Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Gm24402-201ENSMUST00000157873 91 ntBASIC7.12□□□□□ -1.27
Ccdc9Q8VC31 Csnk2b-209ENSMUST00000174779 632 ntTSL 2 BASIC7.12□□□□□ -1.27
Ccdc9Q8VC31 Gm25574-201ENSMUST00000175245 249 ntBASIC7.12□□□□□ -1.27
Ccdc9Q8VC31 Gm27152-201ENSMUST00000183828 99 ntBASIC7.12□□□□□ -1.27
Ccdc9Q8VC31 Vmn1r189-201ENSMUST00000186062 1137 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Ccdc9Q8VC31 Gm42782-201ENSMUST00000197286 522 ntBASIC7.12□□□□□ -1.27
Ccdc9Q8VC31 Gm43315-201ENSMUST00000198120 313 ntBASIC7.12□□□□□ -1.27
Ccdc9Q8VC31 Gm45181-201ENSMUST00000207878 449 ntTSL 3 BASIC7.12□□□□□ -1.27
Ccdc9Q8VC31 Gm9869-202ENSMUST00000214999 679 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Ccdc9Q8VC31 AC102542.1-201ENSMUST00000225204 1138 ntBASIC7.12□□□□□ -1.27
Ccdc9Q8VC31 CT956049.1-201ENSMUST00000225671 763 ntBASIC7.12□□□□□ -1.27
Ccdc9Q8VC31 AC125064.1-201ENSMUST00000225801 295 ntBASIC7.12□□□□□ -1.27
Ccdc9Q8VC31 Vmn1r178-201ENSMUST00000078593 915 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
Ccdc9Q8VC31 Lama2-207ENSMUST00000189575 4244 ntTSL 5 BASIC7.12□□□□□ -1.27
Ccdc9Q8VC31 Gm37760-201ENSMUST00000194726 3841 ntBASIC7.12□□□□□ -1.27
Ccdc9Q8VC31 Olfr266-202ENSMUST00000213616 2195 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Ccdc9Q8VC31 Kcnj2-201ENSMUST00000042970 5444 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Ccdc9Q8VC31 Pde1a-203ENSMUST00000102652 1646 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
Ccdc9Q8VC31 Olfr1260-202ENSMUST00000111512 4226 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
Ccdc9Q8VC31 Nipal1-201ENSMUST00000087212 4206 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
Ccdc9Q8VC31 Vmn2r34-201ENSMUST00000173459 3616 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
Ccdc9Q8VC31 Gm18879-201ENSMUST00000221187 1537 ntBASIC7.11□□□□□ -1.27
Ccdc9Q8VC31 Zscan4-ps1-201ENSMUST00000165848 2015 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Ccdc9Q8VC31 E330016L19Rik-201ENSMUST00000140614 1959 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Ccdc9Q8VC31 Adgrv1-201ENSMUST00000095585 19338 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Ccdc9Q8VC31 Olfr459-203ENSMUST00000214976 3770 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
Ccdc9Q8VC31 Fbxw26-201ENSMUST00000071917 1824 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Ccdc9Q8VC31 Gnal-202ENSMUST00000076605 5223 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Ccdc9Q8VC31 Vmn2r124-201ENSMUST00000176802 2568 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
Ccdc9Q8VC31 Gm14326-201ENSMUST00000108928 767 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Ccdc9Q8VC31 Vamp7-ps-201ENSMUST00000120334 655 ntBASIC7.11□□□□□ -1.27
Ccdc9Q8VC31 Gm15743-201ENSMUST00000129645 242 ntTSL 3 BASIC7.11□□□□□ -1.27
