Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Ppp1r1c-202ENSMUST00000090760 2644 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Col6a6Q8C6K9 AC134577.3-201ENSMUST00000226490 3000 ntBASIC5.27□□□□□ -1.57
Col6a6Q8C6K9 Gm29660-201ENSMUST00000185631 2166 ntTSL 5 BASIC5.27□□□□□ -1.57
Col6a6Q8C6K9 Gm29309-201ENSMUST00000186251 2166 ntTSL 5 BASIC5.27□□□□□ -1.57
Col6a6Q8C6K9 Gm29379-201ENSMUST00000186305 2166 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Col6a6Q8C6K9 Gm28547-201ENSMUST00000186357 2167 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Col6a6Q8C6K9 Gm28157-201ENSMUST00000187675 2165 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Col6a6Q8C6K9 Gm28276-201ENSMUST00000188508 2166 ntTSL 5 BASIC5.27□□□□□ -1.57
Col6a6Q8C6K9 Gm29146-201ENSMUST00000188904 2165 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Col6a6Q8C6K9 Gm28772-201ENSMUST00000189554 2165 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Col6a6Q8C6K9 Gm28201-201ENSMUST00000189989 2166 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Col6a6Q8C6K9 Gm29632-201ENSMUST00000190335 2166 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Col6a6Q8C6K9 Gm28538-201ENSMUST00000190919 2166 ntTSL 5 BASIC5.27□□□□□ -1.57
Col6a6Q8C6K9 Gm38209-201ENSMUST00000192711 2169 ntTSL 5 BASIC5.27□□□□□ -1.57
Col6a6Q8C6K9 Gm37547-201ENSMUST00000193277 2165 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Col6a6Q8C6K9 Gm37937-201ENSMUST00000194130 2168 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Col6a6Q8C6K9 Gm37263-201ENSMUST00000195837 2169 ntTSL 5 BASIC5.27□□□□□ -1.57
Col6a6Q8C6K9 Mrps25-203ENSMUST00000140438 6073 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Col6a6Q8C6K9 Gm42892-201ENSMUST00000196227 3973 ntBASIC5.27□□□□□ -1.57
Col6a6Q8C6K9 Gm44255-201ENSMUST00000203456 2053 ntBASIC5.27□□□□□ -1.57
Col6a6Q8C6K9 Rsrc2-210ENSMUST00000182489 1665 ntTSL 5 BASIC5.27□□□□□ -1.57
Col6a6Q8C6K9 Gm15044-201ENSMUST00000120703 598 ntBASIC5.27□□□□□ -1.57
Col6a6Q8C6K9 Gm11805-201ENSMUST00000121238 600 ntBASIC5.27□□□□□ -1.57
Col6a6Q8C6K9 1700026D11Rik-203ENSMUST00000144501 535 ntTSL 3 BASIC5.27□□□□□ -1.57
Col6a6Q8C6K9 Gm23553-201ENSMUST00000157817 295 ntBASIC5.27□□□□□ -1.57
Col6a6Q8C6K9 Gm8185-201ENSMUST00000160999 669 ntBASIC5.27□□□□□ -1.57
Col6a6Q8C6K9 Gm28429-201ENSMUST00000188521 363 ntBASIC5.27□□□□□ -1.57
Col6a6Q8C6K9 4933436F18Rik-201ENSMUST00000193468 802 ntBASIC5.27□□□□□ -1.57
Col6a6Q8C6K9 Gm42663-201ENSMUST00000199883 351 ntBASIC5.27□□□□□ -1.57
Col6a6Q8C6K9 Gm15754-202ENSMUST00000202846 758 ntTSL 3 BASIC5.27□□□□□ -1.57
Col6a6Q8C6K9 Supt4b-201ENSMUST00000214434 351 ntBASIC5.27□□□□□ -1.57
Col6a6Q8C6K9 4930486F22Rik-201ENSMUST00000218077 559 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Col6a6Q8C6K9 Psd3-206ENSMUST00000120071 9203 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Col6a6Q8C6K9 Specc1-201ENSMUST00000049836 6091 ntTSL 5 BASIC5.27□□□□□ -1.57
Col6a6Q8C6K9 Nckap5-201ENSMUST00000057846 5334 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
Col6a6Q8C6K9 Gm232-201ENSMUST00000216549 2559 ntBASIC5.27□□□□□ -1.57
Col6a6Q8C6K9 Tor1aip2-203ENSMUST00000097526 2589 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Col6a6Q8C6K9 Ugt2b37-201ENSMUST00000075858 1894 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Col6a6Q8C6K9 Mmp12-203ENSMUST00000120655 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
Col6a6Q8C6K9 Fmo9-201ENSMUST00000027843 3065 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Col6a6Q8C6K9 Gm45117-201ENSMUST00000207250 1774 ntBASIC5.27□□□□□ -1.57
Col6a6Q8C6K9 AC154903.1-201ENSMUST00000222121 2705 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Col6a6Q8C6K9 Ehf-203ENSMUST00000111176 3696 ntTSL 5 BASIC5.27□□□□□ -1.57
Col6a6Q8C6K9 Olfr678-202ENSMUST00000213622 2369 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Col6a6Q8C6K9 C230038L03Rik-201ENSMUST00000129409 2632 ntTSL 2 BASIC5.26□□□□□ -1.57
Col6a6Q8C6K9 Olfr1391-202ENSMUST00000215671 3235 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Col6a6Q8C6K9 Gm38082-201ENSMUST00000192800 6882 ntBASIC5.26□□□□□ -1.57
Col6a6Q8C6K9 Pik3ca-202ENSMUST00000108242 6171 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Col6a6Q8C6K9 Gm4841-201ENSMUST00000090260 2838 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
Col6a6Q8C6K9 4931406B18Rik-201ENSMUST00000013497 3970 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Col6a6Q8C6K9 Olfr710-201ENSMUST00000055923 1312 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Col6a6Q8C6K9 Zfp473-202ENSMUST00000118162 3091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Col6a6Q8C6K9 Tcerg1-201ENSMUST00000025375 4152 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Col6a6Q8C6K9 Vmn1r196-202ENSMUST00000226245 5312 ntAPPRIS ALT2 BASIC5.26□□□□□ -1.57
Col6a6Q8C6K9 Prl2b1-202ENSMUST00000102954 870 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
Col6a6Q8C6K9 Gm12336-201ENSMUST00000125962 322 ntTSL 3 BASIC5.26□□□□□ -1.57
Col6a6Q8C6K9 Gm12655-202ENSMUST00000133884 925 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Col6a6Q8C6K9 Gm9499-201ENSMUST00000180888 964 ntBASIC5.26□□□□□ -1.57
Col6a6Q8C6K9 Gm28188-201ENSMUST00000190483 236 ntBASIC5.26□□□□□ -1.57
Col6a6Q8C6K9 Gm7733-201ENSMUST00000199038 919 ntBASIC5.26□□□□□ -1.57
Col6a6Q8C6K9 Gm32754-201ENSMUST00000199442 257 ntTSL 5 BASIC5.26□□□□□ -1.57
Col6a6Q8C6K9 Gm44516-201ENSMUST00000208794 833 ntTSL 5 BASIC5.26□□□□□ -1.57
Col6a6Q8C6K9 Ifitm6-203ENSMUST00000211330 813 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
Col6a6Q8C6K9 Gm20786-201ENSMUST00000212649 436 ntBASIC5.26□□□□□ -1.57
Col6a6Q8C6K9 AC124408.2-201ENSMUST00000228168 645 ntBASIC5.26□□□□□ -1.57
Col6a6Q8C6K9 Olfr577-201ENSMUST00000051505 939 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Col6a6Q8C6K9 Gm43728-201ENSMUST00000198817 2622 ntBASIC5.26□□□□□ -1.57
Col6a6Q8C6K9 AC122346.1-201ENSMUST00000225266 3732 ntBASIC5.26□□□□□ -1.57
Col6a6Q8C6K9 Vmn1r81-202ENSMUST00000227080 13256 ntAPPRIS ALT2 BASIC5.26□□□□□ -1.57
Col6a6Q8C6K9 Adgrv1-202ENSMUST00000109565 7094 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Col6a6Q8C6K9 Olfr122-202ENSMUST00000172582 1620 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
Col6a6Q8C6K9 Gm5868-201ENSMUST00000031124 1382 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Col6a6Q8C6K9 Hyal5-202ENSMUST00000200968 2070 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Col6a6Q8C6K9 Gm3453-201ENSMUST00000170686 1756 ntAPPRIS P5 TSL 5 BASIC5.26□□□□□ -1.57
Col6a6Q8C6K9 Vmn1r37-204ENSMUST00000226974 1770 ntAPPRIS P2 BASIC5.26□□□□□ -1.57
Col6a6Q8C6K9 Gm22710-201ENSMUST00000116892 125 ntBASIC5.26□□□□□ -1.57
Col6a6Q8C6K9 Gm15120-201ENSMUST00000120602 301 ntBASIC5.26□□□□□ -1.57
Col6a6Q8C6K9 0610043K17Rik-201ENSMUST00000123107 614 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Col6a6Q8C6K9 Gm12122-201ENSMUST00000124503 454 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Col6a6Q8C6K9 Gm16028-201ENSMUST00000162347 890 ntTSL 5 BASIC5.26□□□□□ -1.57
Col6a6Q8C6K9 1110032A03Rik-209ENSMUST00000177546 647 ntTSL 3 BASIC5.26□□□□□ -1.57
Col6a6Q8C6K9 Mir7031-201ENSMUST00000183860 65 ntBASIC5.26□□□□□ -1.57
Col6a6Q8C6K9 Gm28066-201ENSMUST00000188657 472 ntBASIC5.26□□□□□ -1.57
Col6a6Q8C6K9 Gm18800-202ENSMUST00000188688 1105 ntBASIC5.26□□□□□ -1.57
Col6a6Q8C6K9 Ighv5-21-201ENSMUST00000191935 295 ntBASIC5.26□□□□□ -1.57
Col6a6Q8C6K9 Gm37308-201ENSMUST00000194684 100 ntBASIC5.26□□□□□ -1.57
Col6a6Q8C6K9 4930590L14Rik-201ENSMUST00000196030 836 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Col6a6Q8C6K9 Gm44316-201ENSMUST00000199274 97 ntBASIC5.26□□□□□ -1.57
Col6a6Q8C6K9 Rrh-208ENSMUST00000200079 1106 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Col6a6Q8C6K9 Gm32158-201ENSMUST00000200135 404 ntBASIC5.26□□□□□ -1.57
Col6a6Q8C6K9 Gm34549-202ENSMUST00000207356 970 ntTSL 5 BASIC5.26□□□□□ -1.57
Col6a6Q8C6K9 Gm45908-201ENSMUST00000212977 1177 ntBASIC5.26□□□□□ -1.57
Col6a6Q8C6K9 Gm45777-201ENSMUST00000213009 301 ntBASIC5.26□□□□□ -1.57
Col6a6Q8C6K9 Ceacam12-201ENSMUST00000032520 1056 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
Col6a6Q8C6K9 n-R5s180-201ENSMUST00000082770 106 ntBASIC5.26□□□□□ -1.57
Col6a6Q8C6K9 Mmp20-201ENSMUST00000034487 3287 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Col6a6Q8C6K9 P2ry13-201ENSMUST00000040622 2528 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Col6a6Q8C6K9 Zfp799-205ENSMUST00000202988 6012 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Col6a6Q8C6K9 Olfr1532-ps1-202ENSMUST00000207492 2414 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
Col6a6Q8C6K9 AC126549.1-201ENSMUST00000225044 3687 ntBASIC5.25□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms