Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Cx3cr1-203ENSMUST00000215016 4493 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Col4a1P02463 Hook3-201ENSMUST00000037182 12836 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Col4a1P02463 Pign-206ENSMUST00000187537 4006 ntTSL 5 BASIC7.05□□□□□ -1.28
Col4a1P02463 Gsdmc-201ENSMUST00000110125 2405 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Col4a1P02463 Olfr610-203ENSMUST00000217627 1643 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Col4a1P02463 Prom1-216ENSMUST00000197750 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Col4a1P02463 Ermn-201ENSMUST00000090940 3635 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Col4a1P02463 Coro2a-203ENSMUST00000107757 4124 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Col4a1P02463 Zkscan1-201ENSMUST00000019660 8261 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Col4a1P02463 Ogt-202ENSMUST00000119299 3840 ntAPPRIS ALT1 TSL 5 BASIC7.05□□□□□ -1.28
Col4a1P02463 Gm42436-201ENSMUST00000198804 3656 ntBASIC7.05□□□□□ -1.28
Col4a1P02463 Ipcef1-203ENSMUST00000105617 6041 ntAPPRIS P3 TSL 5 BASIC7.05□□□□□ -1.28
Col4a1P02463 Epha5-201ENSMUST00000053733 7328 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Col4a1P02463 Hus1-201ENSMUST00000020683 4640 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col4a1P02463 Oscp1-201ENSMUST00000035497 5013 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col4a1P02463 Gm44186-201ENSMUST00000204118 2752 ntBASIC7.04□□□□□ -1.28
Col4a1P02463 Gm37760-201ENSMUST00000194726 3841 ntBASIC7.04□□□□□ -1.28
Col4a1P02463 Magea5-202ENSMUST00000169540 1563 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Col4a1P02463 Rsrc2-203ENSMUST00000111515 4223 ntTSL 5 BASIC7.04□□□□□ -1.28
Col4a1P02463 Gm5594-201ENSMUST00000172712 1429 ntBASIC7.04□□□□□ -1.28
Col4a1P02463 Dcdc2c-204ENSMUST00000189735 1434 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Col4a1P02463 Zfp407-202ENSMUST00000125763 7906 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Col4a1P02463 Cdc27-201ENSMUST00000093923 5425 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col4a1P02463 Prl2b1-202ENSMUST00000102954 870 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col4a1P02463 Cd59b-202ENSMUST00000111130 706 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col4a1P02463 Cd200r3-204ENSMUST00000114612 731 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Col4a1P02463 Gm13991-201ENSMUST00000120190 648 ntBASIC7.04□□□□□ -1.28
Col4a1P02463 Gm13593-201ENSMUST00000121329 692 ntBASIC7.04□□□□□ -1.28
Col4a1P02463 Gm11376-201ENSMUST00000144541 231 ntTSL 5 BASIC7.04□□□□□ -1.28
Col4a1P02463 AY512915-204ENSMUST00000162315 676 ntTSL 3 BASIC7.04□□□□□ -1.28
Col4a1P02463 Cd200r3-210ENSMUST00000171779 1223 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Col4a1P02463 Gm28075-201ENSMUST00000189179 354 ntTSL 3 BASIC7.04□□□□□ -1.28
Col4a1P02463 Gatad1-204ENSMUST00000196304 704 ntTSL 3 BASIC7.04□□□□□ -1.28
Col4a1P02463 BC037156-201ENSMUST00000196993 430 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Col4a1P02463 Gm45908-201ENSMUST00000212977 1177 ntBASIC7.04□□□□□ -1.28
Col4a1P02463 Gm18252-202ENSMUST00000214886 409 ntTSL 5 BASIC7.04□□□□□ -1.28
Col4a1P02463 Rps26-201ENSMUST00000026420 681 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col4a1P02463 Cd200r3-201ENSMUST00000048479 986 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col4a1P02463 Cd200r3-202ENSMUST00000077178 767 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Col4a1P02463 Fpr-rs6-201ENSMUST00000095636 1020 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Col4a1P02463 Gm10799-201ENSMUST00000099666 312 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Col4a1P02463 Armc4-201ENSMUST00000081275 3477 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Col4a1P02463 Gm38372-201ENSMUST00000194854 4028 ntBASIC7.04□□□□□ -1.28
Col4a1P02463 Pdzd2-201ENSMUST00000075317 10756 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Col4a1P02463 Adgrl3-211ENSMUST00000120128 6370 ntTSL 5 BASIC7.04□□□□□ -1.28
Col4a1P02463 Vmn1r39-208ENSMUST00000228919 2105 ntAPPRIS ALT2 BASIC7.04□□□□□ -1.28
Col4a1P02463 Abcb11-202ENSMUST00000102710 4893 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col4a1P02463 Trpm3-206ENSMUST00000099569 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col4a1P02463 Vmn2r124-201ENSMUST00000176802 2568 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Col4a1P02463 AC156031.1-201ENSMUST00000217288 2555 ntBASIC7.04□□□□□ -1.28
Col4a1P02463 Birc6-223ENSMUST00000183224 14562 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
Col4a1P02463 Gm9923-201ENSMUST00000217785 1836 ntBASIC7.04□□□□□ -1.28
Col4a1P02463 Ccdc83-202ENSMUST00000107220 1408 ntAPPRIS ALT2 TSL 2 BASIC7.04□□□□□ -1.28
Col4a1P02463 Gdi2-209ENSMUST00000223396 4303 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col4a1P02463 Iqch-203ENSMUST00000163624 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col4a1P02463 Ccdc187-202ENSMUST00000217256 9411 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
Col4a1P02463 Tnik-205ENSMUST00000160307 4404 ntAPPRIS P4 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col4a1P02463 Rpl36a-ps4-201ENSMUST00000121019 296 ntBASIC7.03□□□□□ -1.28
Col4a1P02463 Gm12267-201ENSMUST00000121609 761 ntBASIC7.03□□□□□ -1.28
Col4a1P02463 Gm22132-201ENSMUST00000175316 100 ntBASIC7.03□□□□□ -1.28
Col4a1P02463 Gm27754-201ENSMUST00000183340 126 ntBASIC7.03□□□□□ -1.28
Col4a1P02463 Gm5-202ENSMUST00000202386 420 ntTSL 3 BASIC7.03□□□□□ -1.28
Col4a1P02463 1810017P11Rik-201ENSMUST00000202592 558 ntBASIC7.03□□□□□ -1.28
Col4a1P02463 Gm15839-202ENSMUST00000211219 664 ntTSL 3 BASIC7.03□□□□□ -1.28
Col4a1P02463 Gm1715-201ENSMUST00000213681 1018 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Col4a1P02463 AC164567.4-201ENSMUST00000219708 483 ntBASIC7.03□□□□□ -1.28
Col4a1P02463 Tpbpa-202ENSMUST00000225275 642 ntAPPRIS ALT2 BASIC7.03□□□□□ -1.28
Col4a1P02463 AC107757.1-201ENSMUST00000226780 357 ntBASIC7.03□□□□□ -1.28
Col4a1P02463 Kcnip4-208ENSMUST00000176978 2189 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col4a1P02463 Olfr1219-204ENSMUST00000215225 5865 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Col4a1P02463 Vmn1r16-202ENSMUST00000227283 5813 ntAPPRIS P2 BASIC7.03□□□□□ -1.28
Col4a1P02463 Nlrp4g-201ENSMUST00000067621 2030 ntBASIC7.03□□□□□ -1.28
Col4a1P02463 Col12a1-201ENSMUST00000071750 11511 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Col4a1P02463 Ap2b1-202ENSMUST00000065692 3269 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Col4a1P02463 Etv1-201ENSMUST00000095767 6576 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col4a1P02463 Zfp619-201ENSMUST00000108015 5969 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col4a1P02463 Gm11346-204ENSMUST00000149751 2893 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Col4a1P02463 Il18r1-206ENSMUST00000195684 2850 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Col4a1P02463 Dtna-203ENSMUST00000220904 3860 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Col4a1P02463 Fbln5-201ENSMUST00000021603 5829 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col4a1P02463 Epb41-201ENSMUST00000030739 6565 ntAPPRIS P3 TSL 5 BASIC7.03□□□□□ -1.28
Col4a1P02463 Vmn1r171-212ENSMUST00000228674 2488 ntAPPRIS ALT2 BASIC7.03□□□□□ -1.28
Col4a1P02463 Luzp1-202ENSMUST00000063021 3775 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col4a1P02463 Gm37913-201ENSMUST00000192925 2544 ntBASIC7.03□□□□□ -1.28
Col4a1P02463 Gm36099-201ENSMUST00000221946 1798 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Col4a1P02463 Vmn1r124-201ENSMUST00000105200 924 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Col4a1P02463 Gmfg-203ENSMUST00000108292 657 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col4a1P02463 Gm12287-201ENSMUST00000119770 707 ntBASIC7.03□□□□□ -1.28
Col4a1P02463 Gm15840-201ENSMUST00000122099 943 ntBASIC7.03□□□□□ -1.28
Col4a1P02463 Gm12701-201ENSMUST00000134206 659 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Col4a1P02463 Gm25962-201ENSMUST00000157173 168 ntBASIC7.03□□□□□ -1.28
Col4a1P02463 Gm16112-201ENSMUST00000159075 382 ntBASIC7.03□□□□□ -1.28
Col4a1P02463 Gm3594-201ENSMUST00000169152 997 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
Col4a1P02463 Ctla2b-202ENSMUST00000171347 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col4a1P02463 Gm23872-201ENSMUST00000175432 77 ntBASIC7.03□□□□□ -1.28
Col4a1P02463 Rps12-ps21-201ENSMUST00000178172 402 ntBASIC7.03□□□□□ -1.28
Col4a1P02463 Ighv3-2-201ENSMUST00000191842 349 ntBASIC7.03□□□□□ -1.28
Col4a1P02463 Ighv1-19-1-201ENSMUST00000192823 351 ntBASIC7.03□□□□□ -1.28
Col4a1P02463 Ighv1-35-201ENSMUST00000195265 351 ntBASIC7.03□□□□□ -1.28
Col4a1P02463 Gm44456-201ENSMUST00000196554 89 ntBASIC7.03□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 89 ms