Q9DB85 Gm8979-201ENSMUST00000183386 7296 ntBASIC5.84□□□□□ -1.47
Rrp8Q9DB85 Tank-205ENSMUST00000112502 2016 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
Rrp8Q9DB85 Tank-201ENSMUST00000078074 2018 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
Rrp8Q9DB85 AC165080.4-201ENSMUST00000213591 9507 ntTSL 5 BASIC5.84□□□□□ -1.47
Rrp8Q9DB85 Gm43502-201ENSMUST00000200263 2596 ntBASIC5.84□□□□□ -1.47
Rrp8Q9DB85 Gm31822-201ENSMUST00000216096 2572 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Rrp8Q9DB85 Nexn-201ENSMUST00000046045 2564 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Rrp8Q9DB85 AC158595.1-201ENSMUST00000217989 1435 ntBASIC5.84□□□□□ -1.47
Rrp8Q9DB85 1700030N03Rik-203ENSMUST00000190575 3146 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Rrp8Q9DB85 Cylc1-202ENSMUST00000210720 1969 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
Rrp8Q9DB85 Vmn2r13-201ENSMUST00000053253 2496 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Rrp8Q9DB85 Gm43211-201ENSMUST00000196901 1899 ntBASIC5.84□□□□□ -1.47
Rrp8Q9DB85 Ms4a13-202ENSMUST00000188464 1301 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Rrp8Q9DB85 Mir99ahg-214ENSMUST00000183333 3422 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Rrp8Q9DB85 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Rrp8Q9DB85 Xrn1-201ENSMUST00000034981 5499 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
Rrp8Q9DB85 Ssxb2-202ENSMUST00000103000 750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Rrp8Q9DB85 Gm24886-201ENSMUST00000104384 123 ntBASIC5.84□□□□□ -1.47
Rrp8Q9DB85 Gm25564-201ENSMUST00000104604 132 ntBASIC5.84□□□□□ -1.47
Rrp8Q9DB85 Gm14106-201ENSMUST00000119382 438 ntBASIC5.84□□□□□ -1.47
Rrp8Q9DB85 Chchd7-204ENSMUST00000119403 695 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
Rrp8Q9DB85 Gm13537-201ENSMUST00000120467 267 ntBASIC5.84□□□□□ -1.47
Rrp8Q9DB85 n-R5s48-201ENSMUST00000122482 110 ntBASIC5.84□□□□□ -1.47
Rrp8Q9DB85 Gm22959-201ENSMUST00000122514 303 ntBASIC5.84□□□□□ -1.47
Rrp8Q9DB85 Zfp783-203ENSMUST00000130463 537 ntTSL 2 BASIC5.84□□□□□ -1.47
Rrp8Q9DB85 Gm12405-201ENSMUST00000141120 660 ntTSL 3 BASIC5.84□□□□□ -1.47
Rrp8Q9DB85 Gm25826-201ENSMUST00000157090 137 ntBASIC5.84□□□□□ -1.47
Rrp8Q9DB85 Gm26086-201ENSMUST00000157902 263 ntBASIC5.84□□□□□ -1.47
Rrp8Q9DB85 Gm22569-201ENSMUST00000175545 124 ntBASIC5.84□□□□□ -1.47
Rrp8Q9DB85 Mir3090-201ENSMUST00000175597 87 ntBASIC5.84□□□□□ -1.47
Rrp8Q9DB85 Gm5430-201ENSMUST00000182525 915 ntBASIC5.84□□□□□ -1.47
Rrp8Q9DB85 1700031M16Rik-206ENSMUST00000191037 711 ntAPPRIS P5 TSL 3 BASIC5.84□□□□□ -1.47
Rrp8Q9DB85 Gm43724-201ENSMUST00000197516 226 ntBASIC5.84□□□□□ -1.47
Rrp8Q9DB85 Gm33601-201ENSMUST00000210001 961 ntBASIC5.84□□□□□ -1.47
Rrp8Q9DB85 Gm18705-201ENSMUST00000215985 913 ntBASIC5.84□□□□□ -1.47
Rrp8Q9DB85 4930486F22Rik-201ENSMUST00000218077 559 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Rrp8Q9DB85 AC164164.2-201ENSMUST00000221809 785 ntBASIC5.84□□□□□ -1.47
Rrp8Q9DB85 AC160105.1-201ENSMUST00000221931 682 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Rrp8Q9DB85 Gm10037-204ENSMUST00000222626 692 ntAPPRIS ALT2 TSL 3 BASIC5.84□□□□□ -1.47
Rrp8Q9DB85 AC126554.2-201ENSMUST00000223259 400 ntBASIC5.84□□□□□ -1.47
Rrp8Q9DB85 AC156802.1-201ENSMUST00000223623 579 ntBASIC5.84□□□□□ -1.47
Rrp8Q9DB85 Ssxb2-201ENSMUST00000023931 927 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
Rrp8Q9DB85 Vmn1r70-201ENSMUST00000055847 897 ntAPPRIS P2 BASIC5.84□□□□□ -1.47
Rrp8Q9DB85 Olfr161-201ENSMUST00000061541 942 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Rrp8Q9DB85 Ifitm6-201ENSMUST00000081924 663 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Rrp8Q9DB85 Epgn-201ENSMUST00000041516 1760 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Rrp8Q9DB85 Cfap57-202ENSMUST00000081921 3750 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Rrp8Q9DB85 Kif9-203ENSMUST00000197248 3184 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Rrp8Q9DB85 Mipol1-203ENSMUST00000130447 2171 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
Rrp8Q9DB85 Mipol1-208ENSMUST00000153137 2158 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
Rrp8Q9DB85 AC130661.1-201ENSMUST00000218248 1680 ntBASIC5.84□□□□□ -1.47
Rrp8Q9DB85 Gm37897-201ENSMUST00000192613 3561 ntBASIC5.84□□□□□ -1.47
Rrp8Q9DB85 Il1rapl2-201ENSMUST00000075471 2061 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Rrp8Q9DB85 Platr25-201ENSMUST00000143260 2509 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Rrp8Q9DB85 Tcf7-201ENSMUST00000086844 2471 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
Rrp8Q9DB85 Rfc1-203ENSMUST00000203581 4689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.48
Rrp8Q9DB85 RMST_1.1-210ENSMUST00000219606 2891 ntTSL 5 BASIC5.84□□□□□ -1.48
Rrp8Q9DB85 Zan-201ENSMUST00000117564 16481 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
Rrp8Q9DB85 Aadacl3-201ENSMUST00000105749 3153 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Rrp8Q9DB85 Gm38036-201ENSMUST00000194586 3564 ntBASIC5.83□□□□□ -1.48
Rrp8Q9DB85 Cdh6-201ENSMUST00000036439 8167 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Rrp8Q9DB85 Gm38156-201ENSMUST00000194601 2260 ntBASIC5.83□□□□□ -1.48
Rrp8Q9DB85 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Rrp8Q9DB85 Olfr1023-202ENSMUST00000213441 4740 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Rrp8Q9DB85 Gm20750-201ENSMUST00000194274 3515 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Rrp8Q9DB85 Stk36-203ENSMUST00000113694 629 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Rrp8Q9DB85 Gm14520-201ENSMUST00000119258 387 ntBASIC5.83□□□□□ -1.48
Rrp8Q9DB85 Mup-ps19-201ENSMUST00000120390 519 ntBASIC5.83□□□□□ -1.48
Rrp8Q9DB85 Gm15265-201ENSMUST00000133494 551 ntTSL 2 BASIC5.83□□□□□ -1.48
Rrp8Q9DB85 Tnfsf13os-202ENSMUST00000144033 578 ntTSL 5 BASIC5.83□□□□□ -1.48
Rrp8Q9DB85 Gm16112-201ENSMUST00000159075 382 ntBASIC5.83□□□□□ -1.48
Rrp8Q9DB85 Gm6205-201ENSMUST00000165424 1080 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Rrp8Q9DB85 Spint4-201ENSMUST00000017454 751 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Rrp8Q9DB85 Gm20549-201ENSMUST00000174804 429 ntBASIC5.83□□□□□ -1.48
Rrp8Q9DB85 Gm498-203ENSMUST00000179036 990 ntTSL 5 BASIC5.83□□□□□ -1.48
Rrp8Q9DB85 Rian-205ENSMUST00000182100 1017 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Rrp8Q9DB85 AV026068-209ENSMUST00000189143 517 ntTSL 3 BASIC5.83□□□□□ -1.48
Rrp8Q9DB85 Gm18348-201ENSMUST00000191227 820 ntBASIC5.83□□□□□ -1.48
Rrp8Q9DB85 Gm38291-201ENSMUST00000193671 259 ntBASIC5.83□□□□□ -1.48
Rrp8Q9DB85 4930590L14Rik-201ENSMUST00000196030 836 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Rrp8Q9DB85 Gm43436-201ENSMUST00000199308 147 ntBASIC5.83□□□□□ -1.48
Rrp8Q9DB85 Gm44992-209ENSMUST00000209680 1083 ntTSL 5 BASIC5.83□□□□□ -1.48
Rrp8Q9DB85 AC158630.1-201ENSMUST00000214387 993 ntTSL 5 BASIC5.83□□□□□ -1.48
Rrp8Q9DB85 Amd-ps6-201ENSMUST00000214455 1003 ntBASIC5.83□□□□□ -1.48
Rrp8Q9DB85 AC117797.1-201ENSMUST00000223977 695 ntBASIC5.83□□□□□ -1.48
Rrp8Q9DB85 Ube2dnl2-201ENSMUST00000062695 743 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Rrp8Q9DB85 AC159006.2-201ENSMUST00000228734 4144 ntBASIC5.83□□□□□ -1.48
Rrp8Q9DB85 Sgip1-203ENSMUST00000080728 3712 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 90.5 ms