Ccdc9Q8VC31 Fam229b-205ENSMUST00000135785 674 ntAPPRIS P1 TSL 3 BASIC7.11□□□□□ -1.27
Ccdc9Q8VC31 Gm17066-202ENSMUST00000165350 1113 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Ccdc9Q8VC31 Gm17024-201ENSMUST00000165676 634 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Ccdc9Q8VC31 Vmn2r-ps86-201ENSMUST00000174812 871 ntBASIC7.11□□□□□ -1.27
Ccdc9Q8VC31 Gm26993-201ENSMUST00000182766 789 ntBASIC7.11□□□□□ -1.27
Ccdc9Q8VC31 Gm29043-201ENSMUST00000186371 623 ntTSL 5 BASIC7.11□□□□□ -1.27
Ccdc9Q8VC31 Gm28147-201ENSMUST00000187133 621 ntTSL 5 BASIC7.11□□□□□ -1.27
Ccdc9Q8VC31 Scgb3a2-202ENSMUST00000187157 550 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Ccdc9Q8VC31 1700108J01Rik-201ENSMUST00000187423 484 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Ccdc9Q8VC31 1700011B04Rik-201ENSMUST00000189140 651 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Ccdc9Q8VC31 Gm29363-201ENSMUST00000189365 621 ntTSL 5 BASIC7.11□□□□□ -1.27
Ccdc9Q8VC31 Gm38204-201ENSMUST00000194835 619 ntTSL 2 BASIC7.11□□□□□ -1.27
Ccdc9Q8VC31 Gm38102-202ENSMUST00000196428 174 ntTSL 5 BASIC7.11□□□□□ -1.27
Ccdc9Q8VC31 Gm20239-201ENSMUST00000196610 982 ntBASIC7.11□□□□□ -1.27
Ccdc9Q8VC31 Zfp799-202ENSMUST00000201499 651 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Ccdc9Q8VC31 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC7.11□□□□□ -1.27
Ccdc9Q8VC31 Gm36840-201ENSMUST00000202688 250 ntTSL 3 BASIC7.11□□□□□ -1.27
Ccdc9Q8VC31 Gm42963-201ENSMUST00000202943 1217 ntBASIC7.11□□□□□ -1.27
Ccdc9Q8VC31 Gm45185-201ENSMUST00000207556 404 ntBASIC7.11□□□□□ -1.27
Ccdc9Q8VC31 Aldoa-ps4-201ENSMUST00000216332 753 ntBASIC7.11□□□□□ -1.27
Ccdc9Q8VC31 AC172027.1-201ENSMUST00000217659 337 ntBASIC7.11□□□□□ -1.27
Ccdc9Q8VC31 Gm40685-201ENSMUST00000217861 580 ntTSL 3 BASIC7.11□□□□□ -1.27
Ccdc9Q8VC31 Gm6906-201ENSMUST00000218014 569 ntBASIC7.11□□□□□ -1.27
Ccdc9Q8VC31 Gm46203-201ENSMUST00000218130 478 ntBASIC7.11□□□□□ -1.27
Ccdc9Q8VC31 Gm17849-201ENSMUST00000219788 853 ntBASIC7.11□□□□□ -1.27
Ccdc9Q8VC31 1700011B04Rik-205ENSMUST00000220995 831 ntTSL 5 BASIC7.11□□□□□ -1.27
Ccdc9Q8VC31 1700011B04Rik-207ENSMUST00000221256 800 ntTSL 5 BASIC7.11□□□□□ -1.27
Ccdc9Q8VC31 1700011B04Rik-208ENSMUST00000221261 628 ntTSL 5 BASIC7.11□□□□□ -1.27
Ccdc9Q8VC31 1700011B04Rik-210ENSMUST00000222668 821 ntTSL 5 BASIC7.11□□□□□ -1.27
Ccdc9Q8VC31 AC133203.2-201ENSMUST00000226709 464 ntBASIC7.11□□□□□ -1.27
Ccdc9Q8VC31 AC154640.1-202ENSMUST00000227828 496 ntBASIC7.11□□□□□ -1.27
Ccdc9Q8VC31 9530002B09Rik-201ENSMUST00000024032 803 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Ccdc9Q8VC31 Cox20-201ENSMUST00000027781 471 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Ccdc9Q8VC31 Kcne3-201ENSMUST00000049333 1012 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Ccdc9Q8VC31 Zfp865-202ENSMUST00000076791 1129 ntBASIC7.11□□□□□ -1.27
