Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ccdc28bQ8CEG5 Siae-201ENSMUST00000002007 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ccdc28bQ8CEG5 Olfr738-203ENSMUST00000214853 2046 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Ccdc28bQ8CEG5 Trim2-204ENSMUST00000107692 7161 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ccdc28bQ8CEG5 A530076I17Rik-202ENSMUST00000228352 1524 ntBASIC5.79□□□□□ -1.48
Ccdc28bQ8CEG5 Heph-202ENSMUST00000079322 3904 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Ccdc28bQ8CEG5 Smarca2-203ENSMUST00000112637 1962 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Ccdc28bQ8CEG5 Tcerg1-201ENSMUST00000025375 4152 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ccdc28bQ8CEG5 Olfr1173-201ENSMUST00000099830 2268 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Ccdc28bQ8CEG5 Cse1l-210ENSMUST00000168599 2748 ntTSL 5 BASIC5.78□□□□□ -1.48
Ccdc28bQ8CEG5 Gm10352-201ENSMUST00000166474 1482 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Ccdc28bQ8CEG5 Dclre1a-204ENSMUST00000182276 4066 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ccdc28bQ8CEG5 Scn9a-206ENSMUST00000164384 7530 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
Ccdc28bQ8CEG5 Ptprj-202ENSMUST00000111495 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ccdc28bQ8CEG5 Mir546-201ENSMUST00000102105 121 ntBASIC5.78□□□□□ -1.48
Ccdc28bQ8CEG5 Gm4070-201ENSMUST00000106766 8795 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ccdc28bQ8CEG5 Izumo3-201ENSMUST00000107108 1252 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ccdc28bQ8CEG5 Gm11799-201ENSMUST00000116110 460 ntBASIC5.78□□□□□ -1.48
Ccdc28bQ8CEG5 Gm12641-201ENSMUST00000117874 985 ntBASIC5.78□□□□□ -1.48
Ccdc28bQ8CEG5 Gm15715-201ENSMUST00000118032 283 ntBASIC5.78□□□□□ -1.48
Ccdc28bQ8CEG5 Gm12308-201ENSMUST00000120440 389 ntBASIC5.78□□□□□ -1.48
Ccdc28bQ8CEG5 Gm12400-201ENSMUST00000120915 1003 ntBASIC5.78□□□□□ -1.48
Ccdc28bQ8CEG5 Gm14847-201ENSMUST00000121978 519 ntBASIC5.78□□□□□ -1.48
Ccdc28bQ8CEG5 Gm16208-201ENSMUST00000128476 471 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Ccdc28bQ8CEG5 Gm15691-201ENSMUST00000138626 849 ntTSL 3 BASIC5.78□□□□□ -1.48
Ccdc28bQ8CEG5 Gm15809-201ENSMUST00000159361 661 ntTSL 5 BASIC5.78□□□□□ -1.48
Ccdc28bQ8CEG5 Gm8550-201ENSMUST00000161621 653 ntBASIC5.78□□□□□ -1.48
Ccdc28bQ8CEG5 Gm10087-201ENSMUST00000167650 330 ntBASIC5.78□□□□□ -1.48
Ccdc28bQ8CEG5 9330159M07Rik-203ENSMUST00000181448 602 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Ccdc28bQ8CEG5 Gm37439-201ENSMUST00000193150 856 ntBASIC5.78□□□□□ -1.48
Ccdc28bQ8CEG5 Gm38360-201ENSMUST00000195130 454 ntBASIC5.78□□□□□ -1.48
Ccdc28bQ8CEG5 4930568G15Rik-202ENSMUST00000195635 996 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Ccdc28bQ8CEG5 Gm34333-201ENSMUST00000200363 669 ntTSL 3 BASIC5.78□□□□□ -1.48
Ccdc28bQ8CEG5 Tas2r111-ps2-201ENSMUST00000203794 901 ntBASIC5.78□□□□□ -1.48
