Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Sv2b-204ENSMUST00000206344 3910 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Usp54Q8BL06 Gm13544-201ENSMUST00000131189 2940 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Usp54Q8BL06 Dcdc2c-204ENSMUST00000189735 1434 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Usp54Q8BL06 Vmn1r184-207ENSMUST00000228369 6361 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Usp54Q8BL06 Clca3a1-202ENSMUST00000059091 3524 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Usp54Q8BL06 Pcdh15-214ENSMUST00000129404 6857 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
Usp54Q8BL06 Gm37078-201ENSMUST00000193314 2009 ntBASIC8.24□□□□□ -1.09
Usp54Q8BL06 Etv1-201ENSMUST00000095767 6576 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Usp54Q8BL06 Gm9429-201ENSMUST00000117804 868 ntBASIC8.24□□□□□ -1.09
Usp54Q8BL06 Med9os-202ENSMUST00000139794 446 ntTSL 3 BASIC8.24□□□□□ -1.09
Usp54Q8BL06 Rps27-201ENSMUST00000170122 345 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Usp54Q8BL06 Rps12-ps21-201ENSMUST00000178172 402 ntBASIC8.24□□□□□ -1.09
Usp54Q8BL06 1700111N16Rik-201ENSMUST00000188663 1133 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Usp54Q8BL06 Gm7496-201ENSMUST00000192573 1034 ntBASIC8.24□□□□□ -1.09
Usp54Q8BL06 Gm37421-201ENSMUST00000193088 132 ntBASIC8.24□□□□□ -1.09
Usp54Q8BL06 Gm43803-202ENSMUST00000197765 580 ntTSL 3 BASIC8.24□□□□□ -1.09
Usp54Q8BL06 Clec2j-202ENSMUST00000203658 606 ntBASIC8.24□□□□□ -1.09
Usp54Q8BL06 Gm6702-201ENSMUST00000208496 471 ntBASIC8.24□□□□□ -1.09
Usp54Q8BL06 AC160980.2-201ENSMUST00000225131 949 ntBASIC8.24□□□□□ -1.09
Usp54Q8BL06 Anapc13-201ENSMUST00000038673 411 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Usp54Q8BL06 Sytl2-203ENSMUST00000107211 3790 ntAPPRIS P4 TSL 1 (best) BASIC8.24□□□□□ -1.09
Usp54Q8BL06 Zfp473-203ENSMUST00000120074 3624 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
Usp54Q8BL06 Gm38697-201ENSMUST00000198061 1746 ntBASIC8.24□□□□□ -1.09
Usp54Q8BL06 Pcdh11x-203ENSMUST00000113364 4454 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
Usp54Q8BL06 Iqcb1-202ENSMUST00000114819 2797 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Usp54Q8BL06 1700001G01Rik-201ENSMUST00000125117 1562 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Usp54Q8BL06 Aph1c-202ENSMUST00000169282 5205 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Usp54Q8BL06 Fgf10-201ENSMUST00000022246 4114 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Usp54Q8BL06 Frem1-202ENSMUST00000107230 9690 ntAPPRIS ALT2 TSL 5 BASIC8.24□□□□□ -1.09
Usp54Q8BL06 Slc30a7-201ENSMUST00000067485 9020 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Usp54Q8BL06 Zp3r-203ENSMUST00000142416 1835 ntTSL 5 BASIC8.23□□□□□ -1.09
Usp54Q8BL06 Zfp773-202ENSMUST00000211240 4073 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Usp54Q8BL06 Plekhm3-201ENSMUST00000097713 8562 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Usp54Q8BL06 Olfr295-202ENSMUST00000215365 6013 ntAPPRIS P1 TSL 3 BASIC8.23□□□□□ -1.09
Usp54Q8BL06 Igkv4-92-201ENSMUST00000103332 351 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Usp54Q8BL06 Rpl7a-ps9-201ENSMUST00000117118 777 ntBASIC8.23□□□□□ -1.09
Usp54Q8BL06 Vmn1r-ps112-201ENSMUST00000117475 544 ntBASIC8.23□□□□□ -1.09
Usp54Q8BL06 Gm15741-201ENSMUST00000119401 754 ntBASIC8.23□□□□□ -1.09
Usp54Q8BL06 Gm24103-201ENSMUST00000174930 77 ntBASIC8.23□□□□□ -1.09
Usp54Q8BL06 Gm18728-201ENSMUST00000186155 753 ntBASIC8.23□□□□□ -1.09
Usp54Q8BL06 Gm28976-201ENSMUST00000188070 144 ntBASIC8.23□□□□□ -1.09
Usp54Q8BL06 Gm37336-202ENSMUST00000193705 468 ntBASIC8.23□□□□□ -1.09
Usp54Q8BL06 Gm42502-201ENSMUST00000198550 1089 ntBASIC8.23□□□□□ -1.09
Usp54Q8BL06 AC154755.1-201ENSMUST00000225244 537 ntBASIC8.23□□□□□ -1.09
Usp54Q8BL06 Xpr1-201ENSMUST00000027741 7492 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Usp54Q8BL06 Gm45633-201ENSMUST00000210669 3253 ntBASIC8.23□□□□□ -1.09
Usp54Q8BL06 Gm37553-201ENSMUST00000194135 1602 ntBASIC8.23□□□□□ -1.09
Usp54Q8BL06 Olfr479-203ENSMUST00000214599 3248 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Usp54Q8BL06 Pabpc4l-201ENSMUST00000166505 5218 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
Usp54Q8BL06 Gm28999-201ENSMUST00000188063 1498 ntTSL 5 BASIC8.23□□□□□ -1.09
Usp54Q8BL06 Gm28393-201ENSMUST00000191261 1498 ntTSL 5 BASIC8.23□□□□□ -1.09
Usp54Q8BL06 Gm38168-201ENSMUST00000191717 1493 ntTSL 5 BASIC8.23□□□□□ -1.09
Usp54Q8BL06 Gm37572-202ENSMUST00000194043 1493 ntTSL 5 BASIC8.23□□□□□ -1.09
Usp54Q8BL06 Mlh3-203ENSMUST00000220854 4699 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
Usp54Q8BL06 4930529C04Rik-201ENSMUST00000131367 3534 ntBASIC8.23□□□□□ -1.09
Usp54Q8BL06 Rsrc2-210ENSMUST00000182489 1665 ntTSL 5 BASIC8.23□□□□□ -1.09
Usp54Q8BL06 Cep135-201ENSMUST00000049060 5313 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Usp54Q8BL06 Gm43483-201ENSMUST00000196724 2860 ntBASIC8.22□□□□□ -1.09
Usp54Q8BL06 Gm11805-201ENSMUST00000121238 600 ntBASIC8.22□□□□□ -1.09
Usp54Q8BL06 4933411O13Rik-203ENSMUST00000146849 607 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Usp54Q8BL06 Gm11507-201ENSMUST00000156462 412 ntBASIC8.22□□□□□ -1.09
Usp54Q8BL06 Atxn3-204ENSMUST00000160251 998 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Usp54Q8BL06 2010016I18Rik-203ENSMUST00000189683 841 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Usp54Q8BL06 Trav7d-5-201ENSMUST00000197128 340 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Usp54Q8BL06 Trav7n-5-201ENSMUST00000199753 340 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Usp54Q8BL06 Gm18468-201ENSMUST00000207321 369 ntBASIC8.22□□□□□ -1.09
Usp54Q8BL06 Gm18470-201ENSMUST00000207467 420 ntBASIC8.22□□□□□ -1.09
Usp54Q8BL06 Gm18465-201ENSMUST00000207468 369 ntBASIC8.22□□□□□ -1.09
Usp54Q8BL06 Gm44984-201ENSMUST00000207802 394 ntBASIC8.22□□□□□ -1.09
Usp54Q8BL06 Gm18464-201ENSMUST00000207803 420 ntBASIC8.22□□□□□ -1.09
Usp54Q8BL06 Gm18458-201ENSMUST00000207908 369 ntBASIC8.22□□□□□ -1.09
Usp54Q8BL06 Gm18461-201ENSMUST00000208421 420 ntBASIC8.22□□□□□ -1.09
Usp54Q8BL06 Gm17994-201ENSMUST00000209260 533 ntBASIC8.22□□□□□ -1.09
Usp54Q8BL06 Vmn1r39-202ENSMUST00000226783 918 ntAPPRIS P2 BASIC8.22□□□□□ -1.09
Usp54Q8BL06 Pik3c2g-201ENSMUST00000032353 1206 ntTSL 5 BASIC8.22□□□□□ -1.09
Usp54Q8BL06 Vmn1r46-201ENSMUST00000075797 930 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Usp54Q8BL06 Olfr704-202ENSMUST00000098141 948 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Usp54Q8BL06 Nudt5-201ENSMUST00000026927 4764 ntAPPRIS P1 TSL 3 BASIC8.22□□□□□ -1.09
Usp54Q8BL06 Gm44829-201ENSMUST00000208008 3193 ntBASIC8.22□□□□□ -1.09
Usp54Q8BL06 Nr3c1-204ENSMUST00000115571 6327 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Usp54Q8BL06 Arhgap15-203ENSMUST00000112824 3118 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Usp54Q8BL06 Pias1-202ENSMUST00000214830 2492 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Usp54Q8BL06 Olfr370-202ENSMUST00000209408 4600 ntAPPRIS P1 TSL 3 BASIC8.22□□□□□ -1.09
Usp54Q8BL06 Scd4-201ENSMUST00000058856 3306 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Usp54Q8BL06 Nceh1-201ENSMUST00000046515 4480 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Usp54Q8BL06 AC116726.1-201ENSMUST00000215028 3497 ntBASIC8.22□□□□□ -1.09
Usp54Q8BL06 Vmn1r208-202ENSMUST00000227136 3156 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Usp54Q8BL06 Cacna1c-207ENSMUST00000186889 13162 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Usp54Q8BL06 Olfr406-202ENSMUST00000214303 2842 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Usp54Q8BL06 Gm26707-201ENSMUST00000181552 3902 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Usp54Q8BL06 Tubal3-201ENSMUST00000021639 3096 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Usp54Q8BL06 Il21-201ENSMUST00000029273 3072 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
Usp54Q8BL06 Ddx19b-201ENSMUST00000040241 6612 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Usp54Q8BL06 Them5-202ENSMUST00000198083 1378 ntTSL 5 BASIC8.22□□□□□ -1.09
Usp54Q8BL06 Ncoa7-210ENSMUST00000217138 2192 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Usp54Q8BL06 Gm31218-202ENSMUST00000221428 1823 ntTSL 5 BASIC8.22□□□□□ -1.09
Usp54Q8BL06 Gm15840-201ENSMUST00000122099 943 ntBASIC8.22□□□□□ -1.09
Usp54Q8BL06 Trav6-5-202ENSMUST00000183488 335 ntAPPRIS ALT2 BASIC8.22□□□□□ -1.09
Usp54Q8BL06 D530049I02Rik-201ENSMUST00000186582 562 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Usp54Q8BL06 Olfr697-202ENSMUST00000217734 1190 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms