Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm15290-201ENSMUST00000132880 577 ntTSL 3 BASIC4.72□□□□□ -1.65
Sdc1P18828 Gm12301-201ENSMUST00000152963 523 ntTSL 2 BASIC4.72□□□□□ -1.65
Sdc1P18828 Sox5os2-201ENSMUST00000156443 627 ntTSL 3 BASIC4.72□□□□□ -1.65
Sdc1P18828 Gm24545-201ENSMUST00000158651 85 ntBASIC4.72□□□□□ -1.65
Sdc1P18828 Gm23343-201ENSMUST00000158964 143 ntBASIC4.72□□□□□ -1.65
Sdc1P18828 Gm16138-201ENSMUST00000159341 821 ntBASIC4.72□□□□□ -1.65
Sdc1P18828 4430402I18Rik-203ENSMUST00000160542 1057 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Sdc1P18828 4430402I18Rik-206ENSMUST00000164777 1066 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Sdc1P18828 Olfr759-ps1-201ENSMUST00000174238 700 ntBASIC4.72□□□□□ -1.65
Sdc1P18828 9330159M07Rik-203ENSMUST00000181448 602 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Sdc1P18828 Gm27026-201ENSMUST00000183003 892 ntBASIC4.72□□□□□ -1.65
Sdc1P18828 Gm20257-201ENSMUST00000185352 936 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Sdc1P18828 Gm28514-201ENSMUST00000187488 450 ntTSL 2 BASIC4.72□□□□□ -1.65
Sdc1P18828 Gm37265-201ENSMUST00000191698 885 ntBASIC4.72□□□□□ -1.65
Sdc1P18828 Gm38040-201ENSMUST00000193505 225 ntBASIC4.72□□□□□ -1.65
Sdc1P18828 Gm7166-201ENSMUST00000199715 303 ntBASIC4.72□□□□□ -1.65
Sdc1P18828 Chil5-203ENSMUST00000200146 1296 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Sdc1P18828 Gm16571-202ENSMUST00000203839 585 ntTSL 5 BASIC4.72□□□□□ -1.65
Sdc1P18828 4833404L02Rik-201ENSMUST00000206290 908 ntBASIC4.72□□□□□ -1.65
Sdc1P18828 Gm44781-201ENSMUST00000208480 601 ntTSL 3 BASIC4.72□□□□□ -1.65
Sdc1P18828 Gm8911-201ENSMUST00000213986 652 ntBASIC4.72□□□□□ -1.65
Sdc1P18828 AC155922.1-201ENSMUST00000220100 373 ntBASIC4.72□□□□□ -1.65
Sdc1P18828 Gm9292-201ENSMUST00000222008 710 ntBASIC4.72□□□□□ -1.65
Sdc1P18828 Gm41002-201ENSMUST00000222479 312 ntTSL 3 BASIC4.72□□□□□ -1.65
Sdc1P18828 AC139569.1-201ENSMUST00000226080 614 ntBASIC4.72□□□□□ -1.65
Sdc1P18828 AC154627.3-201ENSMUST00000228441 334 ntBASIC4.72□□□□□ -1.65
Sdc1P18828 Ppih-201ENSMUST00000056458 757 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Sdc1P18828 Fam229b-201ENSMUST00000063204 745 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Sdc1P18828 Olfr1085-203ENSMUST00000214566 5129 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Sdc1P18828 Vmn2r115-201ENSMUST00000168175 2574 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Sdc1P18828 Il5ra-202ENSMUST00000204659 3575 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Sdc1P18828 Olfr417-203ENSMUST00000220394 6080 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Sdc1P18828 AC132384.12-201ENSMUST00000219608 4227 ntTSL 5 BASIC4.72□□□□□ -1.65
Sdc1P18828 AC116797.2-201ENSMUST00000224763 4221 ntBASIC4.72□□□□□ -1.65
Sdc1P18828 Abca13-201ENSMUST00000042740 16011 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Sdc1P18828 Gm6645-201ENSMUST00000118505 2726 ntBASIC4.72□□□□□ -1.65
Sdc1P18828 Slco6d1-201ENSMUST00000027575 2328 ntAPPRIS P4 TSL 1 (best) BASIC4.72□□□□□ -1.65
Sdc1P18828 Nfia-201ENSMUST00000052018 9249 ntTSL 5 BASIC4.72□□□□□ -1.65
Sdc1P18828 Rc3h2-202ENSMUST00000112934 8948 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Sdc1P18828 Gm44518-201ENSMUST00000208080 4370 ntBASIC4.72□□□□□ -1.65
Sdc1P18828 Rab30-203ENSMUST00000107180 1406 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Sdc1P18828 Gm44739-201ENSMUST00000205294 1426 ntBASIC4.72□□□□□ -1.65
Sdc1P18828 Gm5605-201ENSMUST00000208940 1305 ntBASIC4.72□□□□□ -1.65
Sdc1P18828 Olfr145-201ENSMUST00000086062 6796 ntAPPRIS P1 BASIC4.71□□□□□ -1.65
Sdc1P18828 Vmn1r171-209ENSMUST00000228228 2863 ntAPPRIS ALT2 BASIC4.71□□□□□ -1.65
Sdc1P18828 Gm37738-201ENSMUST00000192396 4716 ntBASIC4.71□□□□□ -1.65
Sdc1P18828 Zgrf1-202ENSMUST00000195955 3804 ntTSL 2 BASIC4.71□□□□□ -1.65
Sdc1P18828 Olfr1118-202ENSMUST00000216396 4976 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.65
Sdc1P18828 Vmn1r87-204ENSMUST00000228800 1993 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Sdc1P18828 Olfr2-206ENSMUST00000216375 5828 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
Sdc1P18828 Amd1-201ENSMUST00000099945 3204 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Sdc1P18828 Gm14391-204ENSMUST00000109058 1854 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
Sdc1P18828 B530045E10Rik-202ENSMUST00000189035 3138 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Sdc1P18828 Adam28-201ENSMUST00000022642 3110 ntAPPRIS P4 TSL 1 (best) BASIC4.71□□□□□ -1.66
Sdc1P18828 Olfr395-202ENSMUST00000215690 4275 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Sdc1P18828 Filip1l-201ENSMUST00000099667 1576 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Sdc1P18828 Olfr402-202ENSMUST00000216722 3566 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Sdc1P18828 Olfr1263-202ENSMUST00000214382 4400 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Sdc1P18828 Gp6-201ENSMUST00000108590 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
Sdc1P18828 Atp6ap1l-201ENSMUST00000109541 1186 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Sdc1P18828 Gm5751-201ENSMUST00000115561 444 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Sdc1P18828 Cabyr-203ENSMUST00000119108 818 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
Sdc1P18828 Gm6744-201ENSMUST00000119303 543 ntBASIC4.71□□□□□ -1.66
Sdc1P18828 Gm13480-201ENSMUST00000125095 1000 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Sdc1P18828 Grip1os1-202ENSMUST00000135940 1192 ntTSL 5 BASIC4.71□□□□□ -1.66
Sdc1P18828 Fundc1-203ENSMUST00000142638 597 ntTSL 3 BASIC4.71□□□□□ -1.66
Sdc1P18828 Gm13291-201ENSMUST00000143527 655 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Sdc1P18828 1700027A07Rik-201ENSMUST00000150472 458 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Sdc1P18828 Gm7418-201ENSMUST00000162120 801 ntBASIC4.71□□□□□ -1.66
Sdc1P18828 Gm9359-201ENSMUST00000163721 1221 ntBASIC4.71□□□□□ -1.66
Sdc1P18828 Vmn1r9-201ENSMUST00000171186 1051 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Sdc1P18828 Gm45844-201ENSMUST00000173842 451 ntAPPRIS ALT2 TSL 3 BASIC4.71□□□□□ -1.66
Sdc1P18828 Mir6239-201ENSMUST00000183564 105 ntBASIC4.71□□□□□ -1.66
Sdc1P18828 Mir6930-201ENSMUST00000183859 68 ntBASIC4.71□□□□□ -1.66
Sdc1P18828 Gm29161-201ENSMUST00000188250 699 ntBASIC4.71□□□□□ -1.66
Sdc1P18828 1700011B04Rik-201ENSMUST00000189140 651 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Sdc1P18828 Gm17952-201ENSMUST00000193914 747 ntBASIC4.71□□□□□ -1.66
Sdc1P18828 Gm17895-201ENSMUST00000194028 874 ntBASIC4.71□□□□□ -1.66
Sdc1P18828 Ighv8-5-201ENSMUST00000194257 358 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Sdc1P18828 Gm37341-201ENSMUST00000194680 371 ntBASIC4.71□□□□□ -1.66
Sdc1P18828 Gm35013-201ENSMUST00000197218 832 ntBASIC4.71□□□□□ -1.66
Sdc1P18828 Gm43599-201ENSMUST00000202680 528 ntTSL 2 BASIC4.71□□□□□ -1.66
Sdc1P18828 1700013A02Rik-201ENSMUST00000202969 645 ntBASIC4.71□□□□□ -1.66
Sdc1P18828 Gm4585-201ENSMUST00000207218 452 ntBASIC4.71□□□□□ -1.66
Sdc1P18828 Gm9535-201ENSMUST00000218499 768 ntBASIC4.71□□□□□ -1.66
Sdc1P18828 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC4.71□□□□□ -1.66
Sdc1P18828 AC155709.1-201ENSMUST00000218794 162 ntBASIC4.71□□□□□ -1.66
Sdc1P18828 Glrx-202ENSMUST00000220523 493 ntTSL 3 BASIC4.71□□□□□ -1.66
Sdc1P18828 Gm2099-201ENSMUST00000220979 412 ntBASIC4.71□□□□□ -1.66
Sdc1P18828 1700011B04Rik-205ENSMUST00000220995 831 ntTSL 5 BASIC4.71□□□□□ -1.66
Sdc1P18828 1700011B04Rik-207ENSMUST00000221256 800 ntTSL 5 BASIC4.71□□□□□ -1.66
Sdc1P18828 1700011B04Rik-208ENSMUST00000221261 628 ntTSL 5 BASIC4.71□□□□□ -1.66
Sdc1P18828 1700011B04Rik-210ENSMUST00000222668 821 ntTSL 5 BASIC4.71□□□□□ -1.66
Sdc1P18828 Tmem69-201ENSMUST00000069674 974 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
Sdc1P18828 Scimp-201ENSMUST00000074572 617 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Sdc1P18828 Snora9-201ENSMUST00000082579 133 ntBASIC4.71□□□□□ -1.66
Sdc1P18828 Gm7493-201ENSMUST00000085919 626 ntBASIC4.71□□□□□ -1.66
Sdc1P18828 Olfr704-202ENSMUST00000098141 948 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Sdc1P18828 Serpinb9f-201ENSMUST00000075515 1912 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Sdc1P18828 Gm43490-201ENSMUST00000197593 2652 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms