Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 3830406C13Rik-202ENSMUST00000163392 2452 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trim35Q8C006 Slc15a5-206ENSMUST00000171804 2461 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Trim35Q8C006 BC106179-201ENSMUST00000055369 4128 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trim35Q8C006 Olfr1155-203ENSMUST00000215903 2122 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Trim35Q8C006 Foxp3-203ENSMUST00000115739 3739 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trim35Q8C006 Gja1-201ENSMUST00000068581 3071 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trim35Q8C006 Zfp69-202ENSMUST00000106281 1764 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trim35Q8C006 Tctex1d1-202ENSMUST00000116317 1772 ntAPPRIS P3 TSL 5 BASIC8.89□□□□□ -0.99
Trim35Q8C006 Polr3a-201ENSMUST00000026322 4687 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trim35Q8C006 Rasgef1c-201ENSMUST00000063444 3378 ntAPPRIS ALT1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trim35Q8C006 Amot-201ENSMUST00000112835 6519 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
Trim35Q8C006 Jade1-206ENSMUST00000191952 3327 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Trim35Q8C006 Arpp21-201ENSMUST00000035085 3254 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Trim35Q8C006 Gramd1c-204ENSMUST00000214098 2046 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Trim35Q8C006 Cyp2j9-201ENSMUST00000055693 2037 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trim35Q8C006 Sncaip-202ENSMUST00000115410 3585 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trim35Q8C006 Gm15169-202ENSMUST00000130794 2335 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Trim35Q8C006 Mas1-209ENSMUST00000167152 1670 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Trim35Q8C006 Pde6h-202ENSMUST00000137768 5940 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trim35Q8C006 Dpf3-207ENSMUST00000178756 3135 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trim35Q8C006 Cir1-201ENSMUST00000058615 2821 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trim35Q8C006 Btbd35f15-201ENSMUST00000186329 1917 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
Trim35Q8C006 Gm37702-201ENSMUST00000194357 1872 ntBASIC8.88□□□□□ -0.99
Trim35Q8C006 Gm43154-206ENSMUST00000209562 1884 ntTSL 5 BASIC8.88□□□□□ -0.99
Trim35Q8C006 Add1-201ENSMUST00000001108 3898 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trim35Q8C006 Zfp708-201ENSMUST00000109742 2416 ntAPPRIS P2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trim35Q8C006 Zfp708-203ENSMUST00000190566 2406 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Trim35Q8C006 Gm24935-201ENSMUST00000103770 110 ntBASIC8.88□□□□□ -0.99
Trim35Q8C006 Gm24124-201ENSMUST00000104103 132 ntBASIC8.88□□□□□ -0.99
Trim35Q8C006 Ccdc141-203ENSMUST00000111833 631 ntTSL 2 BASIC8.88□□□□□ -0.99
Trim35Q8C006 Hikeshi-203ENSMUST00000117354 297 ntTSL 2 BASIC8.88□□□□□ -0.99
Trim35Q8C006 Gm14815-201ENSMUST00000120060 488 ntBASIC8.88□□□□□ -0.99
Trim35Q8C006 Gm15213-201ENSMUST00000122098 216 ntBASIC8.88□□□□□ -0.99
Trim35Q8C006 Gm25844-201ENSMUST00000122587 309 ntBASIC8.88□□□□□ -0.99
Trim35Q8C006 Gm16301-201ENSMUST00000161959 295 ntBASIC8.88□□□□□ -0.99
Trim35Q8C006 Gm17183-201ENSMUST00000171170 493 ntBASIC8.88□□□□□ -0.99
Trim35Q8C006 Isx-202ENSMUST00000174427 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trim35Q8C006 Gm21834-201ENSMUST00000178907 453 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
Trim35Q8C006 Gm4891-201ENSMUST00000182279 912 ntBASIC8.88□□□□□ -0.99
Trim35Q8C006 Gm28847-201ENSMUST00000186778 700 ntBASIC8.88□□□□□ -0.99
Trim35Q8C006 1700120C14Rik-201ENSMUST00000187706 326 ntTSL 2 BASIC8.88□□□□□ -0.99
Trim35Q8C006 Gm19843-201ENSMUST00000198144 772 ntBASIC8.88□□□□□ -0.99
Trim35Q8C006 Gm42543-201ENSMUST00000198756 353 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
Trim35Q8C006 AC121821.1-201ENSMUST00000199921 111 ntBASIC8.88□□□□□ -0.99
Trim35Q8C006 Gm31305-202ENSMUST00000200435 761 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Trim35Q8C006 Ighv1-86-201ENSMUST00000200562 353 ntBASIC8.88□□□□□ -0.99
Trim35Q8C006 Tpi-rs11-201ENSMUST00000202145 310 ntBASIC8.88□□□□□ -0.99
Trim35Q8C006 Gm44033-201ENSMUST00000203699 695 ntBASIC8.88□□□□□ -0.99
Trim35Q8C006 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC8.88□□□□□ -0.99
Trim35Q8C006 Gm45554-203ENSMUST00000211410 2137 ntTSL 5 BASIC8.88□□□□□ -0.99
Trim35Q8C006 AC192434.1-201ENSMUST00000225464 390 ntBASIC8.88□□□□□ -0.99
Trim35Q8C006 AC124182.1-201ENSMUST00000227091 321 ntBASIC8.88□□□□□ -0.99
Trim35Q8C006 Lcn12-201ENSMUST00000028312 716 ntAPPRIS P2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trim35Q8C006 Smim7-201ENSMUST00000058733 642 ntTSL 2 BASIC8.88□□□□□ -0.99
Trim35Q8C006 Krtap10-4-201ENSMUST00000092369 981 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
Trim35Q8C006 Gm16261-201ENSMUST00000096813 205 ntBASIC8.88□□□□□ -0.99
Trim35Q8C006 Olfr825-203ENSMUST00000216530 3502 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Trim35Q8C006 Prkcz-202ENSMUST00000103178 4083 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Trim35Q8C006 Gm35608-201ENSMUST00000218472 2370 ntBASIC8.88□□□□□ -0.99
Trim35Q8C006 Zfp260-201ENSMUST00000050735 4006 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trim35Q8C006 Olfr374-202ENSMUST00000210435 8718 ntAPPRIS P1 TSL 2 BASIC8.88□□□□□ -0.99
Trim35Q8C006 Gm42944-201ENSMUST00000198383 3980 ntBASIC8.88□□□□□ -0.99
Trim35Q8C006 B230323A14Rik-201ENSMUST00000180488 2864 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Trim35Q8C006 Gm3453-201ENSMUST00000170686 1756 ntAPPRIS P5 TSL 5 BASIC8.88□□□□□ -0.99
Trim35Q8C006 Ralgapa1-212ENSMUST00000226244 8841 ntBASIC8.88□□□□□ -0.99
Trim35Q8C006 Gm4349-201ENSMUST00000181809 2559 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Trim35Q8C006 Mybpc2-201ENSMUST00000165208 3611 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trim35Q8C006 Clec2g-201ENSMUST00000000254 2463 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trim35Q8C006 Dlgap5-201ENSMUST00000043296 2964 ntAPPRIS P2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Trim35Q8C006 Camk2a-201ENSMUST00000025519 3244 ntTSL 5 BASIC8.88□□□□□ -0.99
Trim35Q8C006 Ctnnd1-213ENSMUST00000111687 6030 ntTSL 5 BASIC8.88□□□□□ -0.99
Trim35Q8C006 Hp1bp3-203ENSMUST00000105825 4618 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
Trim35Q8C006 Gm42744-201ENSMUST00000196517 2147 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Trim35Q8C006 Gm43886-201ENSMUST00000205039 2386 ntBASIC8.87□□□□□ -0.99
Trim35Q8C006 Gm45289-201ENSMUST00000211048 2577 ntBASIC8.87□□□□□ -0.99
Trim35Q8C006 Scg2-202ENSMUST00000185234 2317 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Trim35Q8C006 Rbm6-ps2-201ENSMUST00000186440 1534 ntBASIC8.87□□□□□ -0.99
Trim35Q8C006 Chrdl2-201ENSMUST00000032977 1520 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trim35Q8C006 Bbx-208ENSMUST00000138166 8743 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trim35Q8C006 G430049J08Rik-201ENSMUST00000179907 2686 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Trim35Q8C006 Gys2-201ENSMUST00000032371 2657 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trim35Q8C006 Tmx2-201ENSMUST00000053664 1977 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Trim35Q8C006 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Trim35Q8C006 Trav13n-4-201ENSMUST00000103634 267 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Trim35Q8C006 Rab3b-203ENSMUST00000106651 1078 ntTSL 5 BASIC8.87□□□□□ -0.99
Trim35Q8C006 Gm13311-201ENSMUST00000117863 379 ntBASIC8.87□□□□□ -0.99
Trim35Q8C006 Rpl7l1-ps1-201ENSMUST00000118822 725 ntBASIC8.87□□□□□ -0.99
Trim35Q8C006 Gm13578-201ENSMUST00000120849 590 ntBASIC8.87□□□□□ -0.99
Trim35Q8C006 Gm14038-201ENSMUST00000121500 807 ntBASIC8.87□□□□□ -0.99
Trim35Q8C006 Gm15237-201ENSMUST00000122104 469 ntBASIC8.87□□□□□ -0.99
Trim35Q8C006 4933407L21Rik-202ENSMUST00000129392 503 ntAPPRIS ALT2 TSL 3 BASIC8.87□□□□□ -0.99
Trim35Q8C006 Gm16052-201ENSMUST00000129681 505 ntTSL 2 BASIC8.87□□□□□ -0.99
Trim35Q8C006 4933431E20Rik-205ENSMUST00000137970 795 ntTSL 3 BASIC8.87□□□□□ -0.99
Trim35Q8C006 Gm15471-201ENSMUST00000145893 625 ntTSL 2 BASIC8.87□□□□□ -0.99
Trim35Q8C006 Gm12305-201ENSMUST00000151817 407 ntTSL 2 BASIC8.87□□□□□ -0.99
Trim35Q8C006 Gm25390-201ENSMUST00000157341 103 ntBASIC8.87□□□□□ -0.99
Trim35Q8C006 Gm26348-201ENSMUST00000157528 240 ntBASIC8.87□□□□□ -0.99
Trim35Q8C006 Ccdc28a-205ENSMUST00000174592 882 ntTSL 5 BASIC8.87□□□□□ -0.99
Trim35Q8C006 Gm20548-205ENSMUST00000174864 787 ntTSL 3 BASIC8.87□□□□□ -0.99
Trim35Q8C006 AF067063-201ENSMUST00000179455 590 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 97 ms