Ccdc9Q8VC31 Trim5-202ENSMUST00000098179 3655 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
Ccdc9Q8VC31 Mndal-202ENSMUST00000186442 1646 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
Ccdc9Q8VC31 Slc22a22-202ENSMUST00000110196 2368 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Ccdc9Q8VC31 Kcnma1-204ENSMUST00000112423 3664 ntTSL 5 BASIC7.11□□□□□ -1.27
Ccdc9Q8VC31 Gm37226-201ENSMUST00000191644 3255 ntBASIC7.1□□□□□ -1.27
Ccdc9Q8VC31 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC7.1□□□□□ -1.27
Ccdc9Q8VC31 Nfia-201ENSMUST00000052018 9249 ntTSL 5 BASIC7.1□□□□□ -1.27
Ccdc9Q8VC31 4932411K12Rik-201ENSMUST00000190493 3156 ntTSL 2 BASIC7.1□□□□□ -1.27
Ccdc9Q8VC31 Abcb5-201ENSMUST00000035515 3876 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Ccdc9Q8VC31 Vmn1r219-202ENSMUST00000226845 5979 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Ccdc9Q8VC31 Vmn1r219-205ENSMUST00000228666 5993 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Ccdc9Q8VC31 Gm7690-201ENSMUST00000190885 1399 ntBASIC7.1□□□□□ -1.27
Ccdc9Q8VC31 Gm37965-201ENSMUST00000195304 1362 ntBASIC7.1□□□□□ -1.27
Ccdc9Q8VC31 Mmp1a-202ENSMUST00000217651 2011 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Ccdc9Q8VC31 Cbx5-201ENSMUST00000108813 3661 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Ccdc9Q8VC31 Gm8979-201ENSMUST00000183386 7296 ntBASIC7.1□□□□□ -1.27
Ccdc9Q8VC31 Clk4-203ENSMUST00000109113 1627 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Ccdc9Q8VC31 Xkr9-201ENSMUST00000088542 1926 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Ccdc9Q8VC31 Olfr20-201ENSMUST00000108465 1061 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Ccdc9Q8VC31 Slamf7-201ENSMUST00000111276 1082 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
Ccdc9Q8VC31 Gm15149-201ENSMUST00000119370 360 ntBASIC7.1□□□□□ -1.27
Ccdc9Q8VC31 Gm13877-201ENSMUST00000120614 417 ntBASIC7.1□□□□□ -1.27
Ccdc9Q8VC31 Gm8089-201ENSMUST00000122463 968 ntBASIC7.1□□□□□ -1.27
Ccdc9Q8VC31 Pramef12os-201ENSMUST00000133334 767 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Ccdc9Q8VC31 Olfr331-202ENSMUST00000170501 957 ntBASIC7.1□□□□□ -1.27
Ccdc9Q8VC31 Gm24103-201ENSMUST00000174930 77 ntBASIC7.1□□□□□ -1.27
Ccdc9Q8VC31 Gm25026-201ENSMUST00000175017 188 ntBASIC7.1□□□□□ -1.27
Ccdc9Q8VC31 Gm20615-201ENSMUST00000177503 705 ntBASIC7.1□□□□□ -1.27
Ccdc9Q8VC31 Gm17048-201ENSMUST00000179266 847 ntBASIC7.1□□□□□ -1.27
Ccdc9Q8VC31 Gm28929-201ENSMUST00000185330 1193 ntBASIC7.1□□□□□ -1.27
Ccdc9Q8VC31 1700122D07Rik-201ENSMUST00000186973 421 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Ccdc9Q8VC31 1700020M21Rik-201ENSMUST00000188320 644 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Ccdc9Q8VC31 Gm9114-201ENSMUST00000188558 997 ntBASIC7.1□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 82.3 ms