Ccdc28bQ8CEG5 Gm18689-201ENSMUST00000203969 902 ntBASIC5.78□□□□□ -1.48
Ccdc28bQ8CEG5 Gm45870-201ENSMUST00000211269 601 ntBASIC5.78□□□□□ -1.48
Ccdc28bQ8CEG5 Gm45750-201ENSMUST00000211966 354 ntBASIC5.78□□□□□ -1.48
Ccdc28bQ8CEG5 4930567H12Rik-201ENSMUST00000212260 955 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Ccdc28bQ8CEG5 Gm8863-201ENSMUST00000216630 926 ntBASIC5.78□□□□□ -1.48
Ccdc28bQ8CEG5 4930519F16Rik-201ENSMUST00000033688 1113 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Ccdc28bQ8CEG5 Vmn1r89-201ENSMUST00000053008 951 ntAPPRIS P2 BASIC5.78□□□□□ -1.48
Ccdc28bQ8CEG5 Olfr684-201ENSMUST00000060893 939 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Ccdc28bQ8CEG5 Gvin1-201ENSMUST00000006667 8795 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ccdc28bQ8CEG5 Gm23624-201ENSMUST00000082463 321 ntBASIC5.78□□□□□ -1.48
Ccdc28bQ8CEG5 Lgi1-207ENSMUST00000198518 7780 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ccdc28bQ8CEG5 Gm16794-201ENSMUST00000180727 2100 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Ccdc28bQ8CEG5 Tnrc6b-201ENSMUST00000067689 17332 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Ccdc28bQ8CEG5 1700022I11Rik-201ENSMUST00000030163 3727 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ccdc28bQ8CEG5 Gm9521-201ENSMUST00000206656 1516 ntBASIC5.78□□□□□ -1.48
Ccdc28bQ8CEG5 Aspa-201ENSMUST00000021119 1530 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ccdc28bQ8CEG5 Anapc10-201ENSMUST00000048147 2801 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ccdc28bQ8CEG5 Naip6-202ENSMUST00000118574 6827 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ccdc28bQ8CEG5 Elmod1-202ENSMUST00000166580 2243 ntAPPRIS ALT1 TSL 5 BASIC5.78□□□□□ -1.48
Ccdc28bQ8CEG5 Olfr633-202ENSMUST00000216006 3915 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Ccdc28bQ8CEG5 Gm37482-201ENSMUST00000194899 2791 ntBASIC5.78□□□□□ -1.48
Ccdc28bQ8CEG5 Vmn1r235-201ENSMUST00000060603 1781 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ccdc28bQ8CEG5 Hgf-201ENSMUST00000030683 2642 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ccdc28bQ8CEG5 Vps13d-201ENSMUST00000020441 15665 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
Ccdc28bQ8CEG5 Nme7-202ENSMUST00000191947 1635 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.48
Ccdc28bQ8CEG5 1810046K07Rik-201ENSMUST00000039959 1318 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ccdc28bQ8CEG5 AC156031.1-201ENSMUST00000217288 2555 ntBASIC5.77□□□□□ -1.49
Ccdc28bQ8CEG5 Gm37606-201ENSMUST00000191816 3116 ntBASIC5.77□□□□□ -1.49
Ccdc28bQ8CEG5 Gm37780-201ENSMUST00000194117 1873 ntBASIC5.77□□□□□ -1.49
Ccdc28bQ8CEG5 Mmp13-201ENSMUST00000015394 2673 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ccdc28bQ8CEG5 Fbxl13-201ENSMUST00000051358 2531 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ccdc28bQ8CEG5 Dhrs9-201ENSMUST00000063690 4281 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ccdc28bQ8CEG5 Olfr390-204ENSMUST00000215161 3740 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Ccdc28bQ8CEG5 Nlrp9a-203ENSMUST00000117252 2796 ntTSL 2 BASIC5.77□□□□□ -1.49
Ccdc28bQ8CEG5 Xpo1-204ENSMUST00000109551 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ccdc28bQ8CEG5 Bclaf1-202ENSMUST00000092678 5307 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ccdc28bQ8CEG5 Trbv23-201ENSMUST00000103279 344 ntAPPRIS ALT2 BASIC5.77□□□□□ -1.49
Ccdc28bQ8CEG5 Igkv5-43-201ENSMUST00000103368 379 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Ccdc28bQ8CEG5 Gm22714-201ENSMUST00000116894 78 ntBASIC5.77□□□□□ -1.49
Ccdc28bQ8CEG5 Gm14065-201ENSMUST00000120848 585 ntBASIC5.77□□□□□ -1.49
Ccdc28bQ8CEG5 Gm12396-201ENSMUST00000121600 306 ntBASIC5.77□□□□□ -1.49
Ccdc28bQ8CEG5 Gm7613-201ENSMUST00000139070 487 ntBASIC5.77□□□□□ -1.49
Ccdc28bQ8CEG5 1700047F07Rik-201ENSMUST00000140321 543 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Ccdc28bQ8CEG5 Ctcflos-202ENSMUST00000142207 918 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Ccdc28bQ8CEG5 Gm14637-201ENSMUST00000156516 444 ntTSL 2 BASIC5.77□□□□□ -1.49
Ccdc28bQ8CEG5 Gm22852-201ENSMUST00000177899 101 ntBASIC5.77□□□□□ -1.49
Ccdc28bQ8CEG5 Gm4832-202ENSMUST00000183295 375 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Ccdc28bQ8CEG5 Scgb1b16-ps-201ENSMUST00000186029 275 ntBASIC5.77□□□□□ -1.49
Ccdc28bQ8CEG5 Scgb1b14-ps-201ENSMUST00000188286 275 ntBASIC5.77□□□□□ -1.49
Ccdc28bQ8CEG5 Gm6119-201ENSMUST00000193443 1206 ntBASIC5.77□□□□□ -1.49
Ccdc28bQ8CEG5 Gm29678-201ENSMUST00000193966 1134 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Ccdc28bQ8CEG5 Ighv8-2-201ENSMUST00000195037 359 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Ccdc28bQ8CEG5 1700013A02Rik-201ENSMUST00000202969 645 ntBASIC5.77□□□□□ -1.49
Ccdc28bQ8CEG5 Olrf445-ps1-201ENSMUST00000204960 314 ntBASIC5.77□□□□□ -1.49
Ccdc28bQ8CEG5 Olfr162-ps1-201ENSMUST00000206015 934 ntBASIC5.77□□□□□ -1.49
Ccdc28bQ8CEG5 Gm45276-201ENSMUST00000209549 1086 ntBASIC5.77□□□□□ -1.49
Ccdc28bQ8CEG5 Gm35521-201ENSMUST00000211285 440 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Ccdc28bQ8CEG5 AC147782.1-201ENSMUST00000219169 475 ntBASIC5.77□□□□□ -1.49
Ccdc28bQ8CEG5 AC124732.4-201ENSMUST00000220930 1274 ntBASIC5.77□□□□□ -1.49
Ccdc28bQ8CEG5 CT009764.1-201ENSMUST00000222260 483 ntBASIC5.77□□□□□ -1.49
Ccdc28bQ8CEG5 AC139197.1-201ENSMUST00000228332 813 ntBASIC5.77□□□□□ -1.49
Ccdc28bQ8CEG5 Fam229b-201ENSMUST00000063204 745 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ccdc28bQ8CEG5 Zfp605-201ENSMUST00000086686 2085 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
Ccdc28bQ8CEG5 Dach2-204ENSMUST00000113380 2894 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Ccdc28bQ8CEG5 Olfr221-205ENSMUST00000216907 2859 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Ccdc28bQ8CEG5 Olfr906-202ENSMUST00000214344 3775 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 104.5 ms