Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Gm44901-201ENSMUST00000208157 3977 ntBASIC5.97□□□□□ -1.45
Srp54bE9PXC0 Vmn1r181-203ENSMUST00000226978 4371 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Srp54bE9PXC0 Hmmr-201ENSMUST00000020579 3892 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Srp54bE9PXC0 Ptprd-201ENSMUST00000050757 4698 ntTSL 5 BASIC5.96□□□□□ -1.45
Srp54bE9PXC0 Gm28278-201ENSMUST00000185603 1499 ntTSL 5 BASIC5.96□□□□□ -1.45
Srp54bE9PXC0 Gm28279-201ENSMUST00000186248 1493 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
Srp54bE9PXC0 Gm28491-202ENSMUST00000186902 1493 ntTSL 5 BASIC5.96□□□□□ -1.45
Srp54bE9PXC0 Gm29368-201ENSMUST00000187201 1489 ntTSL 5 BASIC5.96□□□□□ -1.45
Srp54bE9PXC0 Gm28088-202ENSMUST00000187402 1493 ntTSL 5 BASIC5.96□□□□□ -1.45
Srp54bE9PXC0 Gm28674-201ENSMUST00000187502 1493 ntTSL 5 BASIC5.96□□□□□ -1.45
Srp54bE9PXC0 Gm28131-203ENSMUST00000187841 1493 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
Srp54bE9PXC0 Gm28487-202ENSMUST00000187894 1493 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
Srp54bE9PXC0 Gm29056-201ENSMUST00000187933 1493 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
Srp54bE9PXC0 Gm29074-203ENSMUST00000188026 1493 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
Srp54bE9PXC0 Gm28754-201ENSMUST00000188778 1493 ntTSL 5 BASIC5.96□□□□□ -1.45
Srp54bE9PXC0 Gm28520-202ENSMUST00000189379 1493 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
Srp54bE9PXC0 Gm29275-202ENSMUST00000189475 1494 ntTSL 5 BASIC5.96□□□□□ -1.45
Srp54bE9PXC0 Gm28963-202ENSMUST00000189567 1493 ntTSL 5 BASIC5.96□□□□□ -1.45
Srp54bE9PXC0 Gm28519-203ENSMUST00000190126 1493 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
Srp54bE9PXC0 Gm29207-202ENSMUST00000190931 1493 ntTSL 5 BASIC5.96□□□□□ -1.45
Srp54bE9PXC0 Gm28310-202ENSMUST00000191136 1493 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
Srp54bE9PXC0 Gm29646-202ENSMUST00000191146 1493 ntTSL 5 BASIC5.96□□□□□ -1.45
Srp54bE9PXC0 Gm28762-203ENSMUST00000191259 1493 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
Srp54bE9PXC0 Gm28691-202ENSMUST00000191561 1493 ntTSL 5 BASIC5.96□□□□□ -1.45
Srp54bE9PXC0 Gm38174-201ENSMUST00000191787 1494 ntTSL 5 BASIC5.96□□□□□ -1.45
Srp54bE9PXC0 Vps50-203ENSMUST00000170873 3687 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
Srp54bE9PXC0 Nlrc4-201ENSMUST00000052124 3838 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Srp54bE9PXC0 Mttp-201ENSMUST00000029805 3963 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Srp54bE9PXC0 Dnah6-204ENSMUST00000204053 12435 ntAPPRIS P2 TSL 5 BASIC5.96□□□□□ -1.46
Srp54bE9PXC0 Lifr-203ENSMUST00000171588 9655 ntAPPRIS P3 TSL 5 BASIC5.96□□□□□ -1.46
Srp54bE9PXC0 Gm18880-201ENSMUST00000223333 1541 ntBASIC5.96□□□□□ -1.46
Srp54bE9PXC0 Serpinb11-201ENSMUST00000027566 2084 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Srp54bE9PXC0 Gm10767-201ENSMUST00000099412 1652 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Srp54bE9PXC0 Mir449c-201ENSMUST00000102192 109 ntBASIC5.96□□□□□ -1.46
Srp54bE9PXC0 Trav14-3-201ENSMUST00000103589 384 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Srp54bE9PXC0 Trav14n-3-201ENSMUST00000103635 280 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Srp54bE9PXC0 Sub1-202ENSMUST00000110504 675 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Srp54bE9PXC0 Gm5073-201ENSMUST00000118222 820 ntBASIC5.96□□□□□ -1.46
Srp54bE9PXC0 Gm13469-201ENSMUST00000118231 350 ntBASIC5.96□□□□□ -1.46
Srp54bE9PXC0 Mgst1-205ENSMUST00000120939 913 ntTSL 3 BASIC5.96□□□□□ -1.46
Srp54bE9PXC0 Crem-207ENSMUST00000126578 915 ntTSL 5 BASIC5.96□□□□□ -1.46
Srp54bE9PXC0 B230112J18Rik-201ENSMUST00000128473 602 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Srp54bE9PXC0 Fundc1-203ENSMUST00000142638 597 ntTSL 3 BASIC5.96□□□□□ -1.46
Srp54bE9PXC0 Gm23662-201ENSMUST00000158046 111 ntBASIC5.96□□□□□ -1.46
Srp54bE9PXC0 Gm2012-202ENSMUST00000163263 892 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Srp54bE9PXC0 Igkv2-95-2-201ENSMUST00000166362 222 ntBASIC5.96□□□□□ -1.46
Srp54bE9PXC0 Cabcoco1-202ENSMUST00000166919 1016 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
Srp54bE9PXC0 Gm6121-202ENSMUST00000167438 893 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Srp54bE9PXC0 Gm3594-201ENSMUST00000169152 997 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
Srp54bE9PXC0 Mir5125-201ENSMUST00000175240 79 ntBASIC5.96□□□□□ -1.46
Srp54bE9PXC0 Esd-208ENSMUST00000177137 853 ntTSL 5 BASIC5.96□□□□□ -1.46
Srp54bE9PXC0 Prp2-202ENSMUST00000178961 951 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Srp54bE9PXC0 Gm7745-201ENSMUST00000182235 973 ntBASIC5.96□□□□□ -1.46
Srp54bE9PXC0 Gm27024-201ENSMUST00000182561 755 ntBASIC5.96□□□□□ -1.46
Srp54bE9PXC0 Olfr1252-201ENSMUST00000186710 1099 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Srp54bE9PXC0 Gm8419-201ENSMUST00000189886 412 ntBASIC5.96□□□□□ -1.46
Srp54bE9PXC0 4930562F17Rik-201ENSMUST00000195279 960 ntTSL 3 BASIC5.96□□□□□ -1.46
Srp54bE9PXC0 Gm39119-201ENSMUST00000208466 951 ntTSL 5 BASIC5.96□□□□□ -1.46
Srp54bE9PXC0 1300002E11Rik-206ENSMUST00000209728 701 ntTSL 2 BASIC5.96□□□□□ -1.46
Srp54bE9PXC0 AC140409.4-201ENSMUST00000215757 538 ntBASIC5.96□□□□□ -1.46
Srp54bE9PXC0 Gm31698-203ENSMUST00000217115 690 ntTSL 5 BASIC5.96□□□□□ -1.46
Srp54bE9PXC0 AC153816.1-201ENSMUST00000217870 764 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Srp54bE9PXC0 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC5.96□□□□□ -1.46
Srp54bE9PXC0 Gm4489-201ENSMUST00000219576 517 ntTSL 2 BASIC5.96□□□□□ -1.46
Srp54bE9PXC0 Glipr1l3-201ENSMUST00000220085 892 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Srp54bE9PXC0 CT010456.3-201ENSMUST00000221210 523 ntTSL 5 BASIC5.96□□□□□ -1.46
Srp54bE9PXC0 Gm46401-201ENSMUST00000221291 1089 ntTSL 5 BASIC5.96□□□□□ -1.46
Srp54bE9PXC0 Gm11360-201ENSMUST00000221898 262 ntBASIC5.96□□□□□ -1.46
Srp54bE9PXC0 AC121137.1-201ENSMUST00000225272 602 ntBASIC5.96□□□□□ -1.46
Srp54bE9PXC0 Olfr730-201ENSMUST00000051453 957 ntAPPRIS P2 BASIC5.96□□□□□ -1.46
Srp54bE9PXC0 Olfr1404-201ENSMUST00000056592 1034 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Srp54bE9PXC0 Cdh17-202ENSMUST00000108303 3287 ntTSL 2 BASIC5.96□□□□□ -1.46
Srp54bE9PXC0 Olfr1273-ps-201ENSMUST00000214356 4698 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.46
Srp54bE9PXC0 Gm37775-201ENSMUST00000194120 2313 ntBASIC5.96□□□□□ -1.46
Srp54bE9PXC0 Erap1-201ENSMUST00000169114 5644 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Srp54bE9PXC0 Foxp2-204ENSMUST00000115472 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Srp54bE9PXC0 Cenpw-202ENSMUST00000216853 4143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Srp54bE9PXC0 Acad11-202ENSMUST00000120854 3108 ntTSL 5 BASIC5.95□□□□□ -1.46
Srp54bE9PXC0 Zfp426-208ENSMUST00000166005 1653 ntAPPRIS P3 TSL 5 BASIC5.95□□□□□ -1.46
Srp54bE9PXC0 Gm44102-201ENSMUST00000204031 1666 ntBASIC5.95□□□□□ -1.46
Srp54bE9PXC0 AA792892-202ENSMUST00000202253 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Srp54bE9PXC0 Vmn2r97-201ENSMUST00000168710 2586 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Srp54bE9PXC0 Dock2-203ENSMUST00000101365 3785 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Srp54bE9PXC0 Zranb3-201ENSMUST00000086614 4210 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Srp54bE9PXC0 Gm10603-202ENSMUST00000184420 4520 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Srp54bE9PXC0 Grin2b-201ENSMUST00000053880 24060 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Srp54bE9PXC0 Gm10373-201ENSMUST00000100683 668 ntTSL 2 BASIC5.95□□□□□ -1.46
Srp54bE9PXC0 Olfr1196-201ENSMUST00000104892 945 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Srp54bE9PXC0 Ccdc7b-203ENSMUST00000108745 1047 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Srp54bE9PXC0 Dynlt1-ps1-201ENSMUST00000117045 342 ntBASIC5.95□□□□□ -1.46
Srp54bE9PXC0 Gm12077-201ENSMUST00000117049 364 ntBASIC5.95□□□□□ -1.46
Srp54bE9PXC0 Mrps36-ps2-201ENSMUST00000118658 309 ntBASIC5.95□□□□□ -1.46
Srp54bE9PXC0 Gm12813-201ENSMUST00000119615 902 ntBASIC5.95□□□□□ -1.46
Srp54bE9PXC0 Mup-ps28-201ENSMUST00000120686 289 ntBASIC5.95□□□□□ -1.46
Srp54bE9PXC0 Pttg1-206ENSMUST00000121638 948 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Srp54bE9PXC0 Gm25782-201ENSMUST00000122526 289 ntBASIC5.95□□□□□ -1.46
Srp54bE9PXC0 Gm16135-201ENSMUST00000129470 568 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Srp54bE9PXC0 1700095A21Rik-201ENSMUST00000145269 1069 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Srp54bE9PXC0 Gm24731-201ENSMUST00000158227 131 ntBASIC5.95□□□□□ -1.46
Srp54bE9PXC0 Gm16139-201ENSMUST00000160015 420 ntBASIC5.95□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms