Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Mug1-201ENSMUST00000032228 4657 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Upf3bQ3ULL6 Gm4841-201ENSMUST00000090260 2838 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
Upf3bQ3ULL6 4930554C24Rik-203ENSMUST00000216802 1346 ntTSL 5 BASIC6.26□□□□□ -1.41
Upf3bQ3ULL6 Actrt1-201ENSMUST00000059466 1339 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Upf3bQ3ULL6 Dlx6os1-201ENSMUST00000159568 4608 ntTSL 5 BASIC6.26□□□□□ -1.41
Upf3bQ3ULL6 Dcdc2c-204ENSMUST00000189735 1434 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Upf3bQ3ULL6 Gabrb1-201ENSMUST00000031122 13737 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Upf3bQ3ULL6 Rnf24-201ENSMUST00000059372 5978 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Upf3bQ3ULL6 Syt4-201ENSMUST00000025110 3901 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Upf3bQ3ULL6 Gm38062-201ENSMUST00000192541 1856 ntBASIC6.26□□□□□ -1.41
Upf3bQ3ULL6 Olfr922-202ENSMUST00000213164 4028 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Upf3bQ3ULL6 Lipn-201ENSMUST00000025682 1502 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Upf3bQ3ULL6 Il1rapl2-201ENSMUST00000075471 2061 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Upf3bQ3ULL6 Atp12a-201ENSMUST00000007340 3950 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Upf3bQ3ULL6 Zfp449-201ENSMUST00000101560 3738 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Upf3bQ3ULL6 F830016B08Rik-201ENSMUST00000171297 3297 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Upf3bQ3ULL6 Vmn1r35-204ENSMUST00000227749 2254 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Upf3bQ3ULL6 Olfr361-201ENSMUST00000100145 969 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Upf3bQ3ULL6 Olfr407-ps1-201ENSMUST00000117794 866 ntBASIC6.26□□□□□ -1.41
Upf3bQ3ULL6 Gm11485-201ENSMUST00000120048 1175 ntBASIC6.26□□□□□ -1.41
Upf3bQ3ULL6 Gm14805-201ENSMUST00000120172 340 ntBASIC6.26□□□□□ -1.41
Upf3bQ3ULL6 Gm14712-201ENSMUST00000120195 772 ntBASIC6.26□□□□□ -1.41
Upf3bQ3ULL6 Olfr1021-ps1-201ENSMUST00000121914 1042 ntAPPRIS P1 TSL 3 BASIC6.26□□□□□ -1.41
Upf3bQ3ULL6 Vmn1r-ps94-201ENSMUST00000122016 458 ntBASIC6.26□□□□□ -1.41
Upf3bQ3ULL6 Gm14237-201ENSMUST00000122080 430 ntBASIC6.26□□□□□ -1.41
Upf3bQ3ULL6 Gm15840-201ENSMUST00000122099 943 ntBASIC6.26□□□□□ -1.41
Upf3bQ3ULL6 Gm12488-201ENSMUST00000122449 499 ntBASIC6.26□□□□□ -1.41
Upf3bQ3ULL6 Fam229b-202ENSMUST00000124941 721 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Upf3bQ3ULL6 Gm5834-201ENSMUST00000126680 1026 ntBASIC6.26□□□□□ -1.41
Upf3bQ3ULL6 Gm16135-201ENSMUST00000129470 568 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Upf3bQ3ULL6 Gm11528-201ENSMUST00000156822 914 ntTSL 2 BASIC6.26□□□□□ -1.41
Upf3bQ3ULL6 Gm23149-201ENSMUST00000158837 230 ntBASIC6.26□□□□□ -1.41
Upf3bQ3ULL6 Gm24103-201ENSMUST00000174930 77 ntBASIC6.26□□□□□ -1.41
Upf3bQ3ULL6 Gm22932-201ENSMUST00000175510 72 ntBASIC6.26□□□□□ -1.41
Upf3bQ3ULL6 AF067063-201ENSMUST00000179455 590 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Upf3bQ3ULL6 Gm27193-201ENSMUST00000184217 586 ntBASIC6.26□□□□□ -1.41
Upf3bQ3ULL6 Gm5334-201ENSMUST00000187472 720 ntBASIC6.26□□□□□ -1.41
Upf3bQ3ULL6 Gm6693-201ENSMUST00000189583 813 ntBASIC6.26□□□□□ -1.41
Upf3bQ3ULL6 Rpl7a-ps14-201ENSMUST00000205097 790 ntBASIC6.26□□□□□ -1.41
Upf3bQ3ULL6 Gm44768-201ENSMUST00000205719 393 ntBASIC6.26□□□□□ -1.41
Upf3bQ3ULL6 Gm44840-201ENSMUST00000208983 1168 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Upf3bQ3ULL6 Gm45334-201ENSMUST00000211118 1227 ntTSL 5 BASIC6.26□□□□□ -1.41
Upf3bQ3ULL6 AC124826.1-201ENSMUST00000221651 325 ntBASIC6.26□□□□□ -1.41
Upf3bQ3ULL6 Gm5612-201ENSMUST00000053326 375 ntBASIC6.26□□□□□ -1.41
Upf3bQ3ULL6 Gm22126-201ENSMUST00000083244 142 ntBASIC6.26□□□□□ -1.41
Upf3bQ3ULL6 Reg3b-201ENSMUST00000096904 783 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Upf3bQ3ULL6 Serpinb9-202ENSMUST00000063191 3472 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Upf3bQ3ULL6 Gm5868-201ENSMUST00000031124 1382 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Upf3bQ3ULL6 BC018473-204ENSMUST00000156293 4753 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Upf3bQ3ULL6 Scd4-201ENSMUST00000058856 3306 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Upf3bQ3ULL6 Olfr537-ps1-201ENSMUST00000209871 2792 ntAPPRIS P1 TSL 3 BASIC6.26□□□□□ -1.41
Upf3bQ3ULL6 Zbed4-ps2-201ENSMUST00000187003 3448 ntBASIC6.26□□□□□ -1.41
Upf3bQ3ULL6 Ryr3-201ENSMUST00000080673 15422 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
Upf3bQ3ULL6 Olfr1382-203ENSMUST00000213707 4294 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Upf3bQ3ULL6 Olfr1382-204ENSMUST00000213899 4285 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Upf3bQ3ULL6 Olfr1382-205ENSMUST00000217564 4287 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Upf3bQ3ULL6 Hnf4g-202ENSMUST00000108394 2327 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
Upf3bQ3ULL6 Vmn1r36-201ENSMUST00000226142 1770 ntAPPRIS ALT2 BASIC6.26□□□□□ -1.41
Upf3bQ3ULL6 Gm10310-202ENSMUST00000213667 4661 ntAPPRIS P5 TSL 5 BASIC6.26□□□□□ -1.41
Upf3bQ3ULL6 4930550C14Rik-203ENSMUST00000215668 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Upf3bQ3ULL6 Prom1-203ENSMUST00000087441 3664 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
Upf3bQ3ULL6 Slfn8-206ENSMUST00000215239 2930 ntTSL 5 BASIC6.26□□□□□ -1.41
Upf3bQ3ULL6 Kcnma1-202ENSMUST00000074983 3974 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
Upf3bQ3ULL6 Ncoa7-212ENSMUST00000217644 2256 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Upf3bQ3ULL6 AC144733.2-201ENSMUST00000222552 2292 ntBASIC6.25□□□□□ -1.41
Upf3bQ3ULL6 Olfr110-202ENSMUST00000216472 1721 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Upf3bQ3ULL6 Pon3-201ENSMUST00000031773 1837 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Upf3bQ3ULL6 Olfr527-203ENSMUST00000214858 3362 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Upf3bQ3ULL6 Gm13428-201ENSMUST00000117540 365 ntBASIC6.25□□□□□ -1.41
Upf3bQ3ULL6 Gm11617-201ENSMUST00000119609 639 ntBASIC6.25□□□□□ -1.41
Upf3bQ3ULL6 Gm14679-201ENSMUST00000121536 722 ntBASIC6.25□□□□□ -1.41
Upf3bQ3ULL6 Olfr213-201ENSMUST00000121958 984 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Upf3bQ3ULL6 Gm20069-201ENSMUST00000178938 545 ntTSL 2 BASIC6.25□□□□□ -1.41
Upf3bQ3ULL6 Gm27210-201ENSMUST00000184263 402 ntBASIC6.25□□□□□ -1.41
Upf3bQ3ULL6 Gm28782-201ENSMUST00000185980 414 ntTSL 3 BASIC6.25□□□□□ -1.41
Upf3bQ3ULL6 1700044C05Rik-201ENSMUST00000186060 898 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Upf3bQ3ULL6 Gm8930-201ENSMUST00000201693 768 ntBASIC6.25□□□□□ -1.41
Upf3bQ3ULL6 Gm42961-201ENSMUST00000202023 181 ntBASIC6.25□□□□□ -1.41
Upf3bQ3ULL6 Gm18009-201ENSMUST00000203239 1016 ntBASIC6.25□□□□□ -1.41
Upf3bQ3ULL6 Ifitm6-203ENSMUST00000211330 813 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
Upf3bQ3ULL6 Gm8523-201ENSMUST00000211386 552 ntBASIC6.25□□□□□ -1.41
Upf3bQ3ULL6 Gm5831-201ENSMUST00000216016 1209 ntBASIC6.25□□□□□ -1.41
Upf3bQ3ULL6 Psma4-201ENSMUST00000034848 1165 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Upf3bQ3ULL6 1700028P14Rik-201ENSMUST00000035849 868 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Upf3bQ3ULL6 Gm5142-201ENSMUST00000066558 626 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Upf3bQ3ULL6 Gm38372-201ENSMUST00000194854 4028 ntBASIC6.25□□□□□ -1.41
Upf3bQ3ULL6 Gm42510-201ENSMUST00000196470 2258 ntBASIC6.25□□□□□ -1.41
Upf3bQ3ULL6 Gm21655-202ENSMUST00000199295 2975 ntTSL 5 BASIC6.25□□□□□ -1.41
Upf3bQ3ULL6 Gm21680-201ENSMUST00000200447 2975 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Upf3bQ3ULL6 Phospho2-206ENSMUST00000180290 3267 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Upf3bQ3ULL6 Ankrd34c-201ENSMUST00000060700 5457 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Upf3bQ3ULL6 Gm37079-201ENSMUST00000194114 2135 ntBASIC6.25□□□□□ -1.41
Upf3bQ3ULL6 Zfp638-220ENSMUST00000204751 9033 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
Upf3bQ3ULL6 Asah2-201ENSMUST00000096119 4682 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Upf3bQ3ULL6 Celf2-201ENSMUST00000002176 7718 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
Upf3bQ3ULL6 Cyp2j13-201ENSMUST00000030305 4374 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Upf3bQ3ULL6 Gm5799-201ENSMUST00000169023 1314 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Upf3bQ3ULL6 Csde1-214ENSMUST00000199240 3457 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Upf3bQ3ULL6 Pcdh9-202ENSMUST00000192221 5161 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Upf3bQ3ULL6 Spata22-201ENSMUST00000117445 3200 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 716 ms