Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Cox11-202ENSMUST00000099960 773 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
Rfc1P35601 Lamp3-201ENSMUST00000081880 3343 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Rfc1P35601 Fignl1-202ENSMUST00000109664 2807 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Rfc1P35601 Vmn2r-ps56-201ENSMUST00000174814 2596 ntBASIC6.17□□□□□ -1.42
Rfc1P35601 Olfr736-203ENSMUST00000213755 2338 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Rfc1P35601 Map7d3-201ENSMUST00000114766 2891 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Rfc1P35601 Papola-215ENSMUST00000170002 2605 ntTSL 5 BASIC6.17□□□□□ -1.42
Rfc1P35601 Spef2-201ENSMUST00000041840 4247 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Rfc1P35601 Pot1a-203ENSMUST00000115330 3151 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Rfc1P35601 Gm45554-203ENSMUST00000211410 2137 ntTSL 5 BASIC6.17□□□□□ -1.42
Rfc1P35601 Fbxo3-202ENSMUST00000102565 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Rfc1P35601 Ints6l-202ENSMUST00000101553 3201 ntTSL 2 BASIC6.17□□□□□ -1.42
Rfc1P35601 Gm37776-201ENSMUST00000193471 2497 ntBASIC6.17□□□□□ -1.42
Rfc1P35601 AC117608.2-201ENSMUST00000224124 1363 ntBASIC6.17□□□□□ -1.42
Rfc1P35601 AC122355.1-201ENSMUST00000228155 4184 ntBASIC6.17□□□□□ -1.42
Rfc1P35601 Ptprq-201ENSMUST00000050702 7393 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
Rfc1P35601 Amy2a3-201ENSMUST00000179314 3717 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Rfc1P35601 Amy2a4-201ENSMUST00000179568 3717 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Rfc1P35601 Amy2a2-201ENSMUST00000098667 3717 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Rfc1P35601 Scn9a-206ENSMUST00000164384 7530 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Rfc1P35601 Bicd1-201ENSMUST00000003544 2928 ntAPPRIS ALT1 TSL 5 BASIC6.16□□□□□ -1.42
Rfc1P35601 Gm16185-201ENSMUST00000125071 3207 ntTSL 5 BASIC6.16□□□□□ -1.42
Rfc1P35601 Pih1d3-201ENSMUST00000027230 1451 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Rfc1P35601 Heph-202ENSMUST00000079322 3904 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Rfc1P35601 Vmn1r33-202ENSMUST00000227418 2414 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Rfc1P35601 Gm42827-201ENSMUST00000197058 1515 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Rfc1P35601 Olfr1474-203ENSMUST00000220113 1539 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Rfc1P35601 AC156025.2-201ENSMUST00000225907 1533 ntBASIC6.16□□□□□ -1.42
Rfc1P35601 Nxf7-201ENSMUST00000033784 1863 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Rfc1P35601 A730009L09Rik-201ENSMUST00000209558 2512 ntAPPRIS P5 TSL 1 (best) BASIC6.16□□□□□ -1.42
Rfc1P35601 Olfr432-202ENSMUST00000213211 4435 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Rfc1P35601 Cc2d2b-205ENSMUST00000224596 4762 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Rfc1P35601 Gm15366-201ENSMUST00000118433 1019 ntBASIC6.16□□□□□ -1.42
Rfc1P35601 Mup9-202ENSMUST00000118759 909 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Rfc1P35601 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
Rfc1P35601 Mup9-204ENSMUST00000122381 864 ntAPPRIS P2 TSL 2 BASIC6.16□□□□□ -1.42
Rfc1P35601 Gm14216-201ENSMUST00000136046 409 ntTSL 3 BASIC6.16□□□□□ -1.42
Rfc1P35601 Gm11731-201ENSMUST00000139704 670 ntTSL 3 BASIC6.16□□□□□ -1.42
Rfc1P35601 4933407I08Rik-201ENSMUST00000151215 1294 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Rfc1P35601 Gm22160-201ENSMUST00000158405 328 ntBASIC6.16□□□□□ -1.42
Rfc1P35601 Gm23115-201ENSMUST00000158480 108 ntBASIC6.16□□□□□ -1.42
Rfc1P35601 Gm23343-201ENSMUST00000158964 143 ntBASIC6.16□□□□□ -1.42
Rfc1P35601 Speer1-201ENSMUST00000172106 1123 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Rfc1P35601 Pdzph1-203ENSMUST00000177360 950 ntTSL 5 BASIC6.16□□□□□ -1.42
Rfc1P35601 Gm29082-201ENSMUST00000185207 448 ntTSL 5 BASIC6.16□□□□□ -1.42
Rfc1P35601 Gm29060-201ENSMUST00000185339 457 ntTSL 5 BASIC6.16□□□□□ -1.42
Rfc1P35601 Gm28887-201ENSMUST00000186065 294 ntTSL 5 BASIC6.16□□□□□ -1.42
Rfc1P35601 Gm28664-201ENSMUST00000186118 457 ntTSL 5 BASIC6.16□□□□□ -1.42
Rfc1P35601 Snhg14-205ENSMUST00000186345 456 ntTSL 5 BASIC6.16□□□□□ -1.42
Rfc1P35601 Krtdap-203ENSMUST00000187493 420 ntTSL 2 BASIC6.16□□□□□ -1.42
Rfc1P35601 Gm28817-201ENSMUST00000187598 830 ntTSL 5 BASIC6.16□□□□□ -1.42
Rfc1P35601 Gm29209-201ENSMUST00000188176 457 ntTSL 5 BASIC6.16□□□□□ -1.42
Rfc1P35601 Gm29090-201ENSMUST00000188526 457 ntTSL 5 BASIC6.16□□□□□ -1.42
Rfc1P35601 Krtdap-205ENSMUST00000189673 345 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Rfc1P35601 Krtdap-206ENSMUST00000189962 323 ntTSL 3 BASIC6.16□□□□□ -1.42
Rfc1P35601 Krtdap-209ENSMUST00000190990 403 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Rfc1P35601 9430087B13Rik-201ENSMUST00000196548 1085 ntBASIC6.16□□□□□ -1.42
Rfc1P35601 Gm42707-201ENSMUST00000196620 322 ntTSL 5 BASIC6.16□□□□□ -1.42
Rfc1P35601 Gm43467-201ENSMUST00000197441 437 ntBASIC6.16□□□□□ -1.42
Rfc1P35601 Gm42824-201ENSMUST00000199361 247 ntBASIC6.16□□□□□ -1.42
Rfc1P35601 Gm44707-201ENSMUST00000206293 1216 ntTSL 5 BASIC6.16□□□□□ -1.42
Rfc1P35601 Gm40787-201ENSMUST00000218056 317 ntTSL 3 BASIC6.16□□□□□ -1.42
Rfc1P35601 Asf1a-204ENSMUST00000219271 725 ntTSL 5 BASIC6.16□□□□□ -1.42
Rfc1P35601 CT009713.1-201ENSMUST00000224828 853 ntBASIC6.16□□□□□ -1.42
Rfc1P35601 AC123061.2-201ENSMUST00000226234 802 ntBASIC6.16□□□□□ -1.42
Rfc1P35601 Vmn1r89-201ENSMUST00000053008 951 ntAPPRIS P2 BASIC6.16□□□□□ -1.42
Rfc1P35601 Mup20-201ENSMUST00000074018 928 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Rfc1P35601 Gm22300-201ENSMUST00000082661 126 ntBASIC6.16□□□□□ -1.42
Rfc1P35601 Gm22581-201ENSMUST00000083735 136 ntBASIC6.16□□□□□ -1.42
Rfc1P35601 Gm29486-201ENSMUST00000088648 372 ntBASIC6.16□□□□□ -1.42
Rfc1P35601 Mup18-201ENSMUST00000098040 930 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Rfc1P35601 Mup11-202ENSMUST00000098046 930 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Rfc1P35601 Mup10-201ENSMUST00000098047 927 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
Rfc1P35601 Krtdap-201ENSMUST00000098559 470 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Rfc1P35601 Gm42702-201ENSMUST00000199515 4217 ntBASIC6.16□□□□□ -1.42
Rfc1P35601 Scaper-204ENSMUST00000216595 2911 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Rfc1P35601 CT030159.1-201ENSMUST00000221580 2261 ntBASIC6.16□□□□□ -1.42
Rfc1P35601 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Rfc1P35601 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Rfc1P35601 Gm45177-201ENSMUST00000209104 2307 ntBASIC6.16□□□□□ -1.42
Rfc1P35601 Impg1-201ENSMUST00000085289 3356 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Rfc1P35601 Vmn1r34-206ENSMUST00000228498 3078 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Rfc1P35601 Olfr1275-202ENSMUST00000216421 2418 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Rfc1P35601 Neto2-203ENSMUST00000209479 4936 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Rfc1P35601 Gm43328-201ENSMUST00000198544 1434 ntBASIC6.16□□□□□ -1.42
Rfc1P35601 Gm34921-201ENSMUST00000219528 1406 ntTSL 5 BASIC6.16□□□□□ -1.42
Rfc1P35601 9430007A20Rik-201ENSMUST00000030328 1406 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Rfc1P35601 AC162467.3-201ENSMUST00000219716 2172 ntBASIC6.16□□□□□ -1.42
Rfc1P35601 Gm44518-201ENSMUST00000208080 4370 ntBASIC6.15□□□□□ -1.42
Rfc1P35601 Gm15675-201ENSMUST00000130486 3681 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Rfc1P35601 Matr3-215ENSMUST00000190121 2638 ntTSL 5 BASIC6.15□□□□□ -1.42
Rfc1P35601 Akap11-201ENSMUST00000022593 5688 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
Rfc1P35601 Nipal1-201ENSMUST00000087212 4206 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Rfc1P35601 Il5ra-202ENSMUST00000204659 3575 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Rfc1P35601 Gm15457-201ENSMUST00000129513 3990 ntTSL 2 BASIC6.15□□□□□ -1.42
Rfc1P35601 Lpp-203ENSMUST00000115314 14854 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Rfc1P35601 9830107B12Rik-201ENSMUST00000063481 3639 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Rfc1P35601 Gm29488-201ENSMUST00000191427 2402 ntBASIC6.15□□□□□ -1.42
Rfc1P35601 Gm17751-201ENSMUST00000189132 2004 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Rfc1P35601 AC125095.1-201ENSMUST00000228387 2020 ntBASIC6.15□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms