Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm28454-203ENSMUST00000190183 1495 ntTSL 5 BASIC5.17□□□□□ -1.58
Nkx3-1P97436 Gm28842-202ENSMUST00000190289 1499 ntTSL 5 BASIC5.17□□□□□ -1.58
Nkx3-1P97436 Gm28259-201ENSMUST00000190319 1497 ntTSL 5 BASIC5.17□□□□□ -1.58
Nkx3-1P97436 Gm28318-203ENSMUST00000190347 1499 ntTSL 5 BASIC5.17□□□□□ -1.58
Nkx3-1P97436 Gm28633-202ENSMUST00000190867 1485 ntTSL 5 BASIC5.17□□□□□ -1.58
Nkx3-1P97436 Gm29182-202ENSMUST00000191008 1499 ntTSL 5 BASIC5.17□□□□□ -1.58
Nkx3-1P97436 Gm28632-202ENSMUST00000191193 1499 ntTSL 5 BASIC5.17□□□□□ -1.58
Nkx3-1P97436 Gm28245-203ENSMUST00000191551 1495 ntTSL 5 BASIC5.17□□□□□ -1.58
Nkx3-1P97436 Gm38370-201ENSMUST00000192545 1499 ntTSL 5 BASIC5.17□□□□□ -1.58
Nkx3-1P97436 Gm37462-201ENSMUST00000193386 1498 ntTSL 5 BASIC5.17□□□□□ -1.58
Nkx3-1P97436 Gm32114-203ENSMUST00000195759 1499 ntTSL 5 BASIC5.17□□□□□ -1.58
Nkx3-1P97436 Galnt13-201ENSMUST00000068595 1671 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Nkx3-1P97436 4932415D10Rik-201ENSMUST00000171401 3163 ntBASIC5.17□□□□□ -1.58
Nkx3-1P97436 Celf2-201ENSMUST00000002176 7718 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
Nkx3-1P97436 AC164297.2-201ENSMUST00000224388 1508 ntBASIC5.17□□□□□ -1.58
Nkx3-1P97436 Pirt-201ENSMUST00000123434 4200 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Nkx3-1P97436 Olfr1505-203ENSMUST00000216835 3685 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Nkx3-1P97436 AC160028.2-201ENSMUST00000218937 2519 ntBASIC5.17□□□□□ -1.58
Nkx3-1P97436 Kcnmb2-202ENSMUST00000119970 2919 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Nkx3-1P97436 Olfr1080-201ENSMUST00000213185 1582 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
Nkx3-1P97436 Serpinb6b-202ENSMUST00000110293 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Nkx3-1P97436 Scn1a-203ENSMUST00000112366 8386 ntAPPRIS ALT1 TSL 5 BASIC5.16□□□□□ -1.58
Nkx3-1P97436 Gm29438-201ENSMUST00000191298 2613 ntBASIC5.16□□□□□ -1.58
Nkx3-1P97436 Arhgap15-201ENSMUST00000055776 2604 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Nkx3-1P97436 Gm16503-201ENSMUST00000104964 3283 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Nkx3-1P97436 Gm28320-201ENSMUST00000187777 2273 ntBASIC5.16□□□□□ -1.58
Nkx3-1P97436 Lrriq1-201ENSMUST00000020043 2542 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Nkx3-1P97436 Gm13890-201ENSMUST00000117578 390 ntBASIC5.16□□□□□ -1.58
Nkx3-1P97436 Gm14521-201ENSMUST00000119545 350 ntBASIC5.16□□□□□ -1.58
Nkx3-1P97436 Gm13531-201ENSMUST00000121893 543 ntBASIC5.16□□□□□ -1.58
Nkx3-1P97436 Klra13-ps-201ENSMUST00000125813 802 ntBASIC5.16□□□□□ -1.58
Nkx3-1P97436 C030037D09Rik-201ENSMUST00000125967 367 ntTSL 5 BASIC5.16□□□□□ -1.58
Nkx3-1P97436 Gm4764-201ENSMUST00000130207 1233 ntBASIC5.16□□□□□ -1.58
Nkx3-1P97436 Gm22867-201ENSMUST00000157499 109 ntBASIC5.16□□□□□ -1.58
Nkx3-1P97436 Gm23224-201ENSMUST00000158122 271 ntBASIC5.16□□□□□ -1.58
Nkx3-1P97436 Gm24767-201ENSMUST00000158509 95 ntBASIC5.16□□□□□ -1.58
Nkx3-1P97436 Gm8323-201ENSMUST00000168436 1201 ntBASIC5.16□□□□□ -1.58
Nkx3-1P97436 Vmn1r-ps64-201ENSMUST00000173746 655 ntBASIC5.16□□□□□ -1.58
Nkx3-1P97436 Gm20480-201ENSMUST00000173953 250 ntBASIC5.16□□□□□ -1.58
Nkx3-1P97436 Gm2877-201ENSMUST00000178248 1204 ntBASIC5.16□□□□□ -1.58
Nkx3-1P97436 Gm8324-201ENSMUST00000178911 1204 ntBASIC5.16□□□□□ -1.58
Nkx3-1P97436 Gm2871-201ENSMUST00000179984 1204 ntBASIC5.16□□□□□ -1.58
Nkx3-1P97436 Gm1972-201ENSMUST00000181606 964 ntBASIC5.16□□□□□ -1.58
Nkx3-1P97436 Gm10603-203ENSMUST00000184875 508 ntTSL 3 BASIC5.16□□□□□ -1.58
Nkx3-1P97436 1700029M03Rik-202ENSMUST00000187517 357 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Nkx3-1P97436 A430093F15Rik-206ENSMUST00000189565 651 ntTSL 3 BASIC5.16□□□□□ -1.58
Nkx3-1P97436 Gm28467-201ENSMUST00000190981 318 ntBASIC5.16□□□□□ -1.58
Nkx3-1P97436 Gm18865-201ENSMUST00000193011 1171 ntBASIC5.16□□□□□ -1.58
Nkx3-1P97436 Gm33651-201ENSMUST00000200405 456 ntTSL 5 BASIC5.16□□□□□ -1.58
Nkx3-1P97436 Gm36328-201ENSMUST00000204237 432 ntTSL 3 BASIC5.16□□□□□ -1.58
Nkx3-1P97436 Gm5318-201ENSMUST00000205249 406 ntBASIC5.16□□□□□ -1.58
Nkx3-1P97436 AC158630.1-201ENSMUST00000214387 993 ntTSL 5 BASIC5.16□□□□□ -1.58
Nkx3-1P97436 Olfr1084-201ENSMUST00000216851 961 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Nkx3-1P97436 CT030170.4-202ENSMUST00000221109 540 ntBASIC5.16□□□□□ -1.58
Nkx3-1P97436 CT010431.1-201ENSMUST00000221249 1080 ntBASIC5.16□□□□□ -1.58
Nkx3-1P97436 Cd160-201ENSMUST00000047702 1121 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
Nkx3-1P97436 Fgb-201ENSMUST00000048246 3810 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Nkx3-1P97436 Spint3-201ENSMUST00000099097 557 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Nkx3-1P97436 Car5b-201ENSMUST00000033739 3436 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Nkx3-1P97436 Themis-203ENSMUST00000105516 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Nkx3-1P97436 Olfr1389-203ENSMUST00000217595 3549 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Nkx3-1P97436 Vmn2r-ps44-201ENSMUST00000174053 2412 ntBASIC5.16□□□□□ -1.58
Nkx3-1P97436 Taf7-201ENSMUST00000066272 3302 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Nkx3-1P97436 Gm30570-201ENSMUST00000213553 2651 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Nkx3-1P97436 Psd3-205ENSMUST00000098696 11316 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Nkx3-1P97436 Zfp473-203ENSMUST00000120074 3624 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
Nkx3-1P97436 Olfr55-204ENSMUST00000216633 4758 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Nkx3-1P97436 Gm10220-201ENSMUST00000088236 2980 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Nkx3-1P97436 Slf1-201ENSMUST00000151524 3747 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Nkx3-1P97436 Abcc9-204ENSMUST00000111771 7499 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
Nkx3-1P97436 AC116950.1-201ENSMUST00000226322 3250 ntBASIC5.15□□□□□ -1.58
Nkx3-1P97436 Vmn2r97-201ENSMUST00000168710 2586 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Nkx3-1P97436 5330409N07Rik-201ENSMUST00000222069 3518 ntBASIC5.15□□□□□ -1.58
Nkx3-1P97436 Gm7073-203ENSMUST00000190178 1419 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Nkx3-1P97436 Gria4-204ENSMUST00000212533 5207 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Nkx3-1P97436 Naip2-203ENSMUST00000167986 4356 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.58
Nkx3-1P97436 Bicd1-201ENSMUST00000003544 2928 ntAPPRIS ALT1 TSL 5 BASIC5.15□□□□□ -1.58
Nkx3-1P97436 Gm14367-201ENSMUST00000119214 1497 ntBASIC5.15□□□□□ -1.58
Nkx3-1P97436 Olfr121-202ENSMUST00000174675 1494 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Nkx3-1P97436 Btbd35f9-201ENSMUST00000178219 1497 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
Nkx3-1P97436 Btbd35f22-201ENSMUST00000178747 1497 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
Nkx3-1P97436 Btbd35f30-201ENSMUST00000179069 1497 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
Nkx3-1P97436 Btbd35f25-201ENSMUST00000179086 1497 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
Nkx3-1P97436 Btbd35f6-201ENSMUST00000179466 1497 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
Nkx3-1P97436 Btbd35f29-201ENSMUST00000179532 1497 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
Nkx3-1P97436 Btbd35f8-201ENSMUST00000180004 1497 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
Nkx3-1P97436 Btbd35f26-201ENSMUST00000180197 1497 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
Nkx3-1P97436 Olfr110-202ENSMUST00000216472 1721 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Nkx3-1P97436 Dopey1-201ENSMUST00000034987 8933 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
Nkx3-1P97436 Gm12324-201ENSMUST00000130837 3753 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Nkx3-1P97436 Il7r-204ENSMUST00000228782 3516 ntAPPRIS ALT2 BASIC5.15□□□□□ -1.58
Nkx3-1P97436 Gm43425-201ENSMUST00000201793 3291 ntBASIC5.15□□□□□ -1.58
Nkx3-1P97436 Vmn1r37-204ENSMUST00000226974 1770 ntAPPRIS P2 BASIC5.15□□□□□ -1.58
Nkx3-1P97436 Gm8750-201ENSMUST00000173278 1537 ntBASIC5.15□□□□□ -1.58
Nkx3-1P97436 Gm25919-201ENSMUST00000104271 132 ntBASIC5.15□□□□□ -1.59
Nkx3-1P97436 Gm8501-201ENSMUST00000117684 432 ntBASIC5.15□□□□□ -1.59
Nkx3-1P97436 Usp17le-ps-201ENSMUST00000117954 957 ntBASIC5.15□□□□□ -1.59
Nkx3-1P97436 Olfr587-ps1-201ENSMUST00000118378 948 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Nkx3-1P97436 Gm15040-201ENSMUST00000118561 1241 ntBASIC5.15□□□□□ -1.59
Nkx3-1P97436 Olfr405-ps1-201ENSMUST00000120649 936 ntBASIC5.15□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms