Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Trp53bp1-201ENSMUST00000110647 9405 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
BdnfP21237 4933440M02Rik-201ENSMUST00000061823 3801 ntTSL 2 BASIC6.05□□□□□ -1.44
BdnfP21237 Iqca-201ENSMUST00000113094 3210 ntAPPRIS P2 TSL 5 BASIC6.05□□□□□ -1.44
BdnfP21237 Gm42892-201ENSMUST00000196227 3973 ntBASIC6.05□□□□□ -1.44
BdnfP21237 Gm9602-201ENSMUST00000163325 2062 ntAPPRIS P5 TSL 1 (best) BASIC6.05□□□□□ -1.44
BdnfP21237 Gm8356-201ENSMUST00000163636 2062 ntAPPRIS P5 TSL 5 BASIC6.05□□□□□ -1.44
BdnfP21237 Kpna2-201ENSMUST00000018506 2054 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
BdnfP21237 Gm7903-202ENSMUST00000179953 3519 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
BdnfP21237 Prom1-205ENSMUST00000165909 4089 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
BdnfP21237 4930533I22Rik-201ENSMUST00000176290 2564 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
BdnfP21237 Trav14-3-201ENSMUST00000103589 384 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
BdnfP21237 Trav14n-3-201ENSMUST00000103635 280 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
BdnfP21237 Gm14308-202ENSMUST00000117267 777 ntTSL 3 BASIC6.05□□□□□ -1.44
BdnfP21237 Gm14356-201ENSMUST00000118322 869 ntBASIC6.05□□□□□ -1.44
BdnfP21237 Gm13735-201ENSMUST00000120217 670 ntBASIC6.05□□□□□ -1.44
BdnfP21237 Vamp7-ps-201ENSMUST00000120334 655 ntBASIC6.05□□□□□ -1.44
BdnfP21237 Gm11925-201ENSMUST00000121375 535 ntBASIC6.05□□□□□ -1.44
BdnfP21237 Gm4886-201ENSMUST00000121874 1176 ntBASIC6.05□□□□□ -1.44
BdnfP21237 Gm14353-201ENSMUST00000122200 869 ntBASIC6.05□□□□□ -1.44
BdnfP21237 Gm17152-201ENSMUST00000172430 535 ntBASIC6.05□□□□□ -1.44
BdnfP21237 Prl3c1-203ENSMUST00000178072 579 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
BdnfP21237 Gm26692-201ENSMUST00000180428 688 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
BdnfP21237 Spata17-208ENSMUST00000184543 667 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
BdnfP21237 Gm8953-201ENSMUST00000198497 904 ntTSL 5 BASIC6.05□□□□□ -1.44
BdnfP21237 Gm34333-201ENSMUST00000200363 669 ntTSL 3 BASIC6.05□□□□□ -1.44
BdnfP21237 Gm9367-201ENSMUST00000205703 546 ntBASIC6.05□□□□□ -1.44
BdnfP21237 Gm44683-201ENSMUST00000209088 484 ntBASIC6.05□□□□□ -1.44
BdnfP21237 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC6.05□□□□□ -1.44
BdnfP21237 Gm45479-201ENSMUST00000211613 802 ntTSL 3 BASIC6.05□□□□□ -1.44
BdnfP21237 Gm7780-201ENSMUST00000214787 406 ntBASIC6.05□□□□□ -1.44
BdnfP21237 AC117245.2-201ENSMUST00000216943 570 ntTSL 5 BASIC6.05□□□□□ -1.44
BdnfP21237 Mrpl42-203ENSMUST00000218893 661 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
BdnfP21237 AC151904.5-201ENSMUST00000218975 549 ntBASIC6.05□□□□□ -1.44
BdnfP21237 AC079644.1-201ENSMUST00000220586 405 ntBASIC6.05□□□□□ -1.44
BdnfP21237 Gm31711-201ENSMUST00000220687 196 ntBASIC6.05□□□□□ -1.44
BdnfP21237 Gm46996-201ENSMUST00000220924 408 ntBASIC6.05□□□□□ -1.44
BdnfP21237 CT033781.1-201ENSMUST00000223128 454 ntTSL 5 BASIC6.05□□□□□ -1.44
BdnfP21237 CT030705.2-201ENSMUST00000225301 556 ntBASIC6.05□□□□□ -1.44
BdnfP21237 Prl2a1-201ENSMUST00000023602 884 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
BdnfP21237 Rpl37a-201ENSMUST00000059980 558 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
BdnfP21237 Gm10037-201ENSMUST00000060609 315 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
BdnfP21237 1700019A02Rik-201ENSMUST00000072235 646 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
BdnfP21237 Mup13-202ENSMUST00000098042 984 ntAPPRIS P3 TSL 5 BASIC6.05□□□□□ -1.44
BdnfP21237 Defa-ps18-201ENSMUST00000098889 371 ntBASIC6.05□□□□□ -1.44
BdnfP21237 Bex6-201ENSMUST00000099990 764 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
BdnfP21237 4933421A08Rik-201ENSMUST00000135313 1638 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
BdnfP21237 Gm26603-201ENSMUST00000181380 2861 ntTSL 5 BASIC6.05□□□□□ -1.44
BdnfP21237 Nfatc3-206ENSMUST00000212742 3207 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
BdnfP21237 Olfr720-204ENSMUST00000217642 4832 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
BdnfP21237 Abcd2-201ENSMUST00000069511 5527 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
BdnfP21237 Nsun6-202ENSMUST00000076435 3042 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
BdnfP21237 Olfr1389-203ENSMUST00000217595 3549 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
BdnfP21237 Gm42881-201ENSMUST00000198636 3344 ntBASIC6.05□□□□□ -1.44
BdnfP21237 Pramel4-203ENSMUST00000094520 2297 ntAPPRIS P2 TSL 2 BASIC6.05□□□□□ -1.44
BdnfP21237 AC152944.1-201ENSMUST00000220160 3101 ntBASIC6.05□□□□□ -1.44
BdnfP21237 Slc9a4-201ENSMUST00000027233 3962 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
BdnfP21237 Abca15-202ENSMUST00000121265 5335 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
BdnfP21237 Abca15-201ENSMUST00000076272 5335 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
BdnfP21237 Trps1-203ENSMUST00000183421 3446 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
BdnfP21237 Gabrg1-201ENSMUST00000031119 4771 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
BdnfP21237 Vmn2r4-202ENSMUST00000175724 2742 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
BdnfP21237 Gm10825-201ENSMUST00000180537 4478 ntTSL 2 BASIC6.04□□□□□ -1.44
BdnfP21237 Gm26581-201ENSMUST00000181953 4479 ntTSL 2 BASIC6.04□□□□□ -1.44
BdnfP21237 Gm2366-201ENSMUST00000180753 3982 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
BdnfP21237 Atp10b-201ENSMUST00000077659 6825 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
BdnfP21237 Gm19084-201ENSMUST00000222939 1762 ntBASIC6.04□□□□□ -1.44
BdnfP21237 Cxcr6-202ENSMUST00000216072 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
BdnfP21237 Sec61g-202ENSMUST00000109642 691 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
BdnfP21237 Gm649-201ENSMUST00000117284 1054 ntBASIC6.04□□□□□ -1.44
BdnfP21237 Gm11483-201ENSMUST00000119839 247 ntBASIC6.04□□□□□ -1.44
BdnfP21237 Gm5166-201ENSMUST00000121332 573 ntBASIC6.04□□□□□ -1.44
BdnfP21237 2210409E12Rik-201ENSMUST00000122062 346 ntBASIC6.04□□□□□ -1.44
BdnfP21237 Gm15991-201ENSMUST00000127631 942 ntTSL 5 BASIC6.04□□□□□ -1.44
BdnfP21237 C230035I16Rik-201ENSMUST00000141543 623 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
BdnfP21237 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
BdnfP21237 Gm13923-201ENSMUST00000153283 288 ntTSL 3 BASIC6.04□□□□□ -1.44
BdnfP21237 C230035I16Rik-202ENSMUST00000153753 643 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
BdnfP21237 Gm8159-201ENSMUST00000163738 997 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
BdnfP21237 Gm8297-201ENSMUST00000171636 997 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
BdnfP21237 Obox4-ps31-201ENSMUST00000177210 1137 ntBASIC6.04□□□□□ -1.44
BdnfP21237 Gm9556-201ENSMUST00000182938 940 ntBASIC6.04□□□□□ -1.44
BdnfP21237 1700029M03Rik-202ENSMUST00000187517 357 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
BdnfP21237 1810041H14Rik-203ENSMUST00000187773 416 ntTSL 5 BASIC6.04□□□□□ -1.44
BdnfP21237 Ms4a2-205ENSMUST00000189641 647 ntTSL 3 BASIC6.04□□□□□ -1.44
BdnfP21237 Gm42443-201ENSMUST00000198084 1155 ntBASIC6.04□□□□□ -1.44
BdnfP21237 Gm32754-201ENSMUST00000199442 257 ntTSL 5 BASIC6.04□□□□□ -1.44
BdnfP21237 Gm7452-201ENSMUST00000200764 788 ntBASIC6.04□□□□□ -1.44
BdnfP21237 4930513D17Rik-203ENSMUST00000202800 1159 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
BdnfP21237 Olfr1449-202ENSMUST00000208624 1296 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
BdnfP21237 Agr2-201ENSMUST00000020898 784 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
BdnfP21237 Gm34623-201ENSMUST00000210900 977 ntTSL 5 BASIC6.04□□□□□ -1.44
BdnfP21237 Gm8911-201ENSMUST00000213986 652 ntBASIC6.04□□□□□ -1.44
BdnfP21237 E130101E03Rik-201ENSMUST00000214469 1163 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
BdnfP21237 AC129219.1-201ENSMUST00000224336 448 ntBASIC6.04□□□□□ -1.44
BdnfP21237 AC113198.1-201ENSMUST00000226353 832 ntBASIC6.04□□□□□ -1.44
BdnfP21237 Vmn1r38-203ENSMUST00000227694 909 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
BdnfP21237 9530002B09Rik-201ENSMUST00000024032 803 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
BdnfP21237 Olfr780-201ENSMUST00000063168 1025 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
BdnfP21237 Defa17-201ENSMUST00000079528 397 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
BdnfP21237 Mir425-201ENSMUST00000083645 85 ntBASIC6.04□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms