Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 4930480G23Rik-201ENSMUST00000125909 1013 ntTSL 5 BASIC6.09□□□□□ -1.43
Clrn1Q8K445 Usp46os1-201ENSMUST00000129275 508 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Clrn1Q8K445 1700019G24Rik-201ENSMUST00000130004 503 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Clrn1Q8K445 2610204G07Rik-201ENSMUST00000131215 992 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Clrn1Q8K445 1700047F07Rik-201ENSMUST00000140321 543 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Clrn1Q8K445 Crem-219ENSMUST00000140332 1015 ntTSL 5 BASIC6.09□□□□□ -1.43
Clrn1Q8K445 Gm13963-201ENSMUST00000143525 892 ntTSL 3 BASIC6.09□□□□□ -1.43
Clrn1Q8K445 Gm13485-201ENSMUST00000146690 659 ntTSL 2 BASIC6.09□□□□□ -1.43
Clrn1Q8K445 Gm22604-201ENSMUST00000157604 311 ntBASIC6.09□□□□□ -1.43
Clrn1Q8K445 Gm6133-201ENSMUST00000164064 948 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Clrn1Q8K445 Gm5283-201ENSMUST00000177874 334 ntBASIC6.09□□□□□ -1.43
Clrn1Q8K445 Gm21045-201ENSMUST00000183058 1020 ntBASIC6.09□□□□□ -1.43
Clrn1Q8K445 Gm29318-201ENSMUST00000185308 975 ntTSL 5 BASIC6.09□□□□□ -1.43
Clrn1Q8K445 1700040F17Rik-201ENSMUST00000187158 817 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Clrn1Q8K445 Gm29534-201ENSMUST00000187328 382 ntBASIC6.09□□□□□ -1.43
Clrn1Q8K445 Gm28817-201ENSMUST00000187598 830 ntTSL 5 BASIC6.09□□□□□ -1.43
Clrn1Q8K445 Gm28639-201ENSMUST00000191519 481 ntBASIC6.09□□□□□ -1.43
Clrn1Q8K445 Gm6680-201ENSMUST00000192789 950 ntBASIC6.09□□□□□ -1.43
Clrn1Q8K445 Gm38084-201ENSMUST00000193488 437 ntTSL 5 BASIC6.09□□□□□ -1.43
Clrn1Q8K445 Gm37865-201ENSMUST00000194996 437 ntTSL 5 BASIC6.09□□□□□ -1.43
Clrn1Q8K445 Gm20128-201ENSMUST00000196189 417 ntBASIC6.09□□□□□ -1.43
Clrn1Q8K445 Gm43120-201ENSMUST00000196228 667 ntTSL 3 BASIC6.09□□□□□ -1.43
Clrn1Q8K445 Gm43098-201ENSMUST00000199989 1297 ntBASIC6.09□□□□□ -1.43
Clrn1Q8K445 Gm43036-201ENSMUST00000200594 373 ntBASIC6.09□□□□□ -1.43
Clrn1Q8K445 1700028E10Rik-206ENSMUST00000202216 557 ntTSL 3 BASIC6.09□□□□□ -1.43
Clrn1Q8K445 Gm44773-201ENSMUST00000207374 557 ntBASIC6.09□□□□□ -1.43
Clrn1Q8K445 Gm2767-201ENSMUST00000209582 473 ntBASIC6.09□□□□□ -1.43
Clrn1Q8K445 AC102312.1-203ENSMUST00000219530 763 ntTSL 2 BASIC6.09□□□□□ -1.43
Clrn1Q8K445 AC130217.2-201ENSMUST00000224009 2990 ntBASIC6.09□□□□□ -1.43
Clrn1Q8K445 AC170086.2-201ENSMUST00000224733 803 ntBASIC6.09□□□□□ -1.43
Clrn1Q8K445 AC154640.3-201ENSMUST00000227492 846 ntBASIC6.09□□□□□ -1.43
Clrn1Q8K445 Crem-202ENSMUST00000049942 953 ntTSL 2 BASIC6.09□□□□□ -1.43
Clrn1Q8K445 Olfr1122-201ENSMUST00000056435 1080 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Clrn1Q8K445 Olfr1487-201ENSMUST00000076856 948 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Clrn1Q8K445 Cryba1-201ENSMUST00000078623 778 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Clrn1Q8K445 Olfr1510-201ENSMUST00000079459 1014 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Clrn1Q8K445 Olfr877-201ENSMUST00000086063 936 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Clrn1Q8K445 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
Clrn1Q8K445 Olfr1100-201ENSMUST00000094913 969 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Clrn1Q8K445 Krtap14-201ENSMUST00000099562 216 ntTSL 5 BASIC6.09□□□□□ -1.43
Clrn1Q8K445 Cox11-202ENSMUST00000099960 773 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
Clrn1Q8K445 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC6.09□□□□□ -1.43
Clrn1Q8K445 Golga1-202ENSMUST00000112850 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Clrn1Q8K445 Gm43528-201ENSMUST00000199492 1674 ntBASIC6.09□□□□□ -1.43
Clrn1Q8K445 Gm42544-201ENSMUST00000197868 3242 ntBASIC6.09□□□□□ -1.43
Clrn1Q8K445 Morc2b-202ENSMUST00000131954 3857 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Clrn1Q8K445 Cyp2j8-201ENSMUST00000124729 1512 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
Clrn1Q8K445 Dnase1l1-202ENSMUST00000075821 1511 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Clrn1Q8K445 Srrm4os-201ENSMUST00000126959 3360 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
Clrn1Q8K445 Matr3-215ENSMUST00000190121 2638 ntTSL 5 BASIC6.09□□□□□ -1.44
Clrn1Q8K445 Adam28-203ENSMUST00000224039 2638 ntAPPRIS ALT2 BASIC6.09□□□□□ -1.44
Clrn1Q8K445 AC166344.3-203ENSMUST00000228117 1466 ntAPPRIS P1 BASIC6.09□□□□□ -1.44
Clrn1Q8K445 Gbp9-201ENSMUST00000031238 4381 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Clrn1Q8K445 Hgf-203ENSMUST00000196645 2189 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Clrn1Q8K445 Pcdh15-211ENSMUST00000126920 6866 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Clrn1Q8K445 4931412I15Rik-201ENSMUST00000207844 1448 ntBASIC6.08□□□□□ -1.44
Clrn1Q8K445 Gm3159-202ENSMUST00000167245 1797 ntAPPRIS P5 TSL 5 BASIC6.08□□□□□ -1.44
Clrn1Q8K445 Olfr398-203ENSMUST00000214334 5348 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Clrn1Q8K445 Gm5546-201ENSMUST00000056145 2777 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Clrn1Q8K445 Bbs12-201ENSMUST00000057975 2433 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
Clrn1Q8K445 Rfc1-206ENSMUST00000204965 4751 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
Clrn1Q8K445 Gm44046-201ENSMUST00000203145 2678 ntBASIC6.08□□□□□ -1.44
Clrn1Q8K445 Gm44667-201ENSMUST00000207632 3337 ntBASIC6.08□□□□□ -1.44
Clrn1Q8K445 Bivm-201ENSMUST00000035991 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Clrn1Q8K445 Gm7680-201ENSMUST00000216198 1348 ntBASIC6.08□□□□□ -1.44
Clrn1Q8K445 Gm15950-201ENSMUST00000162902 1973 ntBASIC6.08□□□□□ -1.44
Clrn1Q8K445 Pigc-202ENSMUST00000111594 3290 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Clrn1Q8K445 Slc6a20a-203ENSMUST00000171647 3894 ntTSL 5 BASIC6.08□□□□□ -1.44
Clrn1Q8K445 BC067074-201ENSMUST00000078163 3546 ntTSL 5 BASIC6.08□□□□□ -1.44
Clrn1Q8K445 Olfr193-203ENSMUST00000208455 2855 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
Clrn1Q8K445 Olfr1181-202ENSMUST00000102619 1240 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
Clrn1Q8K445 Gm23979-201ENSMUST00000104071 128 ntBASIC6.08□□□□□ -1.44
Clrn1Q8K445 Gm11393-201ENSMUST00000118019 288 ntBASIC6.08□□□□□ -1.44
Clrn1Q8K445 Olfr595-ps1-201ENSMUST00000118180 954 ntBASIC6.08□□□□□ -1.44
Clrn1Q8K445 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC6.08□□□□□ -1.44
Clrn1Q8K445 Gm15750-201ENSMUST00000120970 616 ntBASIC6.08□□□□□ -1.44
Clrn1Q8K445 Gm15656-201ENSMUST00000132076 615 ntTSL 3 BASIC6.08□□□□□ -1.44
Clrn1Q8K445 Gm15122-201ENSMUST00000135434 462 ntTSL 2 BASIC6.08□□□□□ -1.44
Clrn1Q8K445 Gm13330-201ENSMUST00000136400 388 ntTSL 5 BASIC6.08□□□□□ -1.44
Clrn1Q8K445 Gm14710-201ENSMUST00000146082 1066 ntBASIC6.08□□□□□ -1.44
Clrn1Q8K445 Gm25669-201ENSMUST00000157699 112 ntBASIC6.08□□□□□ -1.44
Clrn1Q8K445 Vmn2r-ps85-201ENSMUST00000174022 940 ntBASIC6.08□□□□□ -1.44
Clrn1Q8K445 Gm25675-201ENSMUST00000174979 118 ntBASIC6.08□□□□□ -1.44
Clrn1Q8K445 Gm23945-201ENSMUST00000179609 92 ntBASIC6.08□□□□□ -1.44
Clrn1Q8K445 Rpl9-ps1-202ENSMUST00000182502 576 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Clrn1Q8K445 Gm9541-201ENSMUST00000188409 502 ntBASIC6.08□□□□□ -1.44
Clrn1Q8K445 Gm6445-201ENSMUST00000189515 1112 ntBASIC6.08□□□□□ -1.44
Clrn1Q8K445 Gm2229-201ENSMUST00000193328 710 ntBASIC6.08□□□□□ -1.44
Clrn1Q8K445 Gm29784-201ENSMUST00000196217 406 ntBASIC6.08□□□□□ -1.44
Clrn1Q8K445 Gm44300-201ENSMUST00000196792 121 ntBASIC6.08□□□□□ -1.44
Clrn1Q8K445 Gm5853-201ENSMUST00000197183 632 ntBASIC6.08□□□□□ -1.44
Clrn1Q8K445 Gm43464-201ENSMUST00000198003 317 ntTSL 3 BASIC6.08□□□□□ -1.44
Clrn1Q8K445 Rpl9-ps8-201ENSMUST00000198343 562 ntBASIC6.08□□□□□ -1.44
Clrn1Q8K445 Gm44212-201ENSMUST00000205016 897 ntBASIC6.08□□□□□ -1.44
Clrn1Q8K445 Gm45024-201ENSMUST00000208274 623 ntTSL 3 BASIC6.08□□□□□ -1.44
Clrn1Q8K445 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC6.08□□□□□ -1.44
Clrn1Q8K445 4930567H12Rik-201ENSMUST00000212260 955 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Clrn1Q8K445 Gm33838-201ENSMUST00000214038 786 ntTSL 5 BASIC6.08□□□□□ -1.44
Clrn1Q8K445 AC164424.1-201ENSMUST00000221690 170 ntBASIC6.08□□□□□ -1.44
Clrn1Q8K445 Gm5928-201ENSMUST00000221839 466 ntBASIC6.08□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms