Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Syt4-201ENSMUST00000025110 3901 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Upk3aQ9JKX8 Vmn1r220-203ENSMUST00000227679 7868 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Upk3aQ9JKX8 Vmn1r220-206ENSMUST00000228854 7854 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Upk3aQ9JKX8 Vmn1r44-205ENSMUST00000226345 1965 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
Upk3aQ9JKX8 Sspo-202ENSMUST00000169350 15571 ntAPPRIS P2 TSL 5 BASIC5.65□□□□□ -1.5
Upk3aQ9JKX8 Tlr4-201ENSMUST00000048096 4077 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Upk3aQ9JKX8 Arhgap15-201ENSMUST00000055776 2604 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Upk3aQ9JKX8 Fmn1-202ENSMUST00000099576 11817 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
Upk3aQ9JKX8 Slc39a12-201ENSMUST00000082290 2675 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Upk3aQ9JKX8 Nlgn1-203ENSMUST00000191835 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
Upk3aQ9JKX8 Ska2-201ENSMUST00000020794 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Upk3aQ9JKX8 Gm3278-201ENSMUST00000164459 1500 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Upk3aQ9JKX8 Lipn-201ENSMUST00000025682 1502 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Upk3aQ9JKX8 Cbx5-201ENSMUST00000108813 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Upk3aQ9JKX8 Serpinb9-202ENSMUST00000063191 3472 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Upk3aQ9JKX8 Gm22372-201ENSMUST00000104589 136 ntBASIC5.65□□□□□ -1.5
Upk3aQ9JKX8 Gm13428-201ENSMUST00000117540 365 ntBASIC5.65□□□□□ -1.5
Upk3aQ9JKX8 Mageb16-ps1-201ENSMUST00000117991 1127 ntBASIC5.65□□□□□ -1.5
Upk3aQ9JKX8 Gm12985-201ENSMUST00000118376 183 ntBASIC5.65□□□□□ -1.5
Upk3aQ9JKX8 Gm13679-201ENSMUST00000118678 484 ntBASIC5.65□□□□□ -1.5
Upk3aQ9JKX8 Gm15400-201ENSMUST00000118944 601 ntBASIC5.65□□□□□ -1.5
Upk3aQ9JKX8 Gm15660-201ENSMUST00000118997 478 ntBASIC5.65□□□□□ -1.5
Upk3aQ9JKX8 Gm12322-201ENSMUST00000121605 389 ntBASIC5.65□□□□□ -1.5
Upk3aQ9JKX8 Olfr118-201ENSMUST00000122036 966 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Upk3aQ9JKX8 Gm14808-201ENSMUST00000129259 361 ntTSL 3 BASIC5.65□□□□□ -1.5
Upk3aQ9JKX8 Gm17206-201ENSMUST00000168123 577 ntTSL 5 BASIC5.65□□□□□ -1.5
Upk3aQ9JKX8 Gm26972-201ENSMUST00000183218 344 ntTSL 3 BASIC5.65□□□□□ -1.5
Upk3aQ9JKX8 Mir6921-201ENSMUST00000183719 80 ntBASIC5.65□□□□□ -1.5
Upk3aQ9JKX8 Eloc-206ENSMUST00000186948 641 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
Upk3aQ9JKX8 Gm42776-201ENSMUST00000198031 406 ntBASIC5.65□□□□□ -1.5
Upk3aQ9JKX8 Gm43055-201ENSMUST00000198859 879 ntTSL 3 BASIC5.65□□□□□ -1.5
Upk3aQ9JKX8 4833403J16Rik-201ENSMUST00000204490 1031 ntBASIC5.65□□□□□ -1.5
Upk3aQ9JKX8 Gm5831-201ENSMUST00000216016 1209 ntBASIC5.65□□□□□ -1.5
Upk3aQ9JKX8 AL669819.1-201ENSMUST00000225143 330 ntBASIC5.65□□□□□ -1.5
Upk3aQ9JKX8 Otor-201ENSMUST00000028902 949 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Upk3aQ9JKX8 Gm22126-201ENSMUST00000083244 142 ntBASIC5.65□□□□□ -1.5
Upk3aQ9JKX8 n-R5s161-201ENSMUST00000083728 114 ntBASIC5.65□□□□□ -1.5
Upk3aQ9JKX8 Fpr-rs4-201ENSMUST00000095651 972 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Upk3aQ9JKX8 Gm37249-201ENSMUST00000195185 2869 ntBASIC5.65□□□□□ -1.5
Upk3aQ9JKX8 Gm37082-201ENSMUST00000192629 1927 ntBASIC5.65□□□□□ -1.51
Upk3aQ9JKX8 Senp7-203ENSMUST00000089362 4825 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.51
Upk3aQ9JKX8 Mug4-ps-201ENSMUST00000203118 3578 ntBASIC5.65□□□□□ -1.51
Upk3aQ9JKX8 Sh3kbp1-202ENSMUST00000080394 2980 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Upk3aQ9JKX8 Olfr39-202ENSMUST00000212983 2028 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
Upk3aQ9JKX8 Prom1-216ENSMUST00000197750 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
Upk3aQ9JKX8 Klrb1f-201ENSMUST00000032257 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Upk3aQ9JKX8 Nlrp5-201ENSMUST00000015866 3508 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.51
Upk3aQ9JKX8 Gabra6-203ENSMUST00000155218 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
Upk3aQ9JKX8 Gm37703-201ENSMUST00000192292 1784 ntBASIC5.65□□□□□ -1.51
Upk3aQ9JKX8 BC065397-203ENSMUST00000134066 3201 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Upk3aQ9JKX8 A330015K06Rik-202ENSMUST00000195685 2196 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Upk3aQ9JKX8 Gm38372-201ENSMUST00000194854 4028 ntBASIC5.64□□□□□ -1.51
Upk3aQ9JKX8 Gm45426-201ENSMUST00000209393 3672 ntBASIC5.64□□□□□ -1.51
Upk3aQ9JKX8 Gm14496-201ENSMUST00000071760 2550 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Upk3aQ9JKX8 Spata6-203ENSMUST00000084354 2239 ntTSL 5 BASIC5.64□□□□□ -1.51
Upk3aQ9JKX8 Ppp2r3a-201ENSMUST00000066773 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Upk3aQ9JKX8 Gm45632-201ENSMUST00000211532 1888 ntBASIC5.64□□□□□ -1.51
Upk3aQ9JKX8 Gm28320-201ENSMUST00000187777 2273 ntBASIC5.64□□□□□ -1.51
Upk3aQ9JKX8 Car5b-201ENSMUST00000033739 3436 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Upk3aQ9JKX8 Olfr1336-202ENSMUST00000214301 6882 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Upk3aQ9JKX8 Csde1-214ENSMUST00000199240 3457 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Upk3aQ9JKX8 Gm38322-201ENSMUST00000194074 2300 ntBASIC5.64□□□□□ -1.51
Upk3aQ9JKX8 Gm38126-201ENSMUST00000195297 4003 ntBASIC5.64□□□□□ -1.51
Upk3aQ9JKX8 Taf13-204ENSMUST00000143054 2443 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Upk3aQ9JKX8 Xpo7-203ENSMUST00000226448 3663 ntBASIC5.64□□□□□ -1.51
Upk3aQ9JKX8 Stag3-209ENSMUST00000162245 4123 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Upk3aQ9JKX8 Rbms3-206ENSMUST00000111773 7908 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Upk3aQ9JKX8 Ear1-201ENSMUST00000100691 713 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Upk3aQ9JKX8 Ighv5-9-1-201ENSMUST00000103452 350 ntAPPRIS ALT2 BASIC5.64□□□□□ -1.51
Upk3aQ9JKX8 Mup3-202ENSMUST00000107472 916 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Upk3aQ9JKX8 Usp17le-ps-201ENSMUST00000117954 957 ntBASIC5.64□□□□□ -1.51
Upk3aQ9JKX8 Gm13866-201ENSMUST00000118901 968 ntBASIC5.64□□□□□ -1.51
Upk3aQ9JKX8 Gm16423-201ENSMUST00000120078 947 ntBASIC5.64□□□□□ -1.51
Upk3aQ9JKX8 Gm15331-201ENSMUST00000120225 385 ntBASIC5.64□□□□□ -1.51
Upk3aQ9JKX8 Fam229b-202ENSMUST00000124941 721 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Upk3aQ9JKX8 Gm23279-201ENSMUST00000157912 97 ntBASIC5.64□□□□□ -1.51
Upk3aQ9JKX8 Gm25246-201ENSMUST00000175476 69 ntBASIC5.64□□□□□ -1.51
Upk3aQ9JKX8 Vmn2r-ps4-201ENSMUST00000176989 1015 ntBASIC5.64□□□□□ -1.51
Upk3aQ9JKX8 S100a2-201ENSMUST00000179550 315 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Upk3aQ9JKX8 Gm27006-201ENSMUST00000182218 943 ntBASIC5.64□□□□□ -1.51
Upk3aQ9JKX8 Gm37716-201ENSMUST00000193553 947 ntBASIC5.64□□□□□ -1.51
Upk3aQ9JKX8 Gm19739-201ENSMUST00000195941 153 ntBASIC5.64□□□□□ -1.51
Upk3aQ9JKX8 C030018K13Rik-201ENSMUST00000196527 866 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Upk3aQ9JKX8 Gm43616-201ENSMUST00000199347 409 ntTSL 3 BASIC5.64□□□□□ -1.51
Upk3aQ9JKX8 Olfr812-202ENSMUST00000203571 1232 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
Upk3aQ9JKX8 Gm5735-201ENSMUST00000207053 167 ntBASIC5.64□□□□□ -1.51
Upk3aQ9JKX8 Gm45259-201ENSMUST00000209217 1006 ntBASIC5.64□□□□□ -1.51
Upk3aQ9JKX8 Gm45596-201ENSMUST00000209279 434 ntBASIC5.64□□□□□ -1.51
Upk3aQ9JKX8 Gm45334-201ENSMUST00000211118 1227 ntTSL 5 BASIC5.64□□□□□ -1.51
Upk3aQ9JKX8 Gm9685-201ENSMUST00000211275 538 ntBASIC5.64□□□□□ -1.51
Upk3aQ9JKX8 Gm31432-201ENSMUST00000214727 538 ntTSL 5 BASIC5.64□□□□□ -1.51
Upk3aQ9JKX8 A330049N07Rik-202ENSMUST00000219920 587 ntTSL 5 BASIC5.64□□□□□ -1.51
Upk3aQ9JKX8 AC156559.2-201ENSMUST00000224403 384 ntBASIC5.64□□□□□ -1.51
Upk3aQ9JKX8 AC125405.1-201ENSMUST00000226406 589 ntBASIC5.64□□□□□ -1.51
Upk3aQ9JKX8 AC124709.3-201ENSMUST00000227294 171 ntBASIC5.64□□□□□ -1.51
Upk3aQ9JKX8 4931400O07Rik-201ENSMUST00000033537 647 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Upk3aQ9JKX8 Olfr148-201ENSMUST00000050807 1017 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Upk3aQ9JKX8 Olfr1175-ps-201ENSMUST00000214207 5552 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Upk3aQ9JKX8 Ccl9-201ENSMUST00000019266 3006 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Upk3aQ9JKX8 Mef2c-203ENSMUST00000185052 3556